Literature DB >> 35092504

Immune microenvironment-related gene mapping predicts immunochemotherapy response and prognosis in diffuse large B-cell lymphoma.

Wanjun Chen1, Weijie Liang2, Yongjian He3, Chixiang Liu1, Hongtian Chen1, Piao Lv1, Yuan Yao1, Huayou Zhou4.   

Abstract

Diffuse large B-cell lymphoma (DLBCL) is the most common subtype of non-Hodgkin's lymphoma (NHL). The R-CHOP immunochemotherapy regimen is the first-line treatment option for DLBCL patients and has greatly improved the prognosis of DLBCL, making it a curable disease. However, drug resistance or relapse is the main challenge for current DLBCL treatment. Studies have shown that the tumor microenvironment plays an important role in the onset, development, and responsiveness to drugs in DLBCL. Here, we used the CIBERSORT algorithm to resolve the composition of the immune microenvironment of 471 DLBCL patients from the GEO database. We found that activated memory CD4+ T cells and γδ T cells were significantly associated with immunochemotherapy response. Weighted gene co-expression networks (WGCNA) were constructed using differentially expressed genes from immunochemotherapy responders and non-responders. The module most associated with these two types of T cells was defined as hub module. Enrichment analysis of the hub module showed that baseline immune status was significantly stronger in responders than in non-responders. A protein-protein interaction (PPI) network was constructed for hub module to identify hub genes. After survival analysis, five prognosis-related genes (CD3G, CD3D, GNB4, FCHO2, GPR183) were identified and all these genes were significantly negatively associated with PD1. Using our own patient cohort, we validated the efficacy of CD3G and CD3D in predicting immunochemotherapy response. Our study showed that CD3G, CD3D, GNB4, FCHO2, and GPR183 are involved in the regulation of the immune microenvironment of DLBCL. They can be used as biomarkers for predicting immunochemotherapy response and potential therapeutic targets in DLBCL.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Bioinformatics; Diffuse large B-cell lymphoma; Immune microenvironment; Immunochemotherapy response; Prognosis

Mesh:

Substances:

Year:  2022        PMID: 35092504     DOI: 10.1007/s12032-021-01642-3

Source DB:  PubMed          Journal:  Med Oncol        ISSN: 1357-0560            Impact factor:   3.064


  61 in total

1.  Outcomes in refractory diffuse large B-cell lymphoma: results from the international SCHOLAR-1 study.

Authors:  Michael Crump; Sattva S Neelapu; Umar Farooq; Eric Van Den Neste; John Kuruvilla; Jason Westin; Brian K Link; Annette Hay; James R Cerhan; Liting Zhu; Sami Boussetta; Lei Feng; Matthew J Maurer; Lynn Navale; Jeff Wiezorek; William Y Go; Christian Gisselbrecht
Journal:  Blood       Date:  2017-08-03       Impact factor: 22.113

Review 2.  The tumor microenvironment shapes hallmarks of mature B-cell malignancies.

Authors:  K H Shain; W S Dalton; J Tao
Journal:  Oncogene       Date:  2015-02-02       Impact factor: 9.867

3.  Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling.

Authors:  A A Alizadeh; M B Eisen; R E Davis; C Ma; I S Lossos; A Rosenwald; J C Boldrick; H Sabet; T Tran; X Yu; J I Powell; L Yang; G E Marti; T Moore; J Hudson; L Lu; D B Lewis; R Tibshirani; G Sherlock; W C Chan; T C Greiner; D D Weisenburger; J O Armitage; R Warnke; R Levy; W Wilson; M R Grever; J C Byrd; D Botstein; P O Brown; L M Staudt
Journal:  Nature       Date:  2000-02-03       Impact factor: 49.962

4.  Genetically predicted levels of circulating cytokines and prostate cancer risk: A Mendelian randomization study.

Authors:  Xiaohui Sun; Ding Ye; Lingbin Du; Yu Qian; Xia Jiang; Yingying Mao
Journal:  Int J Cancer       Date:  2020-08-12       Impact factor: 7.396

Review 5.  Diffuse large B-cell lymphoma: optimizing outcome in the context of clinical and biologic heterogeneity.

Authors:  Laurie H Sehn; Randy D Gascoyne
Journal:  Blood       Date:  2014-12-11       Impact factor: 22.113

6.  Confirmation of the molecular classification of diffuse large B-cell lymphoma by immunohistochemistry using a tissue microarray.

Authors:  Christine P Hans; Dennis D Weisenburger; Timothy C Greiner; Randy D Gascoyne; Jan Delabie; German Ott; H Konrad Müller-Hermelink; Elias Campo; Rita M Braziel; Elaine S Jaffe; Zenggang Pan; Pedro Farinha; Lynette M Smith; Brunangelo Falini; Alison H Banham; Andreas Rosenwald; Louis M Staudt; Joseph M Connors; James O Armitage; Wing C Chan
Journal:  Blood       Date:  2003-09-22       Impact factor: 22.113

7.  The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma.

Authors:  Andreas Rosenwald; George Wright; Wing C Chan; Joseph M Connors; Elias Campo; Richard I Fisher; Randy D Gascoyne; H Konrad Muller-Hermelink; Erlend B Smeland; Jena M Giltnane; Elaine M Hurt; Hong Zhao; Lauren Averett; Liming Yang; Wyndham H Wilson; Elaine S Jaffe; Richard Simon; Richard D Klausner; John Powell; Patricia L Duffey; Dan L Longo; Timothy C Greiner; Dennis D Weisenburger; Warren G Sanger; Bhavana J Dave; James C Lynch; Julie Vose; James O Armitage; Emilio Montserrat; Armando López-Guillermo; Thomas M Grogan; Thomas P Miller; Michel LeBlanc; German Ott; Stein Kvaloy; Jan Delabie; Harald Holte; Peter Krajci; Trond Stokke; Louis M Staudt
Journal:  N Engl J Med       Date:  2002-06-20       Impact factor: 91.245

8.  T-cell inflamed tumor microenvironment predicts favorable prognosis in primary testicular lymphoma.

Authors:  Suvi-Katri Leivonen; Marjukka Pollari; Oscar Brück; Teijo Pellinen; Matias Autio; Marja-Liisa Karjalainen-Lindsberg; Susanna Mannisto; Pirkko-Liisa Kellokumpu-Lehtinen; Olli Kallioniemi; Satu Mustjoki; Sirpa Leppä
Journal:  Haematologica       Date:  2018-09-20       Impact factor: 9.941

Review 9.  The Tumor Microenvironment of DLBCL in the Computational Era.

Authors:  Giuseppina Opinto; Maria Carmela Vegliante; Antonio Negri; Tetiana Skrypets; Giacomo Loseto; Stefano Aldo Pileri; Attilio Guarini; Sabino Ciavarella
Journal:  Front Oncol       Date:  2020-03-31       Impact factor: 6.244

Review 10.  Cancer-Associated Angiogenesis: The Endothelial Cell as a Checkpoint for Immunological Patrolling.

Authors:  Antonio Giovanni Solimando; Simona De Summa; Angelo Vacca; Domenico Ribatti
Journal:  Cancers (Basel)       Date:  2020-11-15       Impact factor: 6.639

View more
  1 in total

1.  CD3D Is an Independent Prognostic Factor and Correlates With Immune Infiltration in Gastric Cancer.

Authors:  Li Yuan; Jingli Xu; Yunfu Shi; Zhiyuan Jin; Zhehan Bao; Pengcheng Yu; Yi Wang; Yuhang Xia; Jiangjiang Qin; Bo Zhang; Qinghua Yao
Journal:  Front Oncol       Date:  2022-06-01       Impact factor: 5.738

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.