Literature DB >> 35084577

Epigenetics of wheat-rust interaction: an update.

Rajni Kant Thakur1, Pramod Prasad2, S C Bhardwaj3, O P Gangwar1, Subodh Kumar1.   

Abstract

MAIN
CONCLUSION: The outcome of different host-pathogen interactions is influenced by both genetic and epigenetic systems, which determine the response of plants to pathogens and vice versa. This review highlights key molecular mechanisms and conceptual advances involved in epigenetic research and the progress made in epigenetics of wheat-rust interactions. Epigenetics implies the heritable changes in the way of gene expression as a consequence of the modification of DNA bases, histone proteins, and/or non-coding-RNA biogenesis without disturbing the underlying nucleotide sequence. The changes occurring between DNA and its surrounding chromatin without altering its DNA sequence and leading to significant changes in the genome of any organism are called epigenetic changes. Epigenetics has already been used successfully to explain the mechanism of human pathogens and in the identification of pathogen-induced modifications within various host plants. Wheat rusts are one of the most vital fungal diseases throughout the major wheat-growing areas of the world. The epigenome in plant pathogens causing diseases such as wheat rusts is mysterious. The investigations of host and pathogen epigenetics in the wheat rusts system can offer a piece of suitable evidence for elucidation of the molecular basis of host-pathogen interaction. Besides, the information on the epigenetic regulation of the genes involved in resistance or pathogenicity will provide better insights into the complex resistance signaling pathways and could provide answers to certain key questions, such as whether epigenetic regulation of certain genes is imparting resistance to host in response of certain pathogen elicitors or not. In the last few years, there has been an upsurge in research on the host as well as pathogen epigenetics and its outcome in plant-pathogen interactions. This review summarizes the progress made in the areas related to the epigenetic control of host-pathogen interaction with particular emphasis on wheat rusts.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Bisulfite sequencing; Chromatin immunoprecipitation; DNA methylation; Epigenetics; Histone modification; Rust; Wheat

Mesh:

Year:  2022        PMID: 35084577     DOI: 10.1007/s00425-022-03829-y

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  130 in total

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Review 3.  Regulation of chromatin by histone modifications.

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4.  Resistance gene cloning from a wild crop relative by sequence capture and association genetics.

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Journal:  Nat Biotechnol       Date:  2019-02-04       Impact factor: 54.908

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Authors:  Conchita Alonso; Ricardo Pérez; Pilar Bazaga; Mónica Medrano; Carlos M Herrera
Journal:  Am J Bot       Date:  2014-08-11       Impact factor: 3.844

6.  Static magnetic field induced epigenetic changes in wheat callus.

Authors:  Murat Aydin; Mahmut Sinan Taspinar; Zeynep Elibol Cakmak; Rahmi Dumlupinar; Guleray Agar
Journal:  Bioelectromagnetics       Date:  2016-08-11       Impact factor: 2.010

Review 7.  Epigenetic Regulation of Chromatin States in Schizosaccharomyces pombe.

Authors:  Robin C Allshire; Karl Ekwall
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-07-01       Impact factor: 10.005

8.  Formaldehyde-assisted isolation of regulatory DNA elements from Arabidopsis leaves.

Authors:  Stephani Baum; Eva-Maria Reimer-Michalski; Michal R Jaskiewicz; Uwe Conrath
Journal:  Nat Protoc       Date:  2020-02-10       Impact factor: 13.491

Review 9.  Neurospora crassa, a model system for epigenetics research.

Authors:  Rodolfo Aramayo; Eric U Selker
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-10-01       Impact factor: 10.005

10.  An immunity-triggering effector from the Barley smut fungus Ustilago hordei resides in an Ustilaginaceae-specific cluster bearing signs of transposable element-assisted evolution.

Authors:  Shawkat Ali; John D Laurie; Rob Linning; José Antonio Cervantes-Chávez; Denis Gaudet; Guus Bakkeren
Journal:  PLoS Pathog       Date:  2014-07-03       Impact factor: 6.823

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