| Literature DB >> 35075364 |
Xia Du1,2, Zhibiao Di1, Yang Liu1, Wenbing Zhi1, Yuan Liu1, Hong Zhang1, Feng Liu3,4.
Abstract
Toutongning capsule (TTNC) is an effective and safe traditional Chinese medicine used in the treatment of migraine. In this present study, a multiscale strategy was used to systematically investigate the mechanism of TTNC in treating migraine, which contained UPLC-UESI-Q Exactive Focus network pharmacology and experimental verification. First, 88 compounds were identified by the UPLC-UESI-Q Exactive Focus method for TTNC. Then, the target fishing for these compounds was performed by means of an efficient drug similarity search tool. Third, a series of network pharmacology experiments were performed to predict the key compounds, targets, and pathways. They were protein-protein interaction (PPI), KEGG pathway enrichment analysis, and herbs-compounds-targets-pathways (H-C-T-P) network construction. As a result, 18 potential key compounds, 20 potential key targets, and 6 potential signaling pathways were obtained for TTNC in treatment with migraine. Finally, molecular docking and experimental were carried out to verify the key targets. In short, the results showed that TTNC is able to treat migraine through multiple components, multiple targets, and multiple pathways. This work may provide a theoretical basis for further research on the molecular mechanism of TTNC in the treatment of migraine.Entities:
Year: 2022 PMID: 35075364 PMCID: PMC8783712 DOI: 10.1155/2022/5528845
Source DB: PubMed Journal: Evid Based Complement Alternat Med ISSN: 1741-427X Impact factor: 2.629
Figure 1The detailed flowchart for TTNC in the treatment of migraine.
Figure 2The total ion flow diagram of TTN. (a) The positive ion mode. (b) The negative ion mode.
Figure 3The results of Venn analysis, protein-protein interaction (PPI), and the KEGG pathway enrichment analysis. (a) The Venn's diagrams between the component targets for TTNC and disease targets for migraine. (b) The PPI network for TTNC in treatment with migraine. (c) The results of KEGG pathway enrichment analysis for TTNC in treatment with migraine.
Figure 4The herbs-compounds-targets-pathways (H-C-T-P) network for TTNC in treatment with migraine.
The degree centrality (DC), betweenness centrality (BC), and closeness centrality (CC) values of the key compounds for TTNC in treating migraine.
| No. | Compound name | Source | CC | DC | BC |
|---|---|---|---|---|---|
| 1 | Adenosine | Gastrodiae Rhizoma | 0.4257 | 43 | 0.4103 |
| 2 | Paeonol | Angelicae Sinensis Radix | 0.3326 | 12 | 0.0750 |
| 3 | Resveratrol | Smilacis Glabrae Rhizoma | 0.3435 | 9 | 0.0334 |
| 4 | Emodin | Polygoni Multiflori Radix | 0.3501 | 7 | 0.0374 |
| 5 | Physcion | Polygoni Multiflori Radix | 0.2792 | 7 | 0.0231 |
| 6 | Astilbin | Smilacis Glabrae Rhizoma | 0.3468 | 6 | 0.0111 |
| 7 | Baicalin | Angelicae Sinensis Radix | 0.3623 | 6 | 0.0333 |
| 8 | Engeletin | Smilacis Glabrae Rhizoma | 0.3468 | 6 | 0.0111 |
| 9 | Epicatechin | Polygoni Multiflori Radix | 0.3468 | 6 | 0.0101 |
| 10 | Epigallocatechin | Polygoni Multiflori Radix | 0.3468 | 6 | 0.0101 |
| 11 | Ferulaldehyde | Angelicae Sinensis Radix | 0.2961 | 6 | 0.0161 |
| 12 | Homoorientin | Smilacis Glabrae Rhizoma | 0.3341 | 6 | 0.0078 |
| 13 | Kaempferol | Polygoni Multiflori Radix | 0.3468 | 6 | 0.0101 |
| 14 | Luteolin | Polygoni Multiflori Radix | 0.3468 | 6 | 0.0101 |
| 15 | Naringenin | Polygoni Multiflori Radix | 0.3468 | 6 | 0.0101 |
| 16 | Quercetin | Angelicae Sinensis Radix | 0.3518 | 6 | 0.0282 |
| 17 | Taxifolin | Smilacis Glabrae Rhizoma | 0.3372 | 6 | 0.0061 |
| 18 | Vanillin | Angelicae Sinensis Radix | 0.3587 | 6 | 0.0290 |
The degree centrality (DC), betweenness centrality (BC), and closeness centrality (CC) values of the key targets for TTNC in treating migraine.
| No. | Gene name | Target name | CC | DC | BC |
|---|---|---|---|---|---|
| 1 | AKT1 | AKT serine/threonine kinase 1 | 0.4345 | 24 | 0.1875 |
| 2 | ESR1 | Estrogen receptor 1 | 0.3544 | 20 | 0.0592 |
| 3 | ESR2 | Estrogen receptor 2 | 0.3427 | 18 | 0.0394 |
| 4 | AR | Androgen receptor | 0.3318 | 18 | 0.0887 |
| 5 | DNMT1 | DNA methyltransferase 1 | 0.3862 | 18 | 0.1141 |
| 6 | HRAS | HRas proto-oncogene, GTPase | 0.3596 | 11 | 0.0450 |
| 7 | CYP19A1 | Cytochrome P450 family 19 subfamily a member 1 | 0.2967 | 10 | 0.0123 |
| 8 | NOS1 | Nitric oxide synthase, brain | 0.3782 | 10 | 0.0583 |
| 9 | HTR1F | 5-Hydroxytryptamine receptor 1F | 0.2908 | 9 | 0.0112 |
| 10 | HTR2A | 5-Hydroxytryptamine receptor 2A | 0.2920 | 9 | 0.0192 |
| 11 | PIK3CA | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform | 0.3510 | 9 | 0.0241 |
| 12 | PTGS2 | Prostaglandin G/H synthase 2 | 0.3349 | 9 | 0.0471 |
| 13 | CREB1 | Cyclic AMP-responsive element-binding protein 1 | 0.3460 | 8 | 0.0187 |
| 14 | HTR1A | 5-Hydroxytryptamine receptor 1A | 0.3042 | 8 | 0.0220 |
| 15 | INS | Insulin | 0.2920 | 7 | 0.0089 |
| 16 | SRC | Proto-oncogene tyrosine-protein kinase Src | 0.3333 | 7 | 0.0160 |
| 17 | DRD2 | D(2) dopamine receptor | 0.3364 | 6 | 0.0205 |
| 18 | EDNRA | Endothelin-1 receptor | 0.3160 | 6 | 0.0127 |
| 19 | IGF1R | Insulin-like growth factor 1 receptor | 0.3318 | 6 | 0.0117 |
| 20 | INSR | Insulin receptor | 0.3333 | 6 | 0.0105 |
The degree centrality (DC), betweenness centrality (BC), and closeness centrality (CC) values of the key pathways for TTNC in treating migraine.
| No. | Pathway | Targets | CC | DC | BC |
|---|---|---|---|---|---|
| 1 | cAMP signaling pathway | ADORA1, AKT1, CFTR, CREB1, DRD2, EDNRA, HTR1A, HTR1F, NFKB1, NFKBIA, PIK3CA, PPARA | 0.3436 | 12 | 0.0524 |
| 2 | Retrograde endocannabinoid signaling | ND1, ND2, ND3, ND4, ND4L, ND5, ND6, NDUFA1, NDUFB3, NDUFB8, NDUFV2, PTGS2 | 0.3085 | 12 | 0.0321 |
| 3 | PI3K-Akt signaling pathway | AKT1, CREB1, EGF, HRAS, IGF1R, IL4, INS, INSR, ITGB3, NFKB1, PIK3CA, TP53 | 0.3356 | 12 | 0.0394 |
| 4 | Rap1 signaling pathway | AKT1, DRD2, EGF, HRAS, IGF1R, INS, INSR, ITGB3, PIK3CA, SRC | 0.3281 | 10 | 0.0246 |
| 5 | Estrogen signaling pathway | AKT1, CREB1, ESR1, ESR2, HRAS, PIK3CA, SRC | 0.3311 | 8 | 0.0263 |
| 6 | cGMP-PKG signaling pathway | ADORA1, AKT1, SLC25A4, CREB1, EDNRA, INS, INSR | 0.3208 | 7 | 0.0125 |
The docking energy results of the complex between key targets and the key compounds for TTNC in treatment with migraine.
| Protein name | Gene name | PDB ID | Ligand name | PubChem ID | Binding energy (kcal/mol) |
|---|---|---|---|---|---|
| 5-Hydroxytryptamine receptor 1A | HTR1A | 7E2Z | Decursin | 442126 | −8.65 |
| 5-Hydroxytryptamine receptor 2A | HTR2A | 6WGT | Hamaudol | 164722 | −7.94 |
| D(2) dopamine receptor | DRD2 | 6CM4 | Adenosine | 60961 | −6.32 |
| Nitric oxide synthase, brain | NOS1 | 3HSN | Adenosine | 60961 | −5.06 |
| Estrogen receptor | ESR1 | 5FQP | Epicatechin | 72276 | −7.70 |
| Estrogen receptor beta | ESR2 | 2YLY | Epigallocatechin | 72277 | −6.74 |
| Aromatase | CYP19A1 | 3S79 | Kaempferol | 5280863 | −6.88 |
| Androgen receptor | AR | 2PIW | Paeonol | 11092 | −4.51 |
Figure 5The molecular docking results of TTNC in treatment with migraine.
Figure 6The results of experimental verification. (a) Behavioral changes of the control, model, and TTN group. (b) The contents of NO and β-EP in blood serum of the control, model, and TTN group. (c) The HTR1A and DRD2 levels in brain tissue detected by ELISA of the control, model, and TTN group.