| Literature DB >> 35070136 |
Veronika V Golygina1,2, Oksana V Ermolaeva2.
Abstract
Quantitative and qualitative analysis of chromosomal polymorphism in 19 natural populations of Ch.agilis had been performed. Most studied populations showed a medium level of chromosomal polymorphism: on average 45±3.0% of specimens are heterozygotes with 0.52±0.01 heterozygotic inversion per larvae. Besides inversions, B-chromosomes were found in two populations. The total number of banding sequences found in banding sequence pool of Ch.agilis is 16. Three banding sequences - p'agiB3, p'agiD3, p'agiF3 - are described for the first time. Veronika V. Golygina, Oksana V. Ermolaeva.Entities:
Keywords: Banding sequence; Ch.plumosus group; inversion; karyological analysis; karyotype; polythene chromosome; sibling species
Year: 2021 PMID: 35070136 PMCID: PMC8709836 DOI: 10.3897/CompCytogen.v15.i4.76761
Source DB: PubMed Journal: Comp Cytogenet ISSN: 1993-0771 Impact factor: 1.800
Collection sites.
| Collection place | Abbreviation | Collection date | Geographic coordinates | Number of larvae |
|---|---|---|---|---|
|
| ||||
| Rybinsk Reservoir | YAR-RY | 13.05.1988 11.07.1988 01.08.1988 |
| 4 |
|
| ||||
| Berdsky Pond, the Shadrikha Rivulet, Berdsk | NSK-BE | 27.05.1985 18.06.1986 02.06.1987 |
| 45 |
| The Eltsovka River, Novosibirsk | NSK-EL | 14.05.2001 16.05.2001 |
| 4 |
| Kainka Lake, Kainskaya Zaimka settlement | NSK-KA | 20.09.1989 27.04.1991 |
| 34 |
| The Shadrikha River, mouth | NSK-SH | 07.05.2008 12.05.2011 11.05.2012 05.05.2014 04.05.2016 05.05.2017 |
| 259 |
| Bol’shaya Protoka Lake, Rechport, Novosibirsk | NSK-2R | 13.05.2005 |
| 14 |
| Pond on the Shipunikha River, Iskitim | NSK-SP | 07.05.2015 |
| 1 |
| Pond on the Koynikha River, Linevo settlement | NSK-LI | 18.05.2006 |
| 32 |
| Pond on the Chernodyrikha River, Ryabchinka village | NSK-CH | 16.05.2006 |
| 2 |
| Pond on the Sarbayan River, Uchastok-Balta village | NSK-SA | 16.05.2002 |
| 5 |
| Pond on the Ora River, Sokur settlement | NSK-OR | 17.05.2002 12.05.2006 |
| 52 |
| Pond on the Tars’ma River, Yurti settlement | NSK-YU | 14.05.2002 22.05.2004 |
| 151 |
| Pond on the Tars’ma River, Stepnogutovo settlement | NSK-ST | 12.05.2011 12.05.2016 |
| 54 |
|
| ||||
| Tanaevo Lake, Zhuravlevo settlement | KEM-TA | 14.05.2002 |
| 1 |
|
| ||||
| Gilovskoye Reservoir | ALT-GI | 15.05.2003 |
| 1 |
| Travinayoe Lake, Oskolkovo settlement | ALT-TR | 08.05.1994 |
| 3 |
|
| ||||
| The Amur River, Khabarovsk | KHA-AM | 21.06.1987 |
| 2 |
| Evoron Lake | KHA-EV | 17.07.2006 |
| 36 |
|
| ||||
| Solyonoe Lake, Yakutsk vicinity | YAK-SO | 05.09.1987 |
| 2 |
Figure 1.Karyotype of ; p’agiA1.1, p’agiB2.2 etc. – genotypic combinations of banding sequences; BR – Balbiani ring, N – nucleolus. Arrows indicate centromeric regions.
Figure 2.Mapping of main banding sequences in arms a–f of . Arrows indicate centromeric regions. KV – version of mapping in arm E according to Keyl (1962), GV – version of mapping in arm E according to Golygina and Kiknadze (2018).
Frequencies of genotypic combinations of banding sequences in populations of .
| Genotypic combination | Eastern Europe | Siberia | the Far East | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| YAR-RY† | NSK-BE | NSK-EL | NSK-KA | NSK-SH | NSK-2R | NSK-SP | NSK-LI | NSK-CH | NSK-SA | NSK-OR | NSK-YU | NSK-ST | KEM-TA | ALT-GI | ALT-TR | YAK-SO | KHA-EV | KHA-AM | ||
| 100‡§ | 4 | 45 | 4 | 34 | 259 | 14 | 1 | 32 | 2 | 5 | 52 | 151 | 54 | 1 | 1 | 3 | 2 | 36 | 2 | |
| p’agiA1.1 |
| 1 |
| 0.750 |
|
|
| 1 |
| 1 | 1 |
|
|
| 1 | 1 | 1 | 1 |
| 1 |
| p’agiA1.2 |
| 0 |
| 0.250 |
|
|
| 0 |
| 0 | 0 |
|
|
| 0 | 0 | 0 | 0 |
| 0 |
| p’agiB1.1 |
| 1 |
| 0 |
|
|
| 0 |
| 1 | 0 |
|
|
| 0 | 0 | 0 | 0.500 |
| 0.500 |
| p’agiB2.2 |
| 0 |
| 1 |
|
|
| 1 |
| 0 | 1 |
|
|
| 1 | 1 | 0.667 | 0 |
| 0.500 |
| p’agiB1.2 |
| 0 |
| 0 |
|
|
| 0 |
| 0 | 0 |
|
|
| 0 | 0 | 0.333 | 0.500 |
| 0 |
| p’agiB2.3 |
| 0 |
| 0 |
|
|
| 0 |
| 0 | 0 |
|
|
| 0 | 0 | 0 | 0 |
| 0 |
| h’agiC1.1 |
| 1 |
| 1 |
|
|
| 1 |
| 1 | 1 |
|
|
| 1 | 1 | 0.333 | 1 |
| 1 |
| h’agiC1.p’agiC2 |
| 0 |
| 0 |
|
|
| 0 |
| 0 | 0 |
|
|
| 0 | 0 | 0.667 | 0 |
| 0 |
| p’agiD1.1 |
| 1 |
| 1 |
|
|
| 1 |
| 1 | 1 |
|
|
| 1 | 1 | 1 | 1 |
| 1 |
| p’agiD1.2 |
| 0 |
| 0 |
|
|
| 0 |
| 0 | 0 |
|
|
| 0 | 0 | 0 | 0 |
| 0 |
| p’agiD1.3 |
| 0 |
| 0 |
|
|
| 0 |
| 0 | 0 |
|
|
| 0 | 0 | 0 | 0 |
| 0 |
| h’agiE1.1 |
| 1 |
| 1 |
|
|
| 1 |
| 1 | 1 |
|
|
| 1 | 1 | 1 | 1 |
| 1 |
| h’agiF1.p’agiE2 |
| 0 |
| 0 |
|
|
| 0 |
| 0 | 0 |
|
|
| 0 | 0 | 0 | 0 |
| 0 |
| p’agiF1.1 |
| 1 |
| 0.750 |
|
|
| 1 |
| 1 | 1 |
|
|
| 0 | 0 | 0 | 0 |
| 1 |
| p’agiF2.2 |
| 0 |
| 0 |
|
|
| 0 |
| 0 | 0 |
|
|
| 0 | 0 | 0 | 0 |
| 0 |
| p’agiF1.2 |
| 0 |
| 0.250 |
|
|
| 0 |
| 0 | 0 |
|
|
| 1 | 1 | 1 | 1 |
| 0 |
| p’agiF1.3 |
| 0 |
| 0 |
|
|
| 0 |
| 0 | 0 |
|
|
| 0 | 0 | 0 | 0 |
| 0 |
| p’agiG1.1 |
| 1 |
| 1 |
|
|
| 1 |
| 1 | 1 |
|
|
| 1 | 1 | 1 | 1 |
| 1 |
| B-chromosome |
| 0 |
| 0 |
|
|
| 0 |
| 0 | 0 |
|
|
| 0 | 0 | 0 | 0 |
| 0 |
| Number of banding sequences |
| 7 |
| 9 |
|
|
| 7 |
| 7 | 7 |
|
|
| 7 | 7 | 9 | 8 |
| 8 |
| Number of genotypic combinations of banding sequences |
| 7 |
| 9 |
|
|
| 7 |
| 7 | 7 |
|
|
| 7 | 7 | 9 | 8 |
| 8 |
| % of heterozygous larvae |
| 0 |
| 50.0 |
|
|
| 0 |
| 0 | 0 |
|
|
| 0 | 0 | 66.7 | 50.0 |
| 0 |
| Number of heterozygous inversions per larvae |
| 0 |
| 0.500 |
|
|
| 0 |
| 0 | 0 |
|
|
| 0 | 0 | 1.0 | 0.500 |
| 0 |
† – populations highlighted with bold were used for quantitative analysis of chromosomal polymorphism; ‡ – number of larvae studied; § – the data were published by Shobanov and Djomin (1988).
Frequencies of banding sequences in populations of .|
| Banding sequnce | Europe | Siberia | the Far East | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| YAR-RY | NSK-BE | NSK-KA | NSK-SH | NSK-2R | NSK-LI | NSK-OR | NSK-YU | NSK-ST | KHA-EV | |
| 100¶ | 45 | 34 | 259 | 14 | 32 | 52 | 151 | 54 | 36 | |
| p’agiA1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| p’agiA2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| p’agiB1 | 1 | 0.178 | 0.279 | 0.291 | 0.214 | 0.359 | 0.154 | 0.152 | 0.288 | 0 |
| p’agiB2 | 0 | 0.822 | 0.721 | 0.707 | 0.786 | 0.641 | 0.846 | 0.848 | 0.712 | 1 |
| p’agiB3 | 0 | 0 | 0 | 0.002 | 0 | 0 | 0 | 0 | 0 | 0 |
| h’agiC1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| p’agiC2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| p’agiD1 | 1 | 1 | 1 | 0.998 | 1 | 1 | 1 | 1 | 0.991 | 0.986 |
| p’agiD2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.014 |
| p’agiD3 | 0 | 0 | 0 | 0.002 | 0 | 0 | 0 | 0 | 0.009 | 0 |
| h’agiE1 | 1 | 1 | 1 | 0.996 | 1 | 1 | 1 | 1 | 1 | 1 |
| p’agiE2 | 0 | 0 | 0 | 0.004 | 0 | 0 | 0 | 0 | 0 | 0 |
| p’agiF1 | 1 | 0.900 | 0.912 | 0.911 | 0.929 | 0.797 | 0.837 | 0.851 | 0.889 | 1 |
| p’agiF2 | 0 | 0.100 | 0.088 | 0.087 | 0.071 | 0.203 | 0.163 | 0.149 | 0.111 | 0 |
| p’agiF3 | 0 | 0 | 0 | 0.002 | 0 | 0 | 0 | 0 | 0 | 0 |
| p’agiG1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| – only populations with enough larva for quantitative analysis (more than 10 specimens) are included into this table. ¶ – number of larvae studied.
Figure 3.Inversions in arms A (a) and B (b, c) found in populations of Arrows indicate centromeric regions. Brackets show regions of inversions.
Figure 4.Inversions in arms C (a) and D (b, c) found in populations of Designations as on Fig. 3.
Figure 5.Inversions in arms E (a) and F (b, c) found in populations of Designations as on Fig. 3.
Figure 6.Cytogenetic structure (frequency polygons) of studied populations of ; YAR-RY, NSK-BE etc. – collections sites (see Table 1), p’agiA1, p’agiB1 etc. – main banding sequences of the species, 0.2, 0.4 etc. – frequencies of main banding sequences.
Cytogenetic distances between populations of , calculated based on the Nei criteria (Nei 1972).
| YAR-RY | NSK-BE | NSK-KA | NSK-SH | NSK-2R | NSK-LI | NSK-OR | NSK-YU | NSK-ST | |
|---|---|---|---|---|---|---|---|---|---|
| NSK-BE | 0.106 | ||||||||
| NSK-KA | 0.081 | 0.002 | |||||||
| NSK-SH | 0.078 | 0.002 | 0.000 | ||||||
| NSK-2R | 0.096 | 0.000 | 0.001 | 0.001 | |||||
| NSK-LI | 0.116 | 0.001 | 0.003 | 0.004 | 0.002 | ||||
| NSK-OR | 0.069 | 0.007 | 0.003 | 0.003 | 0.006 | 0.007 | |||
| NSK-YU | 0.116 | 0.001 | 0.003 | 0.004 | 0.002 | 0.000 | 0.007 | ||
| NSK-ST | 0.080 | 0.002 | 0.000 | 0.000 | 0.001 | 0.003 | 0.002 | 0.003 | |
| KHA-EV | 0.155 | 0.006 | 0.012 | 0.013 | 0.007 | 0.007 | 0.025 | 0.006 | 0.013 |
Figure 7.Phylogenetic tree of studied populations of , calculated based on the neighbor-joining method.