Literature DB >> 35065915

Sequence coevolution and structure stabilization modulate olfactory receptor expression.

Soumadwip Ghosh1, Claire A de March2, Sergio Branciamore1, Sahar Kaleem2, Hiroaki Matsunami3, Nagarajan Vaidehi4.   

Abstract

Olfactory receptors (ORs) belong to class A G-protein coupled receptors (GPCRs) and are activated by a variety of odorants. To date, there is no three-dimensional structure of an OR available. One of the major bottlenecks in obtaining purified protein for structural studies of ORs is their poor expression in heterologous cells. To design mutants that enhance expression and thereby enable protein purification, we first identified computable physical properties that recapitulate OR and class A GPCR expression and further conducted an iterative computational prediction-experimental test cycle and generated human OR mutants that express as high as biogenic amine receptors for which structures have been solved. In the process of developing the computational method to recapitulate the expression of ORs in membranes, we identified properties, such as amino acid sequence coevolution, and the strength of the interactions between intracellular loop 1 (ICL1) and the helix 8 region of ORs, to enhance their heterologous expression. We identified mutations that are directly located in these regions as well as other mutations not located in these regions but allosterically strengthen the ICL1-helix 8 enhance expression. These mutants also showed functional responses to known odorants. This method to enhance heterologous expression of mammalian ORs will facilitate high-throughput "deorphanization" of ORs, and enable OR purification for biochemical and structural studies to understand odorant-OR interactions.
Copyright © 2022. Published by Elsevier Inc.

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Year:  2022        PMID: 35065915      PMCID: PMC8947990          DOI: 10.1016/j.bpj.2022.01.015

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  41 in total

1.  GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation.

Authors:  Berk Hess; Carsten Kutzner; David van der Spoel; Erik Lindahl
Journal:  J Chem Theory Comput       Date:  2008-03       Impact factor: 6.006

2.  CHARMM-GUI: a web-based graphical user interface for CHARMM.

Authors:  Sunhwan Jo; Taehoon Kim; Vidyashankara G Iyer; Wonpil Im
Journal:  J Comput Chem       Date:  2008-08       Impact factor: 3.376

3.  Prediction of Conformation Specific Thermostabilizing Mutations for Class A G Protein-Coupled Receptors.

Authors:  Suvamay Jana; Soumadwip Ghosh; Sanychen Muk; Benjamin Levy; Nagarajan Vaidehi
Journal:  J Chem Inf Model       Date:  2019-08-27       Impact factor: 4.956

4.  The hydrophobic amino acid residues in the membrane-proximal C tail of the G protein-coupled vasopressin V2 receptor are necessary for transport-competent receptor folding.

Authors:  Anja Thielen; Morad Oueslati; Ricardo Hermosilla; Gerd Krause; Alexander Oksche; Walter Rosenthal; Ralf Schülein
Journal:  FEBS Lett       Date:  2005-09-26       Impact factor: 4.124

5.  Functional expression of olfactory-adrenergic receptor chimeras and intracellular retention of heterologously expressed olfactory receptors.

Authors:  T S McClintock; T M Landers; A A Gimelbrant; L Z Fuller; B A Jackson; C K Jayawickreme; M R Lerner
Journal:  Brain Res Mol Brain Res       Date:  1997-09

6.  Structure of the agonist-bound neurotensin receptor.

Authors:  Jim F White; Nicholas Noinaj; Yoko Shibata; James Love; Brian Kloss; Feng Xu; Jelena Gvozdenovic-Jeremic; Priyanka Shah; Joseph Shiloach; Christopher G Tate; Reinhard Grisshammer
Journal:  Nature       Date:  2012-10-10       Impact factor: 49.962

Review 7.  Stabilization of G protein-coupled receptors by point mutations.

Authors:  Franziska M Heydenreich; Ziva Vuckovic; Milos Matkovic; Dmitry B Veprintsev
Journal:  Front Pharmacol       Date:  2015-04-20       Impact factor: 5.810

8.  In Vitro Mutational Analysis of the β2 Adrenergic Receptor, an In Vivo Surrogate Odorant Receptor.

Authors:  Sophie Jamet; Jaclyn Bubnell; Patrick Pfister; Delia Tomoiaga; Matthew E Rogers; Paul Feinstein
Journal:  PLoS One       Date:  2015-10-29       Impact factor: 3.240

9.  Structure and dynamics of a constitutively active neurotensin receptor.

Authors:  Brian E Krumm; Sangbae Lee; Supriyo Bhattacharya; Istvan Botos; Courtney F White; Haijuan Du; Nagarajan Vaidehi; Reinhard Grisshammer
Journal:  Sci Rep       Date:  2016-12-07       Impact factor: 4.379

Review 10.  How Can Mutations Thermostabilize G-Protein-Coupled Receptors?

Authors:  Nagarajan Vaidehi; Reinhard Grisshammer; Christopher G Tate
Journal:  Trends Pharmacol Sci       Date:  2015-11-05       Impact factor: 14.819

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