| Literature DB >> 35063962 |
Guosong Wu1, Adam G D'Souza2,3, Hude Quan2, Danielle A Southern2, Erik Youngson3, Tyler Williamson2, Cathy Eastwood2, Yuan Xu2,4.
Abstract
OBJECTIVE: To evaluate the validity of COVID-19 International Classification of Diseases, 10th Revision (ICD-10) codes and their combinations.Entities:
Keywords: COVID-19; ICD-10; positive predictive value; sensitivity; validation
Mesh:
Year: 2022 PMID: 35063962 PMCID: PMC8787827 DOI: 10.1136/bmjopen-2021-057838
Source DB: PubMed Journal: BMJ Open ISSN: 2044-6055 Impact factor: 2.692
Baseline patient characteristics
| Characteristic* | Cohort A | Cohort B | ||
| ED | Inpatient | ED | Inpatient | |
| Age in years median (IQR) | 47 (31–64) | 64 (46–79) | 43 (26–63) | 73 (58–84) |
| ≤18 | 1301 (7.24) | 173 (2.67) | 5034 (14.95) | 581 (3.10) |
| 19–40 | 5954 (33.12) | 1086 (16.77) | 10 420 (30.94) | 1596 (8.51) |
| 41–60 | 5429 (30.20) | 1622 (25.04) | 8600 (25.54) | 3059 (16.32) |
| 60–80 | 3610 (20.08) | 2174 (33.56) | 6637 (19.71) | 7291 (38.89) |
| >80 | 1685 (9.37) | 1422 (21.95) | 2984 (8.86) | 6219 (33.18) |
| Female | 9009 (50.11) | 2986 (46.11) | 17 411 (51.7) | 9110 (48.60) |
| Charlson Index, median (IQR) | 0 (0–2) | 2 (0–4) | 0 (0–2) | 4 (1–6) |
| Myocardial infarction | 1014 (5.64) | 759 (11.72) | 1697 (5.04) | 2757 (14.71) |
| Chronic heart failure | 1186 (6.60) | 1006 (15.53) | 2034 (6.04) | 4230 (22.56) |
| Peripheral vascular disease | 548 (3.05) | 437 (6.75) | 1007 (2.99) | 1831 (9.77) |
| Cerebrovascular disease | 1082 (6.02) | 815 (12.58) | 1998 (5.93) | 3711 (19.80) |
| Dementia | 828 (4.61) | 763 (11.78) | 1239 (3.68) | 2843 (15.17) |
| Chronic obstructive pulmonary disease | 3519 (19.57) | 1737 (26.82) | 6280 (18.65) | 5370 (28.65) |
| Rheumatoid arthritis | 334 (1.86) | 206 (3.18) | 564 (1.67) | 678 (3.62) |
| Peptic ulcer disease | 732 (4.07) | 417 (6.44) | 1235 (3.67) | 1489 (7.94) |
| Liver disease | 951 (5.29) | 644 (9.94) | 1719 (5.11) | 2462 (13.13) |
| Diabetes | 5587 (31.07) | 3829 (59.11) | 8227 (24.43) | 10 159 (54.19) |
| Paraplegia and hemiplegia | 315 (1.75) | 246 (3.80) | 521 (1.55) | 1102 (5.88) |
| Renal disease | 793 (4.41) | 675 (10.42) | 1299 (3.86) | 2673 (14.26) |
| Cancer | 1105 (6.15) | 789 (12.18) | 3588 (10.65) | 6931 (36.97) |
| Metastatic carcinoma | 280 (1.56) | 225 (3.47) | 1934 (5.69) | 4449 (23.73) |
| AIDS/HIV | 43 (0.24) | 31 (0.48) | 86 (0.26) | 61 (0.33) |
| Any comorbidity | 8278 (46.04) | 4644 (71.70) | 14 478 (42.99) | 15 988 (85.29) |
| Symptomatic at test | ||||
| Yes | 8031 (44.67) | 2343 (36.17) | 5124 (15.22) | 1977 (10.55) |
| No | 4288 (23.85) | 1434 (22.14) | 2207 (6.55) | 1135 (6.05) |
| Unknown | 1964 (10.92) | 1014 (15.66) | 1361 (4.04) | 872 (4.65) |
| Missing | 3696 (20.56) | 1686 (26.03) | 24 983 (74.19) | 14 762 (78.75) |
| Mechanical ventilation | NA | 618 (9.54) | NA | 1515 (8.08) |
| Days between positive lab test to admission or ED visit, median (IQR) | 0 (−1 to 7) | 1 (0, 7) | 1 (−1 to 6) | 1 (0, 6) |
| ICU admission | NA | 970 (14.98) | NA | 2448 (13.06) |
| Length of Stay (days), median (IQR) | NA | 6 (3–14) | NA | 8 (3–19) |
| Death at discharge | 34 (0.19) | 1029 (15.89) | 161 (0.48) | 7276 (38.81) |
| Location of admission | ||||
| Suburban/rural | 5453 (30.33) | 1124 (17.35) | 11 226 (33.34) | 3822 (20.39) |
| Large urban | 6285 (34.96) | 3186 (49.19) | 10 580 (31.12) | 7244 (38.64) |
| Others | 6241 (34.71) | 2167 (33.46) | 11 849 (35.18) | 7680 (40.97) |
*Data presented as number (percentage) of patients unless otherwise indicated.
ED, emergency department; ICU, intensive care unit; NA, not applicable.
Figure 1COVID-19-related ICD-10 code counts among inpatients and ED visits (left line chart) and new cases reported (right bar chart) between 1 March 2020 and 28 February 2021. ED, emergency department; ICD-10, International Classification of Diseases, 10th Revision.
Performance characteristics of ICD-10 among inpatients and ED visits
| ICD-10 codes | ED visits | Inpatients | Entire cohort | |||
| Sensitivity | PPV | Sensitivity | PPV | Sensitivity | PPV | |
| U07.1 | 81.27% (80.53% to 81.99%) | 93.34% (92.83% to 93.83%) | 94.19% (93.49% to 94.82%) | 94.51% (93.78% to 95.17%) | 82.48% (81.79% to 83.15%) | 93.09% (92.59% to 93.56%) |
| U07.1 and U07.3 | 81.31% (80.57% to 82.02%) | 93.24% (92.72% to 93.73%) | 94.42% (93.74% to 95.04%) | 94.19% (93.43% to 94.86%) | 82.54% (81.85% to 83.21%) | 92.91% (92.40% to 93.39%) |
| U07.1, U07.3, O98.5, Z03.8, Z11.5, Z51.5, Z71.1 | 83.30% (82.59% to 83.99%) | 29.22% (28.72% to 29.72%) | 95.83% (95.22% to 96.36%) | 22.91% (22.29% to 23.55%) | 84.42% (83.76% to 85.06%) | 23.09% (22.69% to 23.49%) |
ED, emergency department; ICD-10, International Classification of Diseases, 10th Revision; PPV, positive predictive value.
Performance of ICD-10 (U07.1) among patient subgroups tested for confirmed COVID-19
| Characteristic | ED visits | Inpatients | Entire cohort | |||
| Sensitivity (95% CI) | PPV | Sensitivity (95% CI) | PPV | Sensitivity (95% CI) | PPV | |
| Age, years | ||||||
| ≤18 | 76.55% (73.26% to 79.55%) | 93.55% (91.20% to 95.30%) | 82.18% (73.58% to 88.42%) | 86.36% (77.66% to 92.02%) | 77.07% (73.87% to 79.99%) | 92.63% (90.25% to 94.46%) |
| 19–40 | 79.16% (77.72% to 80.53%) | 90.80% (89.67% to 91.82%) | 89.49% (86.93% to 91.60%) | 89.11% (86.47% to 91.29%) | 79.07% (77.66% to 80.42%) | 90.28% (89.17% to 91.29%) |
| 41–60 | 82.87% (81.59% to 84.08%) | 93.95% (93.06% to 94.74%) | 95.18% (93.82% to 96.25%) | 94.74% (93.28% to 95.90%) | 83.92% (82.69% to 85.07%) | 93.92% (93.05% to 94.69%) |
| 61–80 | 82.27% (80.73% to 83.72%) | 94.92% (93.92% to 95.76%) | 95.17% (94.04% to 96.09%) | 96.09% (94.97% to 96.97%) | 83.89% (82.49% to 85.21%) | 94.57% (93.59% to 95.40%) |
| >80 | 83.06% (80.67% to 85.21%) | 95.21% (93.61% to 96.43%) | 95.56% (94.18% to 96.63%) | 96.26% (94.74% to 97.35%) | 86.94% (85.04% to 88.63%) | 95.20% (93.73% to 96.34%) |
| Sex | ||||||
| Male | 81.22% (80.18% to 82.23%) | 93.14% (92.39% to 93.81%) | 94.77% (93.85% to 95.55%) | 94.56% (93.57% to 95.41%) | 82.76% (81.78% to 83.69% | 92.90% (92.18% to 93.56% |
| Female | 81.31% (80.25% to 82.33%) | 93.56% (92.82% to 94.23%) | 93.48% (92.34% to 94.45%) | 94.40% (93.23% to 95.37%) | 82.19% (81.19% to 83.15% | 93.27% (92.55% to 93.93% |
| Ventilation | ||||||
| Yes | NA | NA | 96.76% (95.00% to 97.92%) | 94.40% (92.17% to 96.03%) | 96.76% (95.00% to 97.92% | 94.40% (92.17% to 96.03% |
| No | NA | NA | 93.81% (93.05% to 94.50%) | 94.33% (93.53% to 95.04%) | 82.29% (81.59% to 82.97% | 93.13% (92.63% to 93.61% |
| ICU admission | ||||||
| Yes | NA | NA | 97.03% (95.71% to 97.95%) | 94.46% (92.71% to 95.81%) | 97.03% (95.71% to 97.95% | 94.46% (92.71% to 95.81% |
| No | NA | NA | 93.48% (92.67% to 94.20%) | 94.30% (93.47% to 95.03%) | 93.48% (92.67% to 94.20% | 94.30% (93.47% to 95.03% |
| Patient discharge status | ||||||
| Alive | 81.30% (80.56% to 82.02%) | 93.37% (92.85% to 93.85%) | 93.67% (92.86% to 94.40%) | 94.15% (93.31% to 94.89%) | 82.09% (81.38% to 82.77%) | 93.07% (92.56% to 93.55%) |
| Dead | 69.23% (50.01% to 83.50%) | 85.00% (63.96% to 94.76%) | 96.19% (94.79% to 97.22%) | 95.71% (94.04% to 96.93%) | 95.48% (94.01% to 96.61%) | 95.44% (93.76% to 96.69%) |
| Academic hospital | ||||||
| Yes | 80.06% (78.07% to 81.91%) | 93.49% (92.07% to 94.67%) | 95.56% (94.08% to 96.69%) | 91.99% (90.00% to 93.61%) | 83.28% (81.52% to 84.90%) | 92.03% (90.63% to 93.23%) |
| No | 81.30% (80.56% to 82.02%) | 93.14% (92.57% to 93.66%) | 93.75% (92.95% to 94.47%) | 94.73% (93.92% to 95.44%) | 81.69% (80.93% to 82.42%) | 93.02% (92.47% to 93.53%) |
| Season change | ||||||
| March–May | 84.60% (82.01% to 86.88%) | 92.54% (90.40% to 94.24%) | 95.83% (93.00% to 97.55%) | 92.42% (88.59% to 95.04%) | 86.22% (83.82% to 88.32%) | 92.38% (90.31% to 94.03%) |
| June–August | 75.25% (72.50% to 77.80%) | 96.09% (94.53% to 97.22%) | 94.28% (91.41% to 96.23%) | 96.39% (93.66% to 97.97%) | 76.73% (74.14% to 79.14%) | 95.75% (94.23% to 96.89%) |
| September–November | 78.62% (77.16% to 80.00%) | 95.33% (94.46% to 96.06%) | 92.50% (90.99% to 93.78%) | 95.55% (94.12% to 96.65%) | 80.20% (78.87% to 81.47%) | 94.82% (93.95% to 95.57%) |
| December–February | 83.15% (82.18% to 84.07%) | 91.66% (90.90% to 92.36%) | 94.44% (93.52% to 95.23%) | 93.97% (92.98% to 94.82%) | 84.05% (83.13% to 84.92%) | 91.54% (90.81% to 92.22%) |
| Symptomatic at test | ||||||
| Yes | 80.10% (78.93% to 81.22%) | 100.00% (99.90% to 100.00%) | 95.40% (94.26% to 96.32%) | 100.00% (99.74% to 100.00%) | 80.95% (79.82% to 82.03%) | 100.00% (99.90% to 100.00%) |
| No | 80.12% (78.03% to 82.06%) | 100.00% (99.68% to 100.00%) | 92.52 (90.39% to 94.21%) | 100.00 (99.36% to 100.00%) | 81.57% (79.64% to 83.36%) | 100.00% (99.97% to 100.00%) |
| Unknown | 75.02% (72.81% to 77.10%) | 100.00% (99.68% to 100.00%) | 91.68% (89.68% to 93.32%) | 100.00% (99.40% to 100.00%) | 77.80% (75.83% to 79.65%) | 100.00% (99.72% to 100.00%) |
| Missing | 86.23% (85.01% to 87.37%) | 80.30% (78.95% to 81.58%) | 94.52% (93.28% to 95.54%) | 83.65% (81.68% to 85.44%) | 86.97% (85.84% to 88.03%) | 79.72% (78.42% to 80.96%) |
ED, emergency department; ICD-10, International Classification of Diseases, 10th Revision; ICU, intensive care unit; PPV, positive predictive value.