Literature DB >> 35059831

Konateibacter massiliensis gen. nov. sp. nov. and Paenibacillus faecalis sp. nov., Two New Species Isolated from the Stool Samples of Infants Suffering from Marasmus.

Marièma Sarr1,2,3, Mamadou L Tall1,2, Mariem Ben Khedher1,2, Thi-Phuong-Thao Pham1,2, Babacar Mbaye1,2, Aminata Camara1,2, Nicholas Armstrong1,2, Céline Chartier1,2, Amael Fadlane1,2, Cheikh Sokhna2,4,3, Didier Raoult1,2, Maryam Tidjani Alou1,2, Matthieu Million5,6.   

Abstract

Two bacterial strains were isolated and identified using microbial culturomics and characterised according to the taxono-genomics strategy. The strictly anaerobic strain, Marseille-P3773T, forms smooth and translucent colonies consisting of Gram-stain negative, non-motile and non-spore-forming rod-shaped cells. Strain Marseille-P3787T consists of Gram-stain positive, motile and spore-forming cells resulting in grey and translucent colonies. The phylogenetic analysis of the 16S rRNA gene of strains Marseille-P3773T and Marseille-P3787T revealed a 96.9% similarity level with Lachnotalea glycerini strain DLD10 and 97% identity with Paenibacillus uliginis strain N3/975, respectively. The genome of strain Marseille-P3773 is 4,260,534 bp long with a 40.3 mol% G + C content and includes 3879 predicted genes of which 3769 are protein-coding genes, 76 RNAs and 34 are pseudo-genes. Strain Marseille-P3787 had a genome size of 4,833,032 bp with a 47.9 mol% G + C and has 4481 predicted genes of which 4265 are protein-coding genes, 101 RNAs and 115 are pseudo-genes. According to the data collected on these strains and, more specifically to the genomic comparison, we suggest the creation of a new genus and species, Konateibacter massiliensis gen. nov., sp. nov. with strain Marseille-P3773T (=CSURP3773 and CCUG71331) as its type strain within the Lachnospiraceae family, as well as a new species, Paenibacillus faecalis sp. nov. with strain Marseille-P3787T (=CSURP3787 and CCUG71650) as its type strain within the Paenibacillus genus.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

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Year:  2022        PMID: 35059831     DOI: 10.1007/s00284-021-02757-6

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  28 in total

Review 1.  From culturomics to taxonomogenomics: A need to change the taxonomy of prokaryotes in clinical microbiology.

Authors:  Pierre-Edouard Fournier; Jean-Christophe Lagier; Gregory Dubourg; Didier Raoult
Journal:  Anaerobe       Date:  2015-10-27       Impact factor: 3.331

2.  The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota.

Authors:  Jean-Christophe Lagier; Perrine Hugon; Saber Khelaifia; Pierre-Edouard Fournier; Bernard La Scola; Didier Raoult
Journal:  Clin Microbiol Rev       Date:  2015-01       Impact factor: 26.132

Review 3.  Severe childhood malnutrition.

Authors:  Zulfiqar A Bhutta; James A Berkley; Robert H J Bandsma; Marko Kerac; Indi Trehan; André Briend
Journal:  Nat Rev Dis Primers       Date:  2017-09-21       Impact factor: 52.329

4.  MALDI-TOF Mass Spectrometry: A Powerful Tool for Clinical Microbiology at Hôpital Principal de Dakar, Senegal (West Africa).

Authors:  Cheikh I Lo; Bécaye Fall; Bissoume Sambe-Ba; Silman Diawara; Mamadou W Gueye; Oleg Mediannikov; Cheikh Sokhna; Ngor Faye; Yaya Diemé; Boubacar Wade; Didier Raoult; Florence Fenollar
Journal:  PLoS One       Date:  2015-12-30       Impact factor: 3.240

Review 5.  Current knowledge and perspectives of Paenibacillus: a review.

Authors:  Elliot Nicholas Grady; Jacqueline MacDonald; Linda Liu; Alex Richman; Ze-Chun Yuan
Journal:  Microb Cell Fact       Date:  2016-12-01       Impact factor: 5.328

6.  Paenibacillus spp. isolated from human and environmental samples in Spain: detection of 11 new species.

Authors:  J A Sáez-Nieto; M J Medina-Pascual; G Carrasco; N Garrido; M A Fernandez-Torres; P Villalón; S Valdezate
Journal:  New Microbes New Infect       Date:  2017-05-24

7.  Gut Bacteria Missing in Severe Acute Malnutrition, Can We Identify Potential Probiotics by Culturomics?

Authors:  Maryam Tidjani Alou; Matthieu Million; Sory I Traore; Donia Mouelhi; Saber Khelaifia; Dipankar Bachar; Aurelia Caputo; Jeremy Delerce; Souleymane Brah; Daouda Alhousseini; Cheikh Sokhna; Catherine Robert; Bouli A Diallo; Aldiouma Diallo; Philippe Parola; Michael Golden; Jean-Christophe Lagier; Didier Raoult
Journal:  Front Microbiol       Date:  2017-05-23       Impact factor: 5.640

8.  List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ.

Authors:  Aidan C Parte; Joaquim Sardà Carbasse; Jan P Meier-Kolthoff; Lorenz C Reimer; Markus Göker
Journal:  Int J Syst Evol Microbiol       Date:  2020-07-23       Impact factor: 2.747

9.  Infant Early Gut Colonization by Lachnospiraceae: High Frequency of Ruminococcus gnavus.

Authors:  Valeria Sagheddu; Vania Patrone; Francesco Miragoli; Edoardo Puglisi; Lorenzo Morelli
Journal:  Front Pediatr       Date:  2016-06-02       Impact factor: 3.418

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