Literature DB >> 35058692

Dynamics of Antimicrobial Peptide Encapsulation in Carbon Nanotubes: The Role of Hydroxylation.

Maryam Zarghami Dehaghani1, Farrokh Yousefi2, Farzad Seidi1, S Mohammad Sajadi3,4, Navid Rabiee5, Sajjad Habibzadeh6, Amin Esmaeili7, Amin Hamed Mashhadzadeh8, Christos Spitas8, Ebrahim Mostafavi9,10, Mohammad Reza Saeb11.   

Abstract

INTRODUCTION: Carbon nanotubes (CNTs) have been widely employed as biomolecule carriers, but there is a need for further functionalization to broaden their therapeutic application in aqueous environments. A few reports have unraveled biomolecule-CNT interactions as a measure of response of the nanocarrier to drug-encapsulation dynamics.
METHODS: Herein, the dynamics of encapsulation of the antimicrobial peptide HA-FD-13 (accession code 2L24) into CNTs and hydroxylated CNTs (HCNTs) is discussed.
RESULTS: The van der Waals (vdW) interaction energy of CNT-peptide and HCNT-peptide complexes decreased, reaching -110.6 and -176.8 kcal.Mol-1, respectively, once encapsulation of the peptide inside the CNTs had been completed within 15 ns. The free energy of the two systems decreased to -43.91 and -69.2 kcal.Mol-1 in the same order. DISCUSSION: The peptide was encased in the HCNTs comparatively more rapidly, due to the presence of both electrostatic and vdW interactions between the peptide and HCNTs. However, the peptide remained encapsulated throughout the vdW interaction in both systems. The negative values of the free energy of the two systems showed that the encapsulation process had occurred spontaneously. Of note, the lower free energy in the HCNT system suggested more stable peptide encapsulation.
© 2022 Zarghami Dehaghani et al.

Entities:  

Keywords:  antimicrobial peptide; carbon nanotubes; drug delivery; encapsulation; hydroxylation; molecular dynamic simulation

Mesh:

Substances:

Year:  2022        PMID: 35058692      PMCID: PMC8765279          DOI: 10.2147/IJN.S335380

Source DB:  PubMed          Journal:  Int J Nanomedicine        ISSN: 1176-9114


  34 in total

1.  Calculating potentials of mean force from steered molecular dynamics simulations.

Authors:  Sanghyun Park; Klaus Schulten
Journal:  J Chem Phys       Date:  2004-04-01       Impact factor: 3.488

2.  Convergent evolution-guided design of antimicrobial peptides derived from influenza A virus hemagglutinin.

Authors:  Shunyi Zhu; André Aumelas; Bin Gao
Journal:  J Med Chem       Date:  2011-01-11       Impact factor: 7.446

3.  VMD: visual molecular dynamics.

Authors:  W Humphrey; A Dalke; K Schulten
Journal:  J Mol Graph       Date:  1996-02

4.  The functionalization of carbon nanotubes to enhance the efficacy of the anticancer drug paclitaxel: a molecular dynamics simulation study.

Authors:  Hassan Hashemzadeh; Heidar Raissi
Journal:  J Mol Model       Date:  2017-07-12       Impact factor: 1.810

5.  Reciprocal effects of the chirality and the surface functionalization on the drug delivery permissibility of carbon nanotubes.

Authors:  Amir Alipour Skandani; Marwan Al-Haik
Journal:  Soft Matter       Date:  2013-12-28       Impact factor: 3.679

Review 6.  Functionalized carbon nanotubes in drug design and discovery.

Authors:  Maurizio Prato; Kostas Kostarelos; Alberto Bianco
Journal:  Acc Chem Res       Date:  2007-09-15       Impact factor: 22.384

Review 7.  Poloxamer: A versatile tri-block copolymer for biomedical applications.

Authors:  Payam Zarrintaj; Joshua D Ramsey; Ali Samadi; Zhaleh Atoufi; Mohsen Khodadadi Yazdi; Mohammad Reza Ganjali; Leila Mohammadi Amirabad; Ehsan Zangene; Mehdi Farokhi; Krzysztof Formela; Mohammad Reza Saeb; Masoud Mozafari; Sabu Thomas
Journal:  Acta Biomater       Date:  2020-05-15       Impact factor: 8.947

Review 8.  Carbon Nanotube Assembly and Integration for Applications.

Authors:  Anusha Venkataraman; Eberechukwu Victoria Amadi; Yingduo Chen; Chris Papadopoulos
Journal:  Nanoscale Res Lett       Date:  2019-07-01       Impact factor: 4.703

9.  Boron Nitride Nanotube as an Antimicrobial Peptide Carrier: A Theoretical Insight.

Authors:  Maryam Zarghami Dehaghani; Babak Bagheri; Farrokh Yousefi; Abbasali Nasiriasayesh; Amin Hamed Mashhadzadeh; Payam Zarrintaj; Navid Rabiee; Mojtaba Bagherzadeh; Vanessa Fierro; Alain Celzard; Mohammad Reza Saeb; Ebrahim Mostafavi
Journal:  Int J Nanomedicine       Date:  2021-03-04
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