| Literature DB >> 35055645 |
Youngbin Lym1, Hyobin Lym2, Keekwang Kim3, Ki-Jung Kim4.
Abstract
This study aims to provide an improved understanding of the local-level spatiotemporal evolution of COVID-19 spread across capital regions of South Korea during the second and third waves of the pandemic (August 2020~June 2021). To explain transmission, we rely upon the local safety level indices along with latent influences from the spatial alignment of municipalities and their serial (temporal) correlation. Utilizing a flexible hierarchical Bayesian model as an analytic operational framework, we exploit the modified BYM (BYM2) model with the Penalized Complexity (PC) priors to account for latent effects (unobserved heterogeneity). The outcome reveals that a municipality with higher population density is likely to have an elevated infection risk, whereas one with good preparedness for infectious disease tends to have a reduction in risk. Furthermore, we identify that including spatial and temporal correlations into the modeling framework significantly improves the performance and explanatory power, justifying our adoption of latent effects. Based on these findings, we present the dynamic evolution of COVID-19 across the Seoul Capital Area (SCA), which helps us verify unique patterns of disease spread as well as regions of elevated risk for further policy intervention and for supporting informed decision making for responding to infectious diseases.Entities:
Keywords: COVID-19; Seoul capital area; Spatiotemporal Bayesian; infection risks; local safety level index; unobserved heterogeneity
Mesh:
Year: 2022 PMID: 35055645 PMCID: PMC8776165 DOI: 10.3390/ijerph19020824
Source DB: PubMed Journal: Int J Environ Res Public Health ISSN: 1660-4601 Impact factor: 3.390
Figure 1Daily confirmed cases of COVID-19.
Figure 2(a) Map of South Korea; (b) Population density of the Seoul capital area.
Figure 3Distribution of COVID-19 confirmed cases (per 100,000 people). Note: the blue dotted vertical lines indicate the average number of confirmed cases for each province.
Data in detail.
| Data attribute | Description | Temporal Dimension | Sources |
|---|---|---|---|
| COVID-19 cases | Number of confirmed cases | Daily (1 August 2020~30 June 2021) | Each municipality |
| Population | Population count | Monthly (August 2020~June 2021) | KOSIS 1 |
| Population density | Population per km2 | Monthly (August 2020~June 2021) | KOSIS 1 |
| Age 10–19 | Percent of population aged 10–19 | Census 2020 | KOSIS 1 |
| Age 20–29 | Percent of population aged 20–29 | Census 2020 | KOSIS 1 |
| Local safety level index Living safety Infectious diseases | Index value (Levels 1–5) | 2019 | MOIS 2 |
| Spatial data | Geographical boundaries | Census boundary 2020 | SGIS 3 |
1 Korean Statistical Information Service (https://kosis.kr/eng/ accessed on 2 November 2021) [25]. 2 Ministry of the Interior and Safety (https://www.mois.go.kr/frt/sub/a06/b10/safetyIndex/screen.do accessed on 2 November 2021) [26]. 3 Statistical Geographic Information Service (https://sgis.kostat.go.kr/view/index accessed on 2 November 2021) [27].
Regression results.
| Dependent Variable: The Natural Log of Monthly Aggregates of COVID-19 per 100,000 | ||||||
|---|---|---|---|---|---|---|
| Model 1 3 | Model 2 3 | Model 3 3 | ||||
| Mean (S.D.) | 90% C.I. | Mean (S.D.) | 90% C.I. | Mean (S.D.) | 90% C.I. | |
|
| ||||||
| Intercept | 3.083 (0.118) | (2.889, 3.277) | 3.106 (0.079) | (2.975, 3.236) | 2.984 (0.169) | (2.702, 3.259) |
| Age cohort 10–19 | 0.076 (0.046) | (0.001, 0.151) | 0.076 (0.031) | (0.025, 0.126) | 0.100 (0.062) | (−0.003, 0.202) |
| Age cohort 20–29 | 0.057 (0.047) | (−0.021, 0.135) | 0.067 (0.032) | (0.015, 0.119) | 0.055 (0.063) | (−0.049, 0.157) |
| Population density Q2 1 | 0.427 (0.118) | (0.233, 0.621) | 0.354 (0.079) | (0.224, 0.485) | 0.476 (0.148) | (0.234, 0.723) |
| Population density Q3 | 0.312 (0.117) | (0.120, 0.504) | 0.285 (0.078) | (0.156, 0.414) | 0.524 (0.164) | (0.260, 0.799) |
| Population density Q4 | 0.400 (0.136) | (0.176, 0.624) | 0.356 (0.091) | (0.206, 0.506) | 0.510 (0.202) | (0.182, 0.845) |
| Living safety Normal 2 | 0.314 (0.119) | (0.118, 0.510) | 0.317 (0.080) | (0.186, 0.448) | 0.207 (0.168) | (−0.068, 0.484) |
| Living safety Good | 0.269 (0.115) | (0.080, 0.458) | 0.285 (0.077) | (0.159, 0.412) | 0.098 (0.170) | (−0.182, 0.377) |
| Infectious disease Normal 2 | −0.267 (0.104) | (−0.438, −0.096) | −0.265 (0.070) | (−0.380, −0.151) | −0.201 (0.143) | (−0.435, 0.034) |
| Infectious disease Good | −0.730 (0.112) | (−0.915, −0.544) | −0.723 (0.075) | (−0.847, −0.599) | −0.489 (0.167) | (−0.764, −0.213) |
|
| ||||||
| | 1.07 (0.052) | (0.986, 1.16) | 2.38 (0.117) | (2.19, 2.57) | 3.515 (0.181) | (3.225, 3.821) |
| | 1.89 (0.7385) | (0.91, 3.26) | 1.862 (0.722) | (0.907, 3.207) | ||
| | 6.818 (1.547) | (4.513, 9.565) | ||||
| | 0.673 (0.216) | (0.269, 0.958) | ||||
|
| ||||||
| DIC | 2360.61 | 1693.89 | 1418.29 | |||
| WAIC | 2360.87 | 1696.58 | 1423.78 | |||
| Marginal log-Likelihood | −1238.04 | −930.13 | −775.52 | |||
1 The first quartile of population density is used as the baseline. 2 For the two local safety level indices, we regard Bad as the reference category. 3 For comparison purposes, we provide Model 1 (No structured latent effects), Model 2 (with temporally structured effect), and Model 3 (having both spatial and temporal effects as suggested in equation (5)).
Figure 4Marginal posterior distribution of covariates (Fixed effects).
Figure 5Marginal posterior distribution of hyperparameters.
Figure 6Spatiotemporal diffusion risks of COVID-19 during the second and third waves of the pandemic.
Figure 7Exceedance probabilities of the dynamics of COVID-19 transmission risks.