Literature DB >> 35040706

Vaccinating Children against COVID-19: Commentary and Mathematical Modeling.

Michael T Hawkes1,2,3,4,5, Michael F Good6,7.   

Abstract

With the recent licensure of mRNA vaccines against COVID-19 in the 5- to 11-year-old age group, the public health impact of a childhood immunization campaign is of interest. Using a mathematical epidemiological model, we project that childhood vaccination carries minimal risk and yields modest public health benefits. These include large relative reductions in child morbidity and mortality, although the absolute reduction is small because these events are rare. Furthermore, the model predicts "altruistic" absolute reductions in adult cases, hospitalizations, and mortality. However, vaccinating children to benefit adults should be considered from an ethical as well as a public health perspective. From a global health perspective, an additional ethical consideration is the justice of giving priority to children in high-income settings at low risk of severe disease while vaccines have not been made available to vulnerable adults in low-income settings. IMPORTANCE Countries have recently begun implementation of childhood vaccination against SARS-CoV-2 with the Pfizer/BioNTech mRNA vaccine in children 5 to 11 years of age. Because SARS-CoV-2 disease severity is remarkably age dependent, vaccinating children may have modest public health benefits, relative to the unequivocal benefit of vaccinating vulnerable older adults. Furthermore, vaccinating children to "altruistically" increase herd immunity should be considered from an ethical as well as a public health perspective. An additional question is related to global social justice: should priority be given to vaccinating children in high-income settings while older adult populations in low-resource settings have limited access to vaccine? To address the risks and benefits of childhood vaccination, we provide a balanced commentary, supported by a mathematical epidemiological model, using Australia and Alberta, Canada, as case studies. We give highlights of the modeling findings in the commentary and include details in the supplemental materials for interested readers.

Entities:  

Keywords:  SARS-CoV-2; child; epidemiology; mRNA vaccine

Year:  2022        PMID: 35040706      PMCID: PMC8764932          DOI: 10.1128/mbio.03789-21

Source DB:  PubMed          Journal:  mBio            Impact factor:   7.867


Recently, Pfizer and BioNTech provided evidence that their mRNA vaccine against SARS-CoV-2 is safe and immunogenic in children 5 to 11 years of age (https://www.businesswire.com/news/home/20210920005452/en/Pfizer-and-BioNTech-Announce-Positive-Topline-Results-From-Pivotal-Trial-of-COVID-19-Vaccine-in-Children-5-to-11-Years). As countries prepare to incorporate school-age children into their vaccination schedules, the public health risks and benefits, as well as ethical considerations, should be carefully weighed. One of the most distinguishing features of the SARS-CoV-2 pandemic is the dramatic correlation between age and disease severity. Early in the pandemic, a study in Switzerland from February to June 2020 demonstrated that the infection fatality rate for those over 65 years was 5.6 per 100 (1). This compared with a rate of 0.0016 per 100 in those aged 5 to 9 years and only 0.00032 per 100 for those aged 10 to 19 years (1). Data from the United States show that over 19 months, there were 349 deaths in those aged 0 to 17 years from a total of 606,389 deaths (2). Based on these figures, the chances of a child (<18 years old) dying from COVID-19 was ∼2,500 times less than that of an older American (>65 years old). Clearly, early on in the pandemic, although children were dying of COVID-19, it was at a very low rate. On the other hand, the emergence of the more infectious SARS-CoV-2 delta variant has led to increased cases in children, and there is increased recognition of pediatric morbidity associated with the multisystem inflammatory syndrome in children (MIS-C). Nonetheless, based on these figures, the benefits of vaccination are far greater for the elderly than for children, but there is a dynamic interplay of benefits and risks that needs to be considered. Vaccines against SARS-CoV-2 are highly effective in clinical trials and real-world settings (3). Pfizer and BioNTech recently announced that their mRNA vaccine is safe and generates robust neutralizing antibody levels in children 5 to 11 years of age (https://www.businesswire.com/news/home/20210920005452/en/Pfizer-and-BioNTech-Announce-Positive-Topline-Results-From-Pivotal-Trial-of-COVID-19-Vaccine-in-Children-5-to-11-Years). The public health benefits of vaccination are 2-fold, to protect the health of vaccinees and to contribute to herd immunity. Herd immunity occurs when the percentage of the population who are unable to transmit the virus as a result of immunity is sufficient to extinguish the epidemic. ℛ0 is the basic reproduction number for a virus in a nonimmune population. Immunity in the population occurs as a result of vaccination and natural immunity (as a result of infection). Using the number of “cases” as a proxy for the number of infections and, hence, the number with natural immunity, in the United States and the United Kingdom, approximately 10% of the population has natural immunity, whereas in Australia, 0.16% have natural immunity. However, these numbers are underestimates, as many people who have been infected remain asymptomatic and do not become cases (4). If vaccinated individuals cannot transmit the virus, then the fraction of the population that needs to be vaccinated to end the epidemic is approximately 1 − 1/ℛ0. The ℛ0 for the dominant delta strain of SARS-CoV-2 has been reported to be between 5 and 8 (5). This means that between 80% and 87.5% of the entire population needs to be immune and nontransmitting. Even if ∼10% of the population were to develop immunity as a result of natural infection, then still between 70 and 80% of the population will need to be vaccinated and nontransmitting. There will be a need to vaccinate children of all ages, as well as adults, to reach 70 to 80%. Furthermore, recent reports show that the risk of household transmission is reduced by only ∼50% among vaccinated people who develop breakthrough SARS-CoV-2 infection (6). While herd immunity is unlikely to be attainable through vaccination, higher levels of immunity will reduce the spread. Combined with social distancing and wearing of masks, we will be able to control focal epidemics (7). To hasten and enhance the development of herd immunity, vaccination of children 5 to 11 years of age may be contemplated (∼10% of the entire population). However, vaccinating young children will have limited direct benefit to them as outlined above, but this population, by being immune, will protect the older and more vulnerable and, in particular, the nonvaccinated. We hypothesize that childhood vaccination against SARS-CoV-2 will be associated with reductions in disease burden in children (directly, through disease attenuation among vaccinees) and in adults (indirectly, through herd immunity). We use mathematical modeling to support this hypothesis and provide quantitative estimates of the public health effects of childhood vaccination over 1 year in two jurisdictions, Australia and Alberta (Canada).

RESULTS

We modeled the course of SARS-CoV-2 delta variant (ℛ0 = 5.08) in Australia (Table 1) and Alberta (Table 2) for 1 year, with and without childhood vaccination. The expected epidemic curve was observed, with infections eventually extinguishing to zero (Fig. 1).
TABLE 1

Simulation for Australia (ℛ0 = 5.08, 80% of adults vaccinated), including projected differences in cases, hospitalizations, deaths due to COVID-19, multisystem inflammatory syndrome in children (MIS-C), and vaccine adverse events associated with childhood vaccination

ParameterNo. of patients with childhood vaccinationNo. of patients with childhood vaccination (80% coverage)No. of patients with absolute reductionRelative reduction (%)
Cases of COVID-19 (×1,000)
 All age groups12,200 (3,790 to 18,200)10,500 (1,610 to 17,400)1,760 (845 to 2,560)14 (4.6 to 59)
 5–11 yrs old729 (262 to 1,030)233 (25.9 to 564)496 (241 to 563)68 (45 to 91)
 Vaccinated adults7,800 (1,440 to 13,000)6,860 (635 to 12,700)932 (258 to 1,440)12 (2 to 58)
 Unvaccinated adults3,530 (1,820 to 3,950)3,220 (850 to 3,850)305 (104 to 993)8.6 (2.6 to 54)
Hospitalizationsa
 All age groups532,000 (152,000 to 857,000)472,000 (68,800 to 834,000)60,600 (23,200 to 97,700)11 (2.7 to 56)
 5–11 yrs old78.4 (28.2 to 110)25.1 (2.78 to 60.6)53.3 (25.9 to 60.5)68 (45 to 91)
 Vaccinated adults360,000 (62,700 to 650,000)314000 (27,700 to 630,000)46,500 (17,700 to 65,800)13 (2.9 to 58)
 Unvaccinated adults172000 (79,000 to 208,000)158,000 (37,700 to 204,000)14,000 (3,860 to 42,500)8.2 (1.9 to 53)
Deathsa
 All age groups30,100 (12,900 to 39,000)27,200 (6,230 to 38,000)2,870 (1,020 to 6,740)9.6 (2.6 to 52)
 5–11 yrs old22.0 (7.79 to 31.0)3.53 (0.589 to 6.24)18.5 (7.19 to 24.8)84 (80 to 93)
 Vaccinated adults1,830 (289 to 3680)1,590 (133 to 3,560)241 (103 to 333)13 (3.3 to 58)
 Unvaccinated adults28,200 (12,300 to 35,600)25,600 (6,060 to 34,800)2,610 (893 to 6,500)9.3 (2.5 to 51)
MIS-C cases (0–19 yrs old)230 (82.9 to 325)73.7 (8.19 to 178)157 (76.1 to 178)68 (45 to 91)
Vaccine-related adverse events
 Myocarditis20 (9.0 to 123)38 (18 to 237)−18 (−3 to −112)b−93 (−15 to −570)b
 Anaphylaxis22 (9.8 to 35)42 (19 to 68)−20 (−8.1 to −50)b−92 (−37 to −230)b

Due to acute COVID-19.

Negative sign indicates increase in cases with vaccination.

Numbers in the table represent estimate (95% confidence interval).

TABLE 2

Simulation for Alberta (ℛ0 = 5.08), including projected differences in cases, hospitalizations, deaths due to COVID-19, multisystem inflammatory syndrome in children (MIS-C), and vaccine adverse events associated with childhood vaccination

ParameterNo. of patients with childhood vaccinationNo. of patients with childhood vaccination (80% coverage)No. of patients with absolute reductionRelative reduction (%)
Cases of COVID-19 (×1,000)
 All age groups1,950 (788 to 2,870)1,750 (595 to 2,760)206 (114 to 237)11 (4 to 25)
 5–11 yrs old97.3 (45.8 to 140)34.6 (9.16 to 78.1)62.7 (36.7 to 72.7)64 (43 to 82)
 Vaccinated adults1,190 (284 to 1,990)1,090 (217 to 1,950)104 (35.5 to 129)8.7 (1.9 to 24)
 Unvaccinated adults608 (405 to 667)575 (327 to 654)33.3 (12.6 to 76.8)5.5 (1.9 to 19)
Hospitalizationsa
 All age groups76,800 (27,100 to 123,000)70,600 (21,700 to 120,000)6,180 (2,770 to 7,900)8 (2.2 to 21)
 5–11 yrs old10.5 (4.92 to 15)3.72 (0.984 to 8.39)6.74 (3.94 to 7.81)64 (43 to 82)
 Vaccinated adults55,200 (12,500 to 98,800)50,000 (9,510 to 96,000)5,210 (2,260 to 6,210)9.4 (2.6 to 24)
 Unvaccinated adults21,600 (13,800 to 24,400)20,600 (11,300 to 24,200)959 (247 to 2,460)4.4 (1 to 18)
Deathsa
 All age groups3,870 (2,540 to 4,570)3,700 (2,160 to 4,500)177 (63.4 to 376)4.6 (1.4 to 15)
 5–11 yrs old3.04 (1.48 to 4.32)0.61 (0.286 to 0.964)2.43 (1.2 to 3.36)80 (78 to 81)
 Vaccinated adults259 (57 to 512)234 (42.7 to 498)25.2 (11.5 to 30.6)9.7 (2.9 to 24)
 Unvaccinated adults3,610 (2,450 to 4,090)3,460 (2,090 to 4,040)149 (46.7 to 358)4.1 (1.1 to 15)
MIS-C cases (0–19 yrs old)30.7 (14.5 to 44.2)10.9 (2.89 to 24.7)19.8 (11.6 to 23)64 (43 to 82)
Vaccine-related adverse events
 Myocarditis2.8 (1.3 to 18)5.8 (2.8 to 36)−3.0 (−0.48 to −18)b−105 (−17 to −650)b
 Anaphylaxis3.1 (1.4 to 5.1)6.4 (2.9 to 10)−3.3 (−1.3 to −8.1)b−105 (−42 to −260)b

Due to acute COVID-19.

Negative sign indicates increase in cases with vaccination.

Numbers in the table represent estimate (95% confidence interval).

FIG 1

Projected wave of SARS-CoV-2 in Australia without (solid lines) and with (dashed lines) childhood vaccination (80% of children under 12 years of age). Using the SIR model, the epidemic curve was modeled over 1 year. (A to L) Results for the population (all age groups) are shown (A to C) and subdivided according to age and vaccine classes as follows: children under 12 (D to F), vaccinated adults (G to I), and unvaccinated adults (J to L). Model outcomes included daily incident cases (A, D, G, and J), hospitalizations (B, E, H, and K), and deaths (C, F, I, and L). The expected waves of cases, hospitalizations, and deaths was reflected in the model, with modest reductions associated with childhood vaccination. Hospitalizations and deaths were infrequent in children under 12.

Simulation for Australia (ℛ0 = 5.08, 80% of adults vaccinated), including projected differences in cases, hospitalizations, deaths due to COVID-19, multisystem inflammatory syndrome in children (MIS-C), and vaccine adverse events associated with childhood vaccination Due to acute COVID-19. Negative sign indicates increase in cases with vaccination. Numbers in the table represent estimate (95% confidence interval). Simulation for Alberta (ℛ0 = 5.08), including projected differences in cases, hospitalizations, deaths due to COVID-19, multisystem inflammatory syndrome in children (MIS-C), and vaccine adverse events associated with childhood vaccination Due to acute COVID-19. Negative sign indicates increase in cases with vaccination. Numbers in the table represent estimate (95% confidence interval). Projected wave of SARS-CoV-2 in Australia without (solid lines) and with (dashed lines) childhood vaccination (80% of children under 12 years of age). Using the SIR model, the epidemic curve was modeled over 1 year. (A to L) Results for the population (all age groups) are shown (A to C) and subdivided according to age and vaccine classes as follows: children under 12 (D to F), vaccinated adults (G to I), and unvaccinated adults (J to L). Model outcomes included daily incident cases (A, D, G, and J), hospitalizations (B, E, H, and K), and deaths (C, F, I, and L). The expected waves of cases, hospitalizations, and deaths was reflected in the model, with modest reductions associated with childhood vaccination. Hospitalizations and deaths were infrequent in children under 12. Circulation of SARS-CoV-2 strains with different transmissibility could alter model predictions. We therefore ran the model assuming an ℛ0 of 2.79, corresponding to the alpha variant (Table S1 in the supplemental material). We also examined the scenario in which a higher proportion of adults was vaccinated (90%) (Table S2). Simulation for Australia (ℛ0 = 2.79, 80% of adults vaccinated). Projected differences in cases, hospitalizations, deaths due to COVID-19, multisystem inflammatory syndrome in children (MIS-C), and vaccine adverse events associated with childhood vaccination. Download Table S1, DOCX file, 0.02 MB. Simulation for Australia (ℛ0 = 5.08, 90% of adults vaccinated): Projected differences in cases, hospitalizations, deaths due to COVID-19, multisystem inflammatory syndrome in children (MIS-C), and vaccine adverse events associated with childhood vaccination. Download Table S2, DOCX file, 0.01 MB. Next, we performed sensitivity analyses to examine how model outputs varied with (i) the proportion of children vaccinated, and (ii) the intensity of concurrent public health measures. As the proportion of children vaccinated was varied between 0 and 1, an approximately linear relationship was observed in the reduction in cases, hospitalizations, and deaths across all age and vaccine classes (Fig. S1). As the intensity of concurrent public health measures was varied, we found a nonlinear relationship, with a local maximum in the reduction in cases at intermediate values of “social distancing” index (θ) (Fig. S2). A qualitatively similar pattern was observed for hospitalizations and deaths in all age and vaccine classes (Fig. S3). Sensitivity analysis of relative reduction in cases, hospitalizations, and deaths, varying the proportion of children vaccinated. The relative (percent) reduction in daily incident cases (A, D, G, and J), hospitalizations (B, E, H, and K), and deaths (C, F, I, and L) for all age groups (A to C), children under 12 (D to F), vaccinated adults (G to I), and unvaccinated adults (J to L) are shown with various childhood vaccination rate. Of note, larger relative effects are seen in children (directly protected through vaccination) than adults (indirectly protected through increased herd immunity) over the range of vaccine uptake. The linear relationship predicts proportional reductions in cases, hospitalizations, and deaths with increasing vaccine uptake, with greatest relative reductions in hospitalizations and deaths in the under 12 age group (E and F) and more modest relative reductions in other age and vaccine classes. Download FIG S1, PDF file, 0.01 MB. Sensitivity analysis. Total cases (over 1 year of epidemic) vary with the intensity of public health prevention measures, as well as childhood vaccination. The solid black line indicates the scenario with no childhood vaccination, the dashed line indicates the scenario with 80% children vaccinated, and the solid red line indicates the relative (percent) reduction. The parameter theta (θ) was used to model changes in the contact rate with public health measures (e.g., social distancing, masking, business and service closures) that will likely continue to be necessary with the highly contagious delta variant (ℛ0 = 5.08). In the absence of any control measures (θ = 1), the SIR model predicted that a large fraction of the population (N, 25 million) would become infected over the course of the epidemic fourth wave despite high vaccine coverage. The fraction of infected individuals decreased nonlinearly with increasing public health measures. The effect of childhood vaccination was to qualitatively “shift” the curve toward the right. The relative reduction in cases with childhood vaccination yielded a curve with a local maximum around θ of 0.5. This interaction between vaccine coverage and intensity of public health measures can be explained as follows: with strict lockdown, transmission is low, and the epidemic is extinguished and is barely influenced by childhood vaccination; without control measures, transmission of highly infectious delta variant is not prevented by vaccinating children (a small fraction of the total population), but when moderate control measures are in place, reducing the effective reproduction number to near unity (ℛ* ≈ 1), the added benefit of childhood vaccination can “tip” the epidemic toward extinction, yielding a large relative reduction in total cases. Download FIG S2, PDF file, 0.01 MB. Sensitivity analysis of relative reduction in cases, hospitalizations and deaths, varying the intensity of public health measures. By varying theta (θ), a parameter used to model changes in the contact rate with public health measures, from 0 (complete lockdown) to 1 (perfect mixing), we estimated the relative reduction in incident cases (A, D, G, and J), hospitalizations (B, E, H, and K), and deaths (C, F, I, and L) for all age groups (A to C), children under 12 (D to F), vaccinated adults (G to I), and unvaccinated adults (J to L). Model estimates for relative reduction in cases, hospitalizations, and deaths were sensitive to θ, reaching a local maximum around θ of 0.5. This suggests that childhood vaccination and public health measures interact, yielding maximal combined effectiveness at intermediate levels of social distancing. Download FIG S3, PDF file, 0.01 MB.

DISCUSSION

In light of the recent introduction of childhood vaccination against SARS-CoV-2, we forecast the effect on child and adult COVID-19 cases, hospitalizations, deaths, complications, and vaccine adverse events in two jurisdictions. Based on our mathematical model (Tables 1 and 2), several observations can be made for children 5 to 11 years of age as follows: (i) high relative (percent) reduction in hospitalizations and deaths; (ii) lower relative reduction in cases because of imperfect vaccine efficacy for prevention of transmission (8); (iii) the absolute reduction in hospitalizations, deaths, and MIS-C was small, given the rarity of these events, even in unvaccinated children (9); and (iv) cases of vaccine-associated myocarditis and anaphylaxis were few (10). For adults, modest herd immunity effects were observed, with relative reduction in hospitalizations and deaths on the order of 8 to 13%. Nonetheless, these correspond to nontrivial reductions in absolute numbers of hospitalizations (∼3,700) and deaths (∼170), mostly among the unvaccinated. Cases of vaccine-associated myocarditis and anaphylaxis were predicted to increase, though case counts remained low. In addition to projected population health impact, public acceptability will likely play an important role in the implementation of childhood vaccination against SARS-CoV-2. Seasonal influenza provides a benchmark vaccine-preventable respiratory virus against which SARS-CoV-2 public health impacts and vaccination can be compared. There were 349 SARS-CoV-2-related deaths in the first 19 months of the SARS-CoV-2 pandemic in the United States and 116 influenza deaths in the 2019 to 2020 season, respectively (11, 12). Currently, many children in Australia and Alberta do not receive vaccination for seasonal influenza, suggesting that a substantial fraction of parents would be similarly reluctant to vaccinate their children against COVID-19. Ethical considerations also arise around childhood vaccination. As shown in our model, by vaccinating children, they are benefiting the rest of the community. The argument in favor of this perspective is, however, difficult to prosecute because the people they will be protecting are those older individuals who refuse to be vaccinated or the small percentage of vaccinated people in whom the vaccine is ineffective. An additional ethical question is that of global social justice when administering vaccines to children in high-income settings while vulnerable elderly populations have limited access to vaccine in low-resource settings. A higher relative impact of childhood vaccination (20 to 30% reduction in overall cases, hospitalizations, and deaths) was observed in models using the SARS-CoV-2 alpha variant with lower transmissibility (ℛ0 = 2.79) (Table S1; Text S2) and a higher baseline proportion of vaccinated adults (90%) (Table S2). Moreover, childhood vaccination interacted synergistically with public health measures (θ) to produce a peak relative reduction in cases at intermediate values of θ (Fig. S2). Taken together, these model predictions illustrate that under less intense epidemic conditions (when the effective reproduction rate, ℛ*, is greater than, but close to, 1), modest reductions in the susceptible fraction (as occurs with childhood vaccination) can drive the epidemic toward extinction (ℛ* < 1), resulting in large relative reductions in the disease burden. On the other hand, when ℛ* is high, exponential growth continues with the modest reductions in transmission associated with childhood vaccination; therefore, the relative reduction in disease burden is minor. When ℛ* is less than 1, the epidemic trends toward extinction with or without childhood vaccination; therefore, the relative reduction in disease burden is again minor. The implication for immunization programs is that childhood vaccination likely has the greatest potential for population-wide impact when coupled with other measures (e.g., social distancing, masking, adult vaccination). Model predictions for a different SARS-CoV-2 strain (alpha variant), model predictions for higher vaccination rate among adults, sensitivity analysis of proportion of children vaccinated, and sensitivity analysis of intensity of concurrent public health measures. Download Text S2, DOCX file, 0.01 MB. Our modeling study has several limitations. The model was based on a deterministic compartmental susceptible-infected-recovered (SIR) model; thus, stochastic effects were not considered (13). The system of 49 ordinary differential equations (ODEs) was parameterized with vital statistics from Australia or Alberta; therefore, extrapolation to other regions should be done with caution. On the other hand, the age structure and age-specific mortality rates were similar to other high-income, urbanized settings. Age-assortative mixing was incorporated into the model using social contact matrices; however, these were based on prepandemic surveys (14). Other investigators have demonstrated changes in contact rate with evolution of the pandemic and have considered context-specific changes in contact rates (e.g., school closures) (15, 16). We used a composite social distancing index (θ) to capture the combined effects of physical isolation, face masks, and improved hand hygiene on the contact rate (7). This represents a simplification but is justified in the absence of data on the efficacy and uptake of various public health interventions in different age groups. The duration of infection prior to death or recovery was assumed to follow an exponential distribution. Recovered individuals in our model were considered immune (removed permanently from the susceptible pool); we did not incorporate waning immunity in the model. More complex mathematical formulations would be needed to reflect alternative distributions of the duration of infection and immunity. The cocirculation of several virus strains with different transmissibility was not incorporated into the model; however, for the simulation in Australia, we separately considered scenarios with circulating alpha variant (ℛ0 = 2.79) and delta variant (ℛ0 = 5.03). Vaccine efficacy may differ between strains of SARS-CoV-2, which could alter the model predictions. The impact of other vaccines (e.g., adenovirus-vectored vaccines) was not included in the model; however, mRNA vaccines are the primary vaccine product offered in Australia and Alberta currently. In summary, our modeling results suggest that childhood vaccination yields modest benefits with minimal risk. Vaccination is predicted to result in substantial relative reductions in child morbidity and mortality, although the absolute reduction is small because these events are rare. Furthermore, the model predicts “altruistic” absolute reductions in adult cases, hospitalizations, and mortality, particularly among the unvaccinated, in whom the risk of these adverse outcomes is high.

MATERIALS AND METHODS

Description of the model and model parameters.

We used a deterministic susceptible-infected-recovered (SIR) compartmental model with age structure (seven strata, under 5 years of age, 5 to 11, 12 to 19, 20 to 39, 40 to 59, 60 to 74, and 75 and older) and vaccine with imperfect efficacy (Text S1). The flowchart for this model is shown in Fig. 2. This model accounts for vital dynamics, births (Λ), aging between strata (α), and age-specific natural death rate (μ). The model includes the following infection parameters: standard incidence ratio (β), contact rate based on published social contact matrices (14) (cmij), age-specific relative infectiousness (τ), age-specific relative susceptibility to infection (σ), duration of infection (1/δ), and age-specific infection fatality rate (f). The effect of vaccination was modeled as relative reduction in infectiousness (ετ), susceptibility to acquiring infection (εσ), probability of hospitalization (ε), and mortality (ε). To model the changes in the contact rate due to public health measures, we used a social distancing parameter, θ, which varied from zero (complete lockdown) to 1 (complete mixing in the population), as described in a previous modeling study (7). The mathematical properties of this model have been previously discussed (13).
FIG 2

Flowchart for model. The susceptible-infected-recovered (SIR) compartmental model was divided into 7 age classes. This allowed us to incorporate age-specific parameters in the model, including birth rate (Λ), aging between strata (α), natural mortality rates (μ), social contact matrix (cm), relative infectiousness with SARS-CoV-2 (τ), relative susceptibility (σ), hospitalization (h), and fatality rates (f). Estimates for the transmission rate (β) and the duration of infection (1/δ) were taken from previous studies. A parameter theta (θ), reflecting the intensity of public health measures to prevent transmission (e.g., social distancing, mask mandates, service closures) was included to account for reduction in the contact rate from the assumption of perfect mixing. The effect of vaccination was modeled by four parameters, including proportional reduction in infectiousness (ετ), susceptibility (εσ), hospitalization (ε), and mortality (ε).

Flowchart for model. The susceptible-infected-recovered (SIR) compartmental model was divided into 7 age classes. This allowed us to incorporate age-specific parameters in the model, including birth rate (Λ), aging between strata (α), natural mortality rates (μ), social contact matrix (cm), relative infectiousness with SARS-CoV-2 (τ), relative susceptibility (σ), hospitalization (h), and fatality rates (f). Estimates for the transmission rate (β) and the duration of infection (1/δ) were taken from previous studies. A parameter theta (θ), reflecting the intensity of public health measures to prevent transmission (e.g., social distancing, mask mandates, service closures) was included to account for reduction in the contact rate from the assumption of perfect mixing. The effect of vaccination was modeled by four parameters, including proportional reduction in infectiousness (ετ), susceptibility (εσ), hospitalization (ε), and mortality (ε). Age-structured SIR model parameters, characteristics of SARS-CoV-2 mRNA vaccine that inform model parameters, multisystem inflammatory syndrome in children (MIS-C), and vaccine adverse events. Download Text S1, DOCX file, 0.02 MB. Parameter estimates are shown in Table 3. We used realistic estimates based on vital statistics in Australia and Alberta, as well as biological characteristics of SARS-CoV-2. We modeled both the currently dominant and highly infectious delta variant (ℛ0 = 5.08) and the historically important alpha variant (ℛ0 = 2.79).
TABLE 3

Model parameters: values and rationale

ParameterEstimateValuecReference
Λ
 Birth rate
143 day−1 (Alberta)52,334 births in Alberta (2018)a 21
863 day−1 (Australia)315,147 births in Australia (2018)a
Population age structure (millions [%])
 Vital statistics
  Australia 22
   N11.5 (5.9)<5
   N22.3 (8.9)5–11
   N32.5 (9.5)12–19
   N47.4 (29)20–39
   N56.4 (25)40–59
   N63.8 (15)60–74
   N71.8 (7.1)≥75
   NT25.7 (100)Total
  Alberta 17
   N10.27 (6.6)<5
   N20.37 (9.1)5–11
   N30.39 (9.5)12–19
   N41.2 (30)20–39
   N51.1 (27)40–59
   N60.52 (13)60–74
   N70.21 (5.2)≥75
   NT4.1 (100)Total
Aging rate from class i to i + 1 (per yr)a
 α00 13
 α11/5<5
 α21/75–11
 α31/812–19
 α41/2020–39
 α51/2040–59
 α61/1560–74
 α70≥75 (oldest class)
Natural mortality rate (no. per 1,000 population per yr)
 Vital statistics
  Australia 22
   μ11.1<5
   μ20.105–11
   μ30.2212–19
   μ40.6320–39
   μ52.540–59
   μ69.860–74
   μ754≥75
  Alberta 17
   μ11.1<5
   μ20.105–11
   μ30.2212–19
   μ40.8820–39
   μ52.840–59
   μ61160–74
   μ764≥75
Age-specific relative susceptibility to SARS-CoV-2
 σ10.34<5 16
 σ20.345–11
 σ30.7512–19
 σ41.0 (reference)20–39
 σ51.0 (reference)40–59
 σ61.2660–74
 σ71.47≥75
Age-specific relative infectiousness
 τ10.85<5 23
 τ20.855–11
 τ30.8512–19
 τ41.0 (reference)20–39
 τ51.0 (reference)40–59
 τ61.0 (reference)60–74
 τ71.0 (reference)≥75
SARS-CoV-2 hospitalization rate (%)
h10<5 9
h20.0115–11
h30.04112–19
h42.320–39
h56.240–59
h61260–74
h716≥75
SARS-CoV-2 infection mortality rate (%)
f10.0016<5 9
f20.00305–11
f30.007012–19
f40.05920–39
f50.3840–59
f62.460–74
f76.4≥75
Model parameters (%)b
 β0.027Estimated based on ℛ0 = 5.08, δ = 1/14 days, and avg contact rate of 13 per day14, 24
 δ1/14 days−1Mean duration of infection, 14 days to recovery or death 9
 θ0.75Varied between 0 (complete lockdown) to 1 (perfect mixing) in sensitivity analysis 7
Vaccine efficacy (% [95%CI])
 εσ67 (37–83)Reduction in susceptibility 8
 ετ27 (0–62)Reduction in infectiousness 8
 εh86 (82–88)Prevention of hospitalization 20
 εf96.7 (96.0–97.3)Prevention of fatality 3

Ages are based on time in each age class.

β, Standard incidence ratio; δ, rate of recovery from infection; θ, social distancing parameter.

Data in the “Value” column represent years of age unless otherwise indicated.

Model parameters: values and rationale Ages are based on time in each age class. β, Standard incidence ratio; δ, rate of recovery from infection; θ, social distancing parameter. Data in the “Value” column represent years of age unless otherwise indicated. A system of 49 ordinary differential equations (ODEs) describes the flow between compartments: For i = 2,…,7, For i = 1,2,…,7,

Initial conditions and time horizon.

To model the course of a future “wave” of SARS-CoV-2, we began with initial conditions which included the total population of Australia or Alberta, divided into age classes, and further subdivided into vaccinated and unvaccinated compartments (17). The proportion of actively infected individuals was calculated based on the number of known active cases in Australia or Alberta in August 2021, proportionally divided among the age classes. We assumed that all these cases would be isolated and, therefore, would not contribute to the infectious pool. We further assumed that a 5-fold higher number of undiagnosed cases would be present in the community. This assumption is based on a previous study, which estimated that the number of infections in the United States was 3 to 20 times higher than the number of confirmed cases (4). The proportion of recovered individuals was based on seroprevalence surveys (18, 19). In hypothetical scenarios for Australia, 80% or 90% of adults were presumed to be vaccinated at baseline. In the Alberta scenario, the proportion of vaccinated individuals in each age stratum in October 2021 was used as the baseline. The model was run with no childhood vaccination and with 80% childhood vaccination. The model was run for a period of 365 days. In the absence of an analytical solution to the system of ODEs, we used numerical simulations (package deSolver) in the R statistical environment (R version 3.6.2).

Confidence intervals for model outputs.

To account for uncertainties in the vaccine efficacy, we used a multiway sensitivity analysis, varying the four key parameters (efficacy to prevent transmission, susceptibility, hospitalization, and death) over their 95% confidence interval, based on published studies (3, 8, 20). We assumed that each proportion followed a beta distribution. We randomly sampled from the distribution of each parameter, used these as inputs for the model, and ran the SIR model 1,000 times. Using the distribution of model outputs that was generated, the 95% confidence interval for each output was defined by the 2.5th percentile and the 97.5th percentile.

Variation of model estimates with vaccine uptake and concurrent public health measures.

The proportion of vaccinated children and public health measures may vary widely over time and geography. Therefore, we varied these key parameters from 0 to 1 (over the entire possible range) and plotted the resulting model outputs. Graphical methods were used to examine the dependence of model outputs on key parameters.
  20 in total

1.  Deaths in Children and Adolescents Associated With COVID-19 and MIS-C in the United States.

Authors:  David W McCormick; LaTonia Clay Richardson; Paul R Young; Laura J Viens; Carolyn V Gould; Anne Kimball; Talia Pindyck; Hannah G Rosenblum; David A Siegel; Quan M Vu; Ken Komatsu; Heather Venkat; John J Openshaw; Breanna Kawasaki; Alan J Siniscalchi; Megan Gumke; Andrea Leapley; Melissa Tobin-D'Angelo; Judy Kauerauf; Heather Reid; Kelly White; Farah S Ahmed; Gillian Richardson; Julie Hand; Kim Kirkey; Linnea Larson; Paul Byers; Ali Garcia; Mojisola Ojo; Ariela Zamcheck; Maura K Lash; Ellen H Lee; Kathleen H Reilly; Erica Wilson; Sietske de Fijter; Ozair H Naqvi; Laurel Harduar-Morano; Anna-Kathryn Burch; Adele Lewis; Jonathan Kolsin; Stephen J Pont; Bree Barbeau; Danae Bixler; Sarah Reagan-Steiner; Emilia H Koumans
Journal:  Pediatrics       Date:  2021-08-12       Impact factor: 7.124

2.  Update: Influenza Activity in the United States During the 2017-18 Season and Composition of the 2018-19 Influenza Vaccine.

Authors:  Rebecca Garten; Lenee Blanton; Anwar Isa Abd Elal; Noreen Alabi; John Barnes; Matthew Biggerstaff; Lynnette Brammer; Alicia P Budd; Erin Burns; Charisse N Cummings; Todd Davis; Shikha Garg; Larisa Gubareva; Yunho Jang; Krista Kniss; Natalie Kramer; Stephen Lindstrom; Desiree Mustaquim; Alissa O'Halloran; Wendy Sessions; Calli Taylor; Xiyan Xu; Vivien G Dugan; Alicia M Fry; David E Wentworth; Jacqueline Katz; Daniel Jernigan
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2018-06-08       Impact factor: 17.586

3.  Estimates of the severity of coronavirus disease 2019: a model-based analysis.

Authors:  Robert Verity; Lucy C Okell; Ilaria Dorigatti; Peter Winskill; Charles Whittaker; Natsuko Imai; Gina Cuomo-Dannenburg; Hayley Thompson; Patrick G T Walker; Han Fu; Amy Dighe; Jamie T Griffin; Marc Baguelin; Sangeeta Bhatia; Adhiratha Boonyasiri; Anne Cori; Zulma Cucunubá; Rich FitzJohn; Katy Gaythorpe; Will Green; Arran Hamlet; Wes Hinsley; Daniel Laydon; Gemma Nedjati-Gilani; Steven Riley; Sabine van Elsland; Erik Volz; Haowei Wang; Yuanrong Wang; Xiaoyue Xi; Christl A Donnelly; Azra C Ghani; Neil M Ferguson
Journal:  Lancet Infect Dis       Date:  2020-03-30       Impact factor: 25.071

4.  Changes in contact patterns shape the dynamics of the COVID-19 outbreak in China.

Authors:  Marco Ajelli; Hongjie Yu; Juanjuan Zhang; Maria Litvinova; Yuxia Liang; Yan Wang; Wei Wang; Shanlu Zhao; Qianhui Wu; Stefano Merler; Cécile Viboud; Alessandro Vespignani
Journal:  Science       Date:  2020-04-29       Impact factor: 47.728

5.  Substantial underestimation of SARS-CoV-2 infection in the United States.

Authors:  Sean L Wu; Andrew N Mertens; Yoshika S Crider; Anna Nguyen; Nolan N Pokpongkiat; Stephanie Djajadi; Anmol Seth; Michelle S Hsiang; John M Colford; Art Reingold; Benjamin F Arnold; Alan Hubbard; Jade Benjamin-Chung
Journal:  Nat Commun       Date:  2020-09-09       Impact factor: 14.919

6.  Assessing relative COVID-19 mortality: a Swiss population-based study.

Authors:  Torsten Hothorn; Matthias Bopp; Huldrych Günthard; Olivia Keiser; Maroussia Roelens; Caroline E Weibull; Michael Crowther
Journal:  BMJ Open       Date:  2021-03-08       Impact factor: 2.692

7.  Impact and effectiveness of mRNA BNT162b2 vaccine against SARS-CoV-2 infections and COVID-19 cases, hospitalisations, and deaths following a nationwide vaccination campaign in Israel: an observational study using national surveillance data.

Authors:  Eric J Haas; Frederick J Angulo; John M McLaughlin; Emilia Anis; Shepherd R Singer; Farid Khan; Nati Brooks; Meir Smaja; Gabriel Mircus; Kaijie Pan; Jo Southern; David L Swerdlow; Luis Jodar; Yeheskel Levy; Sharon Alroy-Preis
Journal:  Lancet       Date:  2021-05-05       Impact factor: 79.321

8.  Preliminary estimation of the basic reproduction number of novel coronavirus (2019-nCoV) in China, from 2019 to 2020: A data-driven analysis in the early phase of the outbreak.

Authors:  Shi Zhao; Qianyin Lin; Jinjun Ran; Salihu S Musa; Guangpu Yang; Weiming Wang; Yijun Lou; Daozhou Gao; Lin Yang; Daihai He; Maggie H Wang
Journal:  Int J Infect Dis       Date:  2020-01-30       Impact factor: 3.623

9.  The Interaction of Natural and Vaccine-Induced Immunity with Social Distancing Predicts the Evolution of the COVID-19 Pandemic.

Authors:  Michael F Good; Michael T Hawkes
Journal:  mBio       Date:  2020-10-23       Impact factor: 7.867

10.  The reproductive number of the Delta variant of SARS-CoV-2 is far higher compared to the ancestral SARS-CoV-2 virus.

Authors:  Ying Liu; Joacim Rocklöv
Journal:  J Travel Med       Date:  2021-10-11       Impact factor: 8.490

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