A series of different cores and nuclearity zinc metal clusters 1-5 have been synthesized using Zn(ClO4)2·6H2O, Schiff-base primary ligands, and dibenzoyl methane (DBM) or monoethanolamine (MEA) as co-ligand in a room-temperature reaction. The structure of the complexes is characterized using single-crystal X-ray diffraction. Among them, (1) [Zn(L1)(DBM)] is mononuclear; (2) [Zn4(L2)2(DBM)4], (3) [Zn4(L2)4(H2O)2(ClO4)2]·2CH2Cl2, and (4) [Zn4(L3)2(DBM)4] have a cubane core; and (5) [Zn4(L4)4(MEA)2(ClO4)2] has a ladderlike core structure. Compounds 1-5 have also been characterized using UV-vis absorption and emission spectroscopies. For an in-depth understanding of the absorption spectra of 1 and 3, density functional theory (DFT) calculations have been performed, which suggest that the transitions correspond to the π → π* intraligand charge transfer (ILCT) transitions.
A series of different cores and nuclearity zinc metal clusters 1-5 have been synthesized using Zn(ClO4)2·6H2O, Schiff-base primary ligands, and dibenzoyl methane (DBM) or monoethanolamine (MEA) as co-ligand in a room-temperature reaction. The structure of the complexes is characterized using single-crystal X-ray diffraction. Among them, (1) [Zn(L1)(DBM)] is mononuclear; (2) [Zn4(L2)2(DBM)4], (3) [Zn4(L2)4(H2O)2(ClO4)2]·2CH2Cl2, and (4) [Zn4(L3)2(DBM)4] have a cubane core; and (5) [Zn4(L4)4(MEA)2(ClO4)2] has a ladderlike core structure. Compounds 1-5 have also been characterized using UV-vis absorption and emission spectroscopies. For an in-depth understanding of the absorption spectra of 1 and 3, density functional theory (DFT) calculations have been performed, which suggest that the transitions correspond to the π → π* intraligand charge transfer (ILCT) transitions.
Multicomponent reactions
of 3d and 4f elements with multidentate
organic/main group elements based on ligands containing donating heteroatoms
have been exploited in detail due to their interesting and complex
coordination behaviors.[1] Our interest in
this area has been established from a series of multinuclear clusters
using phosphinate/phosphonate- and organostibonate-based ligand systems
that have yielded structurally fascinating molecular clusters of transition
metal ions[2] and lanthanides,[3] some of which have shown interesting magnetic
properties such as single-molecule magnet (SMM) behavior.[4] We have recently shown the assembly of titanium-based
multinuclear clusters, one of which shows interesting structural properties
such as fluxional behavior at room temperature.[5] Moreover, we have also recently shown a designed approach
for reducing band gaps by synthesizing Ti4Sb2-based heteronuclear clusters from a parent Sb6 molecular
framework using solvothermal reaction conditions.[6] We have also been using multidentate donating ligands such
as Schiff-base ligands due to their adjustable coordination properties
and flexible bridging modes.[7] Using Schiff
base/modified vanillin-based Schiff bases, several multinuclear complexes
of d/f block elements have been reported.[8] Notable reports among them are multinuclear dysprosium-based clusters
reported by Murugesu et al., who synthesized a series of tetranuclear
butterfly core-containing dysprosium clusters, and the magnetic measurements
revealed that some of these clusters displayed a high energy barrier
for reversal of magnetization.[9] In this
backdrop, Schiff-base ligands have been used for synthesizing zinc-based
multinuclear clusters, some of which have shown interesting applications
as polymerization catalysts,[10] reagents
in organic synthesis,[11] molecular precursors
for ZnO-based materials,[12] models of the
active site in zinc enzymes,[13] and in synthesizing
functional molecule-based materials.[14] Some
of the molecular clusters of zinc reported in the literature are mononuclear,[15] binuclear,[16] trinuclear,[17] tetranuclear,[18] and
polynuclear clusters.[19] Some of these structural
forms, like the tetranuclear core cluster, have garnered special attention,
particularly the manganese-based tetranuclear clusters, which have
been involved in multielectron-transfer redox reactions of oxygen-evolving
complex (OEC) of PSII in green plants.[20]Herein, the synthesis and structural characterization of a
series
of zinc-based molecular clusters have been reported. By systematically
carrying out reactions of metal perchlorates in the presence/absence
of the co-ligand used and varying the length of the methylene side
chain incorporated in the modified Schiff bases used, different nuclearity-based
zinc clusters have been synthesized and structurally characterized.
Density functional theory (DFT) calculations have been performed to
understand better the electronic absorption spectra of clusters 1 and 3. The details of the study are presented
herein.
Results and Discussion
The complexes 1–5 were synthesized
as summarized in Scheme . In these reactions, different chain lengths containing Schiff-base
ligands have been employed with (1, 2, 4, 5) and without (3) auxiliary
ligands such as dibenzoyl methane (DBM)/monoethanolamine(MEA) in a
mix-solvent methanol–acetonitrile (1:1) medium and triethylamine
as a base. All of the Schiff-base ligands L1, L2, L3, and L4 were
prepared in an in situ reaction. Ligands L1 and L3 have two oxygen
and one nitrogen (O2N) as a coordinating group, and ligands
L2 and L4 have three oxygen and one nitrogen (O3N) as a
coordinating group. Hence, these diprotic (L1, L2, L3, L4) ligands
have multiple pairs of electrons to form coordination complexes where
ligands can bind between metal atoms as a chelating or bridging mode
(Table S2). We report the synthesis and
structural characterization of mononuclear and tetranuclear (cube,
ladderlike) coordination complexes using these Schiff-base ligands
and co-ligands as mixed ligand systems.
Scheme 1
Synthesis of Zinc
Schiff Base Complexes 1–5
Synthesis
Procedure Followed for Synthesizing These Complexes
Is Detailed Below
In all of the cases, ligands and co-ligands
were taken in a solvent mixture (methanol–acetonitrile), and
a metal salt (zinc perchlorate hexahydrate) was added followed by
dropwise addition of triethylamine base and left for 6 h under stirring,
except for 2, which was stirred for 24 h. The following
ligands and co-ligands were used for synthesis. For 1, salicylaldehyde, monoethanolamine (MEA), and DBM; 2, o-vanillin, 3-aminopropanol, and DBM; 3, o-vanillin and 3-aminopropanol; for 4, salicylaldehyde, 3-aminopropanol, and DBM; and for 5, o-vanillin and ethanolamine. Different methods
are used for crystallization as described. 1 was synthesized
by stirring ethanolamine, salicylaldehyde, dibenzoyl methane (DBM),
zinc perchlorate hexahydrate, and triethylamine in a 1:1:1:1:3 molar
ratio in a methanol–acetonitrile (1:1) solvent mixture for
6 h (Scheme ). The
clear yellowish solution was filtered and the volume was reduced to
half. Yellowish rod-shaped crystals were obtained overnight. 2 was synthesized by stirring 3-aminopropanol, o-vanillin, DBM, zinc perchlorate hexahydrate, and triethylamine in
a 1:1:1:1:3 molar ratio in a methanol–acetonitrile (1:1) solvent
mixture for 24 h to maximize the yield of the product (Scheme ). In the yellow solution,
a white precipitate was observed. The precipitate was filtered and
dried. Compound 2 was obtained by the chloroform/hexane
diffusion method as white crystals in a week′s time. 3 was synthesized in the same as 2, only here
DBM was not used. A clear yellowish solution was observed at the end
of the reaction, which was filtered and evaporated. After evaporating
the solvent, the sticky, oily liquid was dissolved in DCM, and diffusing
hexane yielded crystals of 3 within 2 weeks. Compound 4 was synthesized in the same as compound 2,
the difference being salicylaldehyde was used instead of o-vanillin. Crystals were obtained by the DCM/hexane layering method
at 0 °C. Compound 5 was synthesized by stirring o-vanillin, monoethanolamine, zinc perchlorate hexahydrate,
and triethylamine in a 1:1.5:1:3 molar ratio in a methanol–acetonitrile
(1:1) solvent mixture for 6 h. The clear yellowish solution was filtered
and evaporated. From DCM/hexane layering at 0 °C, we obtained
X-ray quality crystals.All of the compounds (1–5) were characterized using standard analytical and spectroscopic
techniques. Thermal gravimetric analysis (TGA) was carried out under
a nitrogen atmosphere to study the thermal stability of the complexes.
The TGA study was performed in the presence of a nitrogen gas flow
rate of 20 mL/min and a heating rate of 10 °C/min from 30 to
800 °C. All of the TGA data have been included in the Supporting
Information (Figures S1–S5).In the IR spectra of 1–5, distinct bands due
to the azomethine (C=N) group are observed at 1591, 1596, 1614.49,
1594, 1627.55 cm–1, whereas the same bands appear
at 1630.00, 1630.82, 1629.89, and 1632.60 cm–1 for
free ligands L1–L4 (Table S4). The shift of these bands toward higher and lower
frequencies on complexation with the metal suggests coordination via
the imino nitrogen atom in all of the complexes.[21] The C–O phenolic mode is present as a very strong
band at about 1211–1272 cm–1. The peaks in
the range of 1065–1066 cm–1 are assigned
to alcoholic C–O stretches. Several weak peaks observed for
complexes in the range of 3058–2859 cm–1 are
ascribed to the aliphatic and aromatic C–H stretches, and the
range of 717–744 cm–1 is attributed to the
C–H out-of-plane bending mode. Broad peaks are observed in
the range of 3205–3386 cm–1 due to the presence
of alcoholic OH groups. Sharp, strong, single peaks are observed at
1058.74 and 1054.61 cm–1 for the perchlorate ion
present in complexes 3 and 5, respectively.
The broad band at around 3483 cm–1 in compound 3 is assigned to the OH stretching vibration of the coordinated
water molecules, which are involved in hydrogen bonding.[22]The electronic spectra for 1–5 were recorded
in DMSO solvent in the range of 265–700 nm at room temperature
using the same solvent as that for the blank. The absorption maxima
were observed at 355, 353, 279 and 377, 355, and 280 and 379 nm, respectively,
for 1–5 (Figure ). 1, 2, and 4 show a similar
kind of absorption maxima where DBM is present, and 3 and 5 show a similar kind of absorption maxima where
DBM is absent and only Schiff base is present (Figures S13 and S15). This indicates the similar solution
behavior of the compounds. The electronic transition for 1,
2, and 4 might be due to the intraligand charge
transfer (ILCT).[23] Similarly, the electronic
transition for compounds 3 and 5, the two
observed bands, may arise from π → π ILCT.
Figure 1
UV–vis spectra of 1–5 in
solution state in DMSO at room temperature.
UV–vis spectra of 1–5 in
solution state in DMSO at room temperature.To understand in detail the electronic transition behavior of 1, 2, and 4, DFT calculations[24] for 1 were performed. DFT calculations show
that the transition corresponding to 352.79 nm is for the H-2 →
L/H-3 → L/H-4 → L/H-1 → L/H-6 → L molecular
orbital (MO) transition of an oscillator strength (f) of 0.0116, which is close to the experimental value of 355 nm (Table S5). The electron clouds of H-1, H-2, H-3,
H-4, and H-6 MOs are mainly located on the ligand moiety (Figure ), and LUMO (L) (Figure ) is also redistributed
throughout the ligand moiety, avoiding the metal atom Zn(II). These
imply the possibility of the intraligand charge transfer (ILCT) phenomenon. 3 was taken as a case study for 3, 5, and DFT calculations were performed. Analysis shows that the transitions
corresponding to 276.77 and 384.22 nm are for the significant contributing
orbital H-5 → L+1/H-8 → L+1/H-11 → L and H-1
→ L/H-1 → L+1/H → L/H → L+1 transitions
of oscillator strength (f) of 0.0169 and 0.0055,
respectively, are close to the experimental values of 279 and 377
nm (Table S5). The electronic clouds of
the MO mostly lie on the ligand orbitals (Figure S17), which suggests that the transitions correspond to the π → π ILCT.
Figure 2
Major contributing
molecular orbitals of compound 1 by TD-DFT (time-dependent-density
function theory) calculation.
Major contributing
molecular orbitals of compound 1 by TD-DFT (time-dependent-density
function theory) calculation.The fluorescence spectra of 1–5 (Figure ) were obtained
in DMSO solvent in the region of 350–700 nm by exciting at
375 nm, which implies that 1, 2, and 4 have similar kinds of emission spectra, and on the other
hand, 3 and 5 are similar. 1–5 exhibit only one emission peak at 447, 440,
481, 444, and 483 nm, respectively. In the cases of 1, 2, and 4, emission spectra are 19, 21,
and 7 nm blue-shifted blue emission, and for compounds 3 and 5, emission spectra are 20 and 29 nm red-shifted
cyan emission compared to free Schiff-base ligands (Figures S21–S25).
Figure 3
Emission spectra of compounds 1–5 in solution state in DMSO solvent at room
temperature.
Emission spectra of compounds 1–5 in solution state in DMSO solvent at room
temperature.
Structure of 1
1 crystallizes
in the orthorhombic P212121 space
group. The molecular structure of 1 (Figure ) contains one zinc (II) ion and one DBM
ligand. The penta-coordinated zinc(II) ion adopts a spherical square
pyramid geometry (by SHAPE analysis) (Table S16) with Schiff-base (L1) ligand (O1 N1 O4) and two DBM oxygen (O2
O3) donor groups. Both ligands are attached to zinc(II) in a chelating
mode. The Schiff-base ligand is monoprotonated, and the alkyl oxygen
atom of the hydroxyl group is not deprotonated (Figure ). The Zn1–O4 bond distance is 2.496(2)
Å, which is longer than the distances found in the literature
(Zn–O distance in the literature is 2.419(2) Å).[7a] The four coordination number found in 1 is quite common in the literature for O, N ligated Zn (II)
complexes. When the coordination number is increased from four to
five, the additional coordination is weak, with Zn (II)···O
distances between 2.341(10) and 2.912(12) Å, and the corresponding
geometry is highly distorted.[25] The selected
bond lengths, bond angles, and packing diagram are given in the Supporting
Information (Tables S6 and S7 and Figure S41, respectively).
Figure 4
Ball and stick view of the molecular structure of 1. Hydrogen atoms are removed for clarity. Blue, N; red, O;
black,
C; brown, H; and cyan, Zn.
Ball and stick view of the molecular structure of 1. Hydrogen atoms are removed for clarity. Blue, N; red, O;
black,
C; brown, H; and cyan, Zn.
Structure of 2
2 crystallizes
in the I2/a space group. The asymmetric crystallographic unit contains
two zinc(II) ions, an anionic Schiff-base ligand (L2), and two terminally
coordinating DBM anions (Figure a). The Zn(II)–O complex adopts a cubane core
(Figure a). The core
structure (Figure b) is stabilized by two Schiff-base ligands and four DBM molecules.
All of the zinc(II) ions in the core are hexacoordinated with slightly
distorted octahedral geometry. Zn1 is present in an O5N-donor
environment; among these, the coordination is from three bridging
oxygen (O3 O6* O3*) atoms, one nitrogen atom (N1*) from Schiff base,
and two terminal oxygen (O1* O2*) atoms from DBM. Another metal ion
Zn2 is coordinated with three bridging oxygen (O6 O3* O6*) atoms,
one methoxy oxygen (O7) from Schiff base, and two terminal oxygen
(O4 O5) atoms from DBM. The Schiff-base ligands bind to the zinc center
in a [4.3311] coordination mode, and DBM binds [1.11] based on Harris
notation.[26] The selected bond lengths,
bond angles, and packing diagram are given in the Supporting Information
(Tables S8 and S9 and Figure S42, respectively).
Figure 5
(a) Asymmetric
unit of 2 and (b) ball and stick view
of the molecular structure of 2. Hydrogen atoms are removed
for clarity. Blue, N; red, O; black, C; and cyan, Zn.
Figure 7
(a) Ball
and stick view of the cubane core of 2 and
(b) ball and stick view of the cubane core of 3. Hydrogen
atoms are removed for clarity. Blue, N; red, O; black, C; and cyan,
Zn.
(a) Asymmetric
unit of 2 and (b) ball and stick view
of the molecular structure of 2. Hydrogen atoms are removed
for clarity. Blue, N; red, O; black, C; and cyan, Zn.
Structure of 3
3 crystallizes
in the triclinic P-1 space group. The molecular structure of 3 (Figure ) contains four Zn(II) ions, four tridentate Schiff-base ligands
(L2), and two water molecules that form a distorted cubane core (Figure b). In the core, Zn1 is hexacoordinated and present in a distorted
octahedral environment with three μ3-oxo bridging
oxygens (O2 O3 O4), one alcoholic oxygen (O1), one nitrogen (N1) from
the Schiff-base ligand, and one terminal oxygen (O6) water molecule.
Zn3 also has the same hexacoordination distorted octahedrally with
three μ3-oxo bridging oxygens (O2 O4 O5), one alcoholic
oxygen (O12), one nitrogen (N3) from the Schiff-base ligand, and terminal
oxygen (O11) water molecule. Zn2 is pentacoordinated and present in
a distorted square-pyramidal geometry with three μ3-oxo bridging oxygens (O2 O3 O5), one nitrogen (N2), and one phenolic
oxygen (O7). Zn4 hexacoordination is found in a distorted octahedral
geometry where zinc atom is surrounded by three μ3-oxo bridging oxygens (O3 O4 O5), one nitrogen(N4), one phenolic
oxygen (O9), and one methoxy (O14) oxygen. Based on Harris notation,
the coordination modes found in the Schiff base fall under these three
different coordination modes: [3.3111], [3.3110], [3.3110]. The molecule
is dicationic, and the charge is balanced by the two perchlorate ions
present in the crystal structure, confirmed by the characteristic
IR peak at 1058 cm–1. The selected bond lengths,
bond angles, and packing diagram are given in the Supporting Information
(Tables S10 and S11 and Figure S43, respectively).
Figure 6
Ball and
stick view of the molecular structure of 3. Hydrogen
atoms and counter anions are removed for clarity. Blue,
N; red, O; black, C; brown, H; and cyan, Zn.
Ball and
stick view of the molecular structure of 3. Hydrogen
atoms and counter anions are removed for clarity. Blue,
N; red, O; black, C; brown, H; and cyan, Zn.(a) Ball
and stick view of the cubane core of 2 and
(b) ball and stick view of the cubane core of 3. Hydrogen
atoms are removed for clarity. Blue, N; red, O; black, C; and cyan,
Zn.
Structure of 4
4 crystallizes
in the triclinic P-1 space group. The molecular structure of 4 (Figure a) contains four Zn(II) ions, two Schiff-base ligands (L3), and four
DBM molecules in a distorted cubane core. Zn2 and Zn3 are pentacoordinated
with three μ3-oxo bridging oxygens (O4 O7 O8) and
(O3 O4 O8) and two DBM oxygens (O5 O6) and (O11 O12), respectively,
in a distorted square-pyramidal geometry. Zn1 and Zn4 are hexacoordinated
with three μ3-oxo bridging oxygens (O3 O4 O7) and
(O3 O7 O8), one nitrogen (N1 and N2), and two DBM oxygens (O1 O2)
and (O9 O10), respectively, and present in a distorted octahedral
geometry. In the crystal structure, the two Schiff bases are present
in a [4.331] binding mode. In the IR spectrum, the characteristic
Schiff-base azomethine peak of compound 4 appears at 1645 and 1594
cm–1. The bond angles, bond lengths, and packing
diagram are given in the Supporting Information (Tables S12 and S13 and Figure S44, respectively).
Figure 8
(a) Ball and
stick view of the molecular structure of 4. (b) Cubane
core of 4. Hydrogen atoms are removed for
clarity. Blue, N; red, O; black, C; and cyan, Zn.
(a) Ball and
stick view of the molecular structure of 4. (b) Cubane
core of 4. Hydrogen atoms are removed for
clarity. Blue, N; red, O; black, C; and cyan, Zn.
Structure of 5
5 crystallizes
in the monoclinic P 21/c space group. The asymmetric crystallographic
unit contains two zinc (II) ions, two dianionic Schiff-base ligands
(L4), and one ethanolamine molecule (Figure a). The Zn(II)–O complex adopts a
ladderlike core (Figure c). In the ladderlike core, Zn1 is present in a six-coordinated distorted
octahedral geometry with one μ3-oxo bridging oxygen
(O6), one μ2-oxo bridging oxygen (O4), one phenolic
oxygen (O1), one methoxy oxygen (O2), and one nitrogen (N1). Zn2 is
pentacoordinated and found in a distorted square-pyramidal geometry
with two μ3-oxo bridging oxygens (O6 O6*), one μ2-oxo bridging oxygen (O4), and two nitrogens (N2, N3) as the
binding sites. The binding modes of the Schiff base present are in
a [1.1110] and [2.2110] fashion. The two bridging ethanolamine moieties
stabilize the ladderlike core with a [3.31] binding mode. The whole
moiety is dicationic in charge, balanced by the presence of two perchlorate
ions characterized crystallographically and from the IR characteristic
peak at 1054 cm–1. The peak in the 3386–3310
cm–1 range corresponds to two primary amines, and
that at 3517 cm–1 to the unprotonated alcoholic
peak of the Schiff-base ligand. Distinct azomethine peaks appear at
1627 and 1599 cm–1. The bond lengths, bond angles,
and packing diagram are given in the Supporting Information (Tables S14 and S15 and Figure S45, respectively).
Figure 9
(a) Ball
and stick view of the asymmetric unit of 5. (b) Ball
and stick view of 5. (c) Cubane core of 5. Hydrogen atoms and counter anions are removed for clarity.
Blue, N; red, O; black, C; brown, H; and cyan, Zn.
(a) Ball
and stick view of the asymmetric unit of 5. (b) Ball
and stick view of 5. (c) Cubane core of 5. Hydrogen atoms and counter anions are removed for clarity.
Blue, N; red, O; black, C; brown, H; and cyan, Zn.To summarize, using different methylene chain lengths and
in situ
generated modified Schiff-base ligands with or without co-ligands,
mononuclear zinc Schiff-base complex, cubane, and ladderlike core
structures were synthesized and characterized using single-crystal
X-ray diffraction.In zinc-based cluster chemistry, ligand-designed
variation in nuclearity
and shape of the clusters obtained has not been reported in the literature
to date. Herein, by gradually varying the chain lengths of the modified
Schiff base used, we have synthesized and structurally characterized
clusters of varying sizes and geometry. Though co-ligands have been
employed in (1, 2, 4, and 5) some cases, they have been found to bind to a single metal
ion to saturate its coordination sphere, except for 5, where excess MEA anion stabilizes the tetranuclear core. Therefore,
by varying the chain length of the Schiff bases and using co-ligands,
we have added synthetically interesting molecular clusters exhibiting
cube and ladder-shaped architecture to the literature.
Conclusions
Using varying chain lengths containing Schiff-base ligands and
auxiliary ligands, mononuclear Zn to tetranuclear Zn4 cubane
complexes, a Zn4 ladderlike core has been synthesized and
characterized. The UV absorption and fluorescence properties of the
DBM and non-DBM-containing Schiff-base complexes reveal that the UV-absorbing
property of DBM is responsible for the blue-shifted absorption maxima
compared to the Schiff base containing complex that does not contain
DBM. DFT study (for 1) shows that the LUMO mostly lies
on the UV-absorbing DBM moiety, and in the case of 3,
LUMO is redistributed upon the Schiff-base ligands. The absorption
maxima of the absorption spectra correspond to the π →
π ILCT transition.
Experimental
Section
Instrumentation
Infrared spectra were recorded using
a Nicolet iS5 FTIR spectrometer. Elemental analysis was performed
using a Flash EA Series 1112 CHNS analyzer. TGA was recorded using
a PerkinElmer STA 8000 thermogravimetric analyzer under a nitrogen
gas flow rate of 20 mL/min and a heating rate of 10 °C/min. UV–visible
spectra were recorded using a Jasco V-750 spectrophotometer, and emission
spectra were obtained using a Jasco FP-8500 spectrofluorometer. Single-crystal
X-ray data for 1, 4, and 5 were collected
at 298, 100, 299 K using a Bruker APEX-II CCD diffractometer system
[λ (Mo Kα) = 0.71073Å] with a graphite monochromator.
The data were reduced using APEX-2, the structures were solved using
SHELXS-97 and Olex2, and the data were refined using the program SHELXL-2018/3.[27] The SCXRD data for 2 and 3 were collected at 104 and 100 K with an XtaLAB Synergy,
Single source at offset/far, HyPix3000 diffractometer and a Rigaku
Oxford HyPix3000 CCD plate detector system [λ (Mo Kα)
= 0.71073Å] with a mirror monochromator. Using Olex2,[28] the structure was solved with the ShelXT[29] structure solution program using Intrinsic Phasing
and refined with the SHELXL-2018/3[27] refinement
package using least-squares minimization. All nonhydrogen atoms were
refined anisotropically, and hydrogen atoms were fixed at calculated
positions and refined as a riding model. Graphics of the crystal structures
have been performed with Diamond (version 2.1e) and Mercury (version
3.10.3) software. In the crystal structures of 2, 3,
and 4 solvent molecules, voids are present. The present
solvent molecules are not structurally determined except in 3 (two dichloromethane molecules). Therefore, for 2 and 4, electron densities containing voids were masked
out using the Olex2 solvent mask (similar to PLATON/SQUEEZE). The
voids for 2 and 4 correspond to 1CHCl3 and 1.5CH2Cl2, 0.5H2O, respectively.
The details of the solvent masks used are appended to the corresponding CIF Files and Supporting Information.
Theoretical
Details
Quantum chemical calculations were
performed to investigate the experimental outcomes of the Zn(II)–Schiff
base complexes. Optimization of the gas-phase ground-electronic-state
molecular structure of these complexes was accomplished using the
B3LYP theoretical model without considering any symmetry restriction.
For optimization in the solvent phase, we considered the Integral
Equation Formalism Polarizable Continuum Model (IEFPCM)[30] of DMSO solvent. All of these calculations were
executed at the level of density functional theory using a 6-311G
basis set[31] for all kinds of atoms. A time-dependent-density
function theory (TD-DFT) simulation was performed in the same solvent
phase to obtain an elaborate justification of UV–vis spectra.
The Gaussian 09W package[32] was used for
these calculations.
Preparation of the Schiff-Base Ligand and
Complex
Chemicals, Solvents, and Starting Materials
Caution! All perchlorates, including raw materials and products, are potentially
explosive. These materials should be used during the process in a
fume hood and handled with care.High-purity o-vanillin (Sigma-Aldrich), salicylaldehyde (Merck), ethanolamine
(Avra), 3-aminopropanol (Avra), dibenzoyl methane (DBM) (Sigma-Aldrich),
zinc perchlorate hexahydrate (Sigma-Aldrich), and all other solvents
were purchased from commercial sources. All solvents were distilled
before use, and chemicals were used without further purification.
General Synthesis
Schiff-base ligands L1, L2, L3, and
L4 were synthesized via in situ condensation[1] into the reaction medium.
Synthesis of Complexes
For 1, 3, 4, and 5, similar
synthesis procedures
were followed. Ligands and co-ligands were taken in 30 mL of methanol–acetonitrile
solvent mixture (1:1) and metal salt (zinc perchlorate hexahydrate)
was added followed by the dropwise addition of triethylamine base
and stirred for 6 h, and different crystallization techniques were
performed. Only 2 was stirred for 24 h.For 1, salicylaldehyde (0.082 g, 0.770 mmol), monoethanolamine
(0.082 mL, 0.770 mmol), DBM (0.172 g, 0.770 mmol), zinc perchlorate
(0.286 g, 0.770 mmol), and triethylamine (0.321 mL, 2.31 mmol) were
required. After 6 h of a room-temperature reaction, the yellowish
solution was filtered and the volume was reduced to 10 mL. Yellowish
crystals were obtained overnight and collected and analyzed. Yield:
0.310 g, 89.15% (based on Zn(ClO4)2, 6H2O). Anal. calcd. (%) for C24H21NO4Zn(452.83): C, 63.66; H, 4.67; N, 3.09. Found: C, 63.63; H,
4.71; N, 3.12. 1H NMR (500 MHz, DMSO-d6): δ = 8.39 (s, 1H, CH=N), 8.04–8.06
(m, 4H, Ar H), 7.47–7.54 (m, 6H, Ar H), 7.15–7.25 (m,
2H, Ar H), 6.78 (s, 1H, CH), 6.59–6.61 (d, 1H, Ar H), 6.43–6.54
(m, 1H, Ar H), 5.07 (br,1H, CH2OH), 3.57–3.72 (m,
4H,) 13C NMR (125 MHz, DMSO-d6): δ = 185.96, 172.54, 170.59, 140.65, 136.48, 134.64, 131.46,
128.82, 127.62, 122.76, 118.79, 113.97, 92.79, 62.43, 60.43 (selected
IR bands: ṽ (cm–1) = 3205, 1591, 1519, 1233,
1065, 744).For 2, o-vanillin
(0.117 g, 0.770
mmol), 3-aminopropanol (0.058 mL, 0.770 mmol), DBM (0.172 g, 0.770
mmol), zinc perchlorate (0.286 g, 0.770 mmol), and triethylamine (0.321
mL, 2.31 mmol) were required. Within 30 min, a white precipitate began
to be thrown out from the reaction medium. Stirring was continued
for 24 h for complete precipitation. The precipitate was filtered
and crystallized in chloroform/hexane using the diffusion method.
X-ray quality crystals were obtained in a week’s time. Yield:
0.240 g, 74.05% (based on Zn(ClO4)2, 6H2O). Anal. calcd. (%) for C83H71Cl3N2O14Zn4 (1688.24): C, 59.05;
H, 4.24; N, 1.66. Found: C, 59.09; H, 4.32; N, 1.68. 1H
NMR (500 MHz, DMSO-d6): δ = 8.23
(s, 2H, CH=N), 8.05–8.06 (m, Ar H), 7.47–7.54
(m, 24H, Ar H), 6.78 (s, 4H, C=CH), 6.75–6.81 (d, 4H,
Ar H), 6.36–6.39 (t, 2H, Ar H), 3.83–4.33 (m, 8H, CH2O CH2N), 3.69 (s, 6H, OMe), 1.83 (m, 4H, CH2) 13C NMR (125 MHz, DMSO-d6): δ = 186.03, 172.56, 140.68, 131.43, 128.79, 127.60,
92.79, 56.12 (selected IR bands: ṽ (cm–1)
= 1596, 1452, 1222, 1066, 717).For 3, o-vanillin (0.117 g, 0.770
mmol), 3-aminopropanol (0.058 mL, 0.770 mmol), zinc perchlorate (0.286
g, 0.770 mmol), and triethylamine (0.321 mL, 2.31 mmol) were required.
Stirring was continued for 6 h for completion of the reaction. The
solvent was evaporated with rotor-vapor and crystallized in a DCM/hexane
mixture using the diffusion method. X-ray quality crystals were obtained
in 2 weeks. Yield: 0.190 g, 66.10% (based on Zn(ClO4)2, 6H2O). Anal. calcd. (%) for C46H62Cl6N4O22Zn4 (1497.17):
C, 36.90; H, 4.17; N, 3.74. Found: C, 36.82; H, 4.21; N, 3.70. 1H NMR (500 MHz, DMSO-d6): δ
= 8.24 (s, 4H, CH=N), 6.75–6.86 (m, 8H, Ar H), 6.37–6.43
(m, 4H, Ar H), 3.69 (s, 12H, OMe), 3.46–3.61 (m, 16H, NCH2 and OCH2), 1.78 (m, 8H, CH2) 13C NMR (125 MHz, DMSO-d6): δ = 168.60,
161.39, 152.56, 152.28, 127.55, 126.71, 118.31, 118.11, 113.74, 112.22,
69.14, 62.73, 55.98, 55.72, 55.38, 36.39, 33.21 (selected IR bands:
ṽ (cm–1) = 3483, 1614, 1442, 1211, 1058,
733, 1058).For 4, salicylaldehyde (0.082 g, 0.770
mmol), 3-aminopropanol
(0.058 mL, 0.770 mmol), DBM (0.172 g, 0.770 mmol), zinc perchlorate
(0.286 g, 0.770 mmol), and triethylamine (0.321 mL, 2.31 mmol) were
required. After 6 h of stirring, the reaction mixture was filtered,
evaporated with rotor-vapor, and crystallized in a DCM/hexane layer
method at 0 °C. X-ray quality crystals were obtained within 2
weeks. Yield: 0.200 g, 66.33% (based on Zn(ClO4)2, 6H2O). Anal. calcd. (%) for C81.50H70Cl3N2O12.50Zn4 (1645.22):
C, 59.50; H, 4.29; N, 1.70. Found: C, 59.61; H, 4.53; N, 1.68.1H NMR (500 MHz, DMSO-d6): δ
= 8.24 (s, 2H, CH=N), 8.04–8.05 (m, 16H, Ar H), 7.46–7.53
(m, 24H, Ar H), 7.13–7.17 (m,4H, Ar H), 6.78 (s, 4H, C–H),
6.57–6.61 (m, 2H, Ar H), 6.45–6.48 (m, 2H, Ar H), 3.61–3.74
(m, 4H, CH2N), 3.36–3.44 (m, 4H, CH2O),
1.67–1.69 (m, 4H, CH2), 13C NMR (125
MHz, DMSO-d6): δ = 186.03, 172.56,
170.73, 140.67, 136.57, 135.95, 134.88, 133.76, 131.44, 128.80, 127.60,
122.70, 114.29, 113.02, 92.80, 59.09, 58.07, 57.53, 55.35, 34.66,
33.90, (selected IR bands: ṽ (cm–1) = 1594,
1474, 1272, 1065, 716).For 5, o-vanillin (0.117 g, 0.770
mmol), ethanolamine (0.069 mL, 1.155 mmol), zinc perchlorate (0.286
g, 0.770 mmol), and triethylamine (0.321 mL, 2.31 mmol) were required.
Stirring was continued for 6 h. The clear solution was filtered and
evaporated. The oily residue was dissolved in DCM and crystallized
in a DCM/hexane layer method at 0 °C. X-ray quality crystals
were obtained within 1 week. Yield: 0.210 g, 80.58% (based on Zn(ClO4)2, 6H2O). Anal. calcd. (%) for C44H60Cl2N6O22Zn4 (1357.36): C, 38.93; H, 4.46; N, 6.19. Found: C, 38.87; H,
4.53; N, 6.23. 1H NMR (500 MHz, DMSO-d6): δ = 8.57(s, 2H, CH=N), 8.37 (s, 2H, CH=N),
6.84–6.87 (m, 8H, Ar H), 6.42–6.46 (m, 4H, Ar H), 5.64
(br, 4H, NH2), 3.68 (s, 12H, OMe), 3.62 (m, 8H, CH2N), 3.50 (m, 8H, CH2O), 2.74 (m, 4H, CH2N), 2.51–2.55 (m, 4H, CH2O), 13C NMR
(125 MHz, DMSO-d6): δ = 172.48,
171.39, 164.80, 162.95, 161.76, 127.92, 127.63, 118.18, 118.00, 115.49,
114.94, 113.58, 112.86, 112.64, 64.35, 62.25, 60.44, 60.13, 59.70,
58.63, 56.57, 56.07, 55.95, 55.38, 49.07, 44.99, 42.81 (selected IR
bands: ṽ (cm–1) = 3538, 1627, 1449, 1212,
1054, 740).
Authors: Kseniya G Vladimirova; Alexandra Ya Freidzon; Oxana V Kotova; Andrei A Vaschenko; Leonid S Lepnev; Alexander A Bagatur'yants; Alexei G Vitukhnovskiy; Nickolai F Stepanov; Michael V Alfimov Journal: Inorg Chem Date: 2009-12-07 Impact factor: 5.165
Authors: Heui Beom Lee; David A Marchiori; Ruchira Chatterjee; Paul H Oyala; Junko Yano; R David Britt; Theodor Agapie Journal: J Am Chem Soc Date: 2020-02-18 Impact factor: 15.419
Authors: Luc J Bourhis; Oleg V Dolomanov; Richard J Gildea; Judith A K Howard; Horst Puschmann Journal: Acta Crystallogr A Found Adv Date: 2015-01-01 Impact factor: 2.290