Literature DB >> 35035625

Unsupervised analysis of COVID-19 pandemic evolution in brazilian states.

Victor Cassão1, Domingos Alves2, Ana Clara de Andrade Mioto3, Filipe Andrade Bernardi3, Newton Shydeo Brandão Miyoshi1.   

Abstract

Extracting information and discovering patterns from a massive dataset is a hard task. In an epidemic scenario, this data has to be integrated providing organization, agility, transparency and, above all, it has to be free of any type of censorship or bias. The aim of this paper is to analyze how coronavirus contamination has evolved in Brazil applying unsupervised analysis algorithms to extract information and find characteristics between them. To achieve this goal we describe an implementation that uses data about Covid-19 spread in Brazilian states (26 states and the federal district), applying a Time Series Clustering technique based on a K-Means variation, using Dynamic Time Warping as a similarity metric. We used data reported by the Ministry of Health in Brazil, referring to deaths per 100k inhabitants, during 452 days from the first reported death in each state. Two analyzes were performed, one considering 3 clusters and the other with 6 clusters. Through these analysis, 3 patterns of responses to the pandemic can be observed, ranging from one of greater to lesser control of the pandemic, although in recent months all clusters showed a highly increase in the number of deaths. The identification of these patterns is important to highlight possible actions and events, as well as other characteristics that determine the correct or incorrect public decision-making in combating the Covid-19 pandemic.
© 2021 The Author(s). Published by Elsevier B.V.

Entities:  

Keywords:  Covid-19; Dynamic Time Warping; Time Series Clustering; Unsupervised Analysis

Year:  2022        PMID: 35035625      PMCID: PMC8745937          DOI: 10.1016/j.procs.2021.12.061

Source DB:  PubMed          Journal:  Procedia Comput Sci


  2 in total

1.  Clustering analysis of countries using the COVID-19 cases dataset.

Authors:  Vasilios Zarikas; Stavros G Poulopoulos; Zoe Gareiou; Efthimios Zervas
Journal:  Data Brief       Date:  2020-05-29

2.  Evolution and epidemic spread of SARS-CoV-2 in Brazil.

Authors:  Darlan S Candido; Ingra M Claro; Jaqueline G de Jesus; William M Souza; Filipe R R Moreira; Simon Dellicour; Thomas A Mellan; Louis du Plessis; Rafael H M Pereira; Flavia C S Sales; Erika R Manuli; Julien Thézé; Luiz Almeida; Mariane T Menezes; Carolina M Voloch; Marcilio J Fumagalli; Thaís M Coletti; Camila A M da Silva; Mariana S Ramundo; Mariene R Amorim; Henrique H Hoeltgebaum; Swapnil Mishra; Mandev S Gill; Luiz M Carvalho; Lewis F Buss; Carlos A Prete; Jordan Ashworth; Helder I Nakaya; Pedro S Peixoto; Oliver J Brady; Samuel M Nicholls; Amilcar Tanuri; Átila D Rossi; Carlos K V Braga; Alexandra L Gerber; Ana Paula de C Guimarães; Nelson Gaburo; Cecila Salete Alencar; Alessandro C S Ferreira; Cristiano X Lima; José Eduardo Levi; Celso Granato; Giulia M Ferreira; Ronaldo S Francisco; Fabiana Granja; Marcia T Garcia; Maria Luiza Moretti; Mauricio W Perroud; Terezinha M P P Castiñeiras; Carolina S Lazari; Sarah C Hill; Andreza Aruska de Souza Santos; Camila L Simeoni; Julia Forato; Andrei C Sposito; Angelica Z Schreiber; Magnun N N Santos; Camila Zolini de Sá; Renan P Souza; Luciana C Resende-Moreira; Mauro M Teixeira; Josy Hubner; Patricia A F Leme; Rennan G Moreira; Maurício L Nogueira; Neil M Ferguson; Silvia F Costa; José Luiz Proenca-Modena; Ana Tereza R Vasconcelos; Samir Bhatt; Philippe Lemey; Chieh-Hsi Wu; Andrew Rambaut; Nick J Loman; Renato S Aguiar; Oliver G Pybus; Ester C Sabino; Nuno Rodrigues Faria
Journal:  Science       Date:  2020-07-23       Impact factor: 47.728

  2 in total

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