Literature DB >> 35025860

Machine learning and deep learning techniques to support clinical diagnosis of arboviral diseases: A systematic review.

Sebastião Rogério da Silva Neto1, Thomás Tabosa Oliveira1, Igor Vitor Teixeira1, Samuel Benjamin Aguiar de Oliveira2,3, Vanderson Souza Sampaio2,3, Theo Lynn4, Patricia Takako Endo1.   

Abstract

BACKGROUND: Neglected tropical diseases (NTDs) primarily affect the poorest populations, often living in remote, rural areas, urban slums or conflict zones. Arboviruses are a significant NTD category spread by mosquitoes. Dengue, Chikungunya, and Zika are three arboviruses that affect a large proportion of the population in Latin and South America. The clinical diagnosis of these arboviral diseases is a difficult task due to the concurrent circulation of several arboviruses which present similar symptoms, inaccurate serologic tests resulting from cross-reaction and co-infection with other arboviruses.
OBJECTIVE: The goal of this paper is to present evidence on the state of the art of studies investigating the automatic classification of arboviral diseases to support clinical diagnosis based on Machine Learning (ML) and Deep Learning (DL) models.
METHOD: We carried out a Systematic Literature Review (SLR) in which Google Scholar was searched to identify key papers on the topic. From an initial 963 records (956 from string-based search and seven from a single backward snowballing procedure), only 15 relevant papers were identified.
RESULTS: Results show that current research is focused on the binary classification of Dengue, primarily using tree-based ML algorithms. Only one paper was identified using DL. Five papers presented solutions for multi-class problems, covering Dengue (and its variants) and Chikungunya. No papers were identified that investigated models to differentiate between Dengue, Chikungunya, and Zika.
CONCLUSIONS: The use of an efficient clinical decision support system for arboviral diseases can improve the quality of the entire clinical process, thus increasing the accuracy of the diagnosis and the associated treatment. It should help physicians in their decision-making process and, consequently, improve the use of resources and the patient's quality of life.

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Year:  2022        PMID: 35025860      PMCID: PMC8791518          DOI: 10.1371/journal.pntd.0010061

Source DB:  PubMed          Journal:  PLoS Negl Trop Dis        ISSN: 1935-2727


  46 in total

1.  Morbidity and impaired quality of life 30 months after chikungunya infection: comparative cohort of infected and uninfected French military policemen in Reunion Island.

Authors:  Catherine Marimoutou; Elodie Vivier; Manuela Oliver; Jean-Paul Boutin; Fabrice Simon
Journal:  Medicine (Baltimore)       Date:  2012-07       Impact factor: 1.889

2.  A Comparison between Decision Tree and Random Forest in Determining the Risk Factors Associated with Type 2 Diabetes.

Authors:  Habibollah Esmaily; Maryam Tayefi; Hassan Doosti; Majid Ghayour-Mobarhan; Hossein Nezami; Alireza Amirabadizadeh
Journal:  J Res Health Sci       Date:  2018-04-24

3.  Clinical Update on Dengue, Chikungunya, and Zika: What We Know at the Time of Article Submission.

Authors:  Liang E Liu; Meaghan Dehning; Ashley Phipps; Ray E Swienton; Curtis A Harris; Kelly R Klein
Journal:  Disaster Med Public Health Prep       Date:  2016-08-30       Impact factor: 1.385

4.  Current Zika virus epidemiology and recent epidemics.

Authors:  S Ioos; H-P Mallet; I Leparc Goffart; V Gauthier; T Cardoso; M Herida
Journal:  Med Mal Infect       Date:  2014-07-04       Impact factor: 2.152

5.  Clinical applications of machine learning algorithms: beyond the black box.

Authors:  David S Watson; Jenny Krutzinna; Ian N Bruce; Christopher Em Griffiths; Iain B McInnes; Michael R Barnes; Luciano Floridi
Journal:  BMJ       Date:  2019-03-12

6.  First report of autochthonous transmission of Zika virus in Brazil.

Authors:  Camila Zanluca; Vanessa Campos Andrade de Melo; Ana Luiza Pamplona Mosimann; Glauco Igor Viana Dos Santos; Claudia Nunes Duarte Dos Santos; Kleber Luz
Journal:  Mem Inst Oswaldo Cruz       Date:  2015-06-09       Impact factor: 2.743

7.  Events preceding death among chikungunya virus infected patients: a systematic review.

Authors:  José Cerbino-Neto; Emersom Cicilini Mesquita; Rodrigo Teixeira Amancio; Pedro Emmanuel Alvarenga Americano do Brasil
Journal:  Rev Soc Bras Med Trop       Date:  2020-05-11       Impact factor: 1.581

8.  Co-infection of Dengue, Zika and Chikungunya in a group of pregnant women from Tuxtla Gutiérrez, Chiapas: Preliminary data. 2019.

Authors:  Leticia Eligio-García; María Del Pilar Crisóstomo-Vázquez; María de Lourdes Caballero-García; Mariana Soria-Guerrero; Jorge Fernando Méndez-Galván; Sury Antonio López-Cancino; Enedina Jiménez-Cardoso
Journal:  PLoS Negl Trop Dis       Date:  2020-12-21

9.  Opportunities and challenges in developing deep learning models using electronic health records data: a systematic review.

Authors:  Cao Xiao; Edward Choi; Jimeng Sun
Journal:  J Am Med Inform Assoc       Date:  2018-10-01       Impact factor: 4.497

10.  Arboviruses: A global public health threat.

Authors:  Marc Girard; Christopher B Nelson; Valentina Picot; Duane J Gubler
Journal:  Vaccine       Date:  2020-04-24       Impact factor: 3.641

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