| Literature DB >> 35023809 |
Ida Kollerup1, Anne Kathrine Aagaard Thomsen1, Jette Brommann Kornum2, Kirsten Inger Paulsen2, Lars Bjerrum3, Malene Plejdrup Hansen1.
Abstract
Objective: To describe the use and quality of point-of-care (POC) microscopy, urine culture and susceptibility testing performed in general practice in Northern Denmark from 2013 to 2018.Design: Descriptive studySetting: General practices receiving a fee for examining urine samples.Subjects: Simulated urine samples containing uropathogenic bacteria distributed by the organisation for improvement of microbiological quality (MIKAP).Main outcome measures: Percentage of use and correct answers for microscopy, culture and susceptibility testing.Entities:
Keywords: Urinary tract infections; microscopy; culture media; point-of-care testing; general practice; microbiological diagnosis
Mesh:
Substances:
Year: 2022 PMID: 35023809 PMCID: PMC9090341 DOI: 10.1080/02813432.2021.2022349
Source DB: PubMed Journal: Scand J Prim Health Care ISSN: 0281-3432 Impact factor: 3.147
Figure 1.Attrition flow chart of urinalysis performed by use of microcopy, urine culture and susceptibility testing in general practice during 2013–2018.
Percentages of correct answers for microscopy.
| Microscopy ( | Correct answers (%) (95% CI) |
|---|---|
| 66.8 (60.3–72.9) | |
| 64.1 (58.8–69.2) | |
| 72.3 (63.1–80.4) | |
| 57.0 (50.2–63.5) | |
| 30.7 (22.4–40.0) | |
| 78.3 (75.7–80.8) |
The total number of answers (n) and percentage of correct answers (95% confidence interval) are shown for each bacterial strain. All years are combined for each bacterial strain.
aAll samples including E. coli are combined in E. coli (all strains).
Percentages of correct answers for susceptibility testing.
| Susceptibility testing ( | Correct answers (%) (95% CI) |
|---|---|
| 75.8 (71.6–79.6) | |
| 74.0 (70.5–77.3) | |
| 67.1 (60.5–73.3) | |
| 69.2 (64.6–73.4) | |
| 79.9 (73.8–85.1) | |
| 89.8 (86.6–92.4) | |
| 84.3 (80.5–87.5) | |
| 79.0 (73.3–84.0) | |
| 90.7 (87.7–93.2) | |
| 84.8 (79.4–89.3) | |
| 89.8 (85.2–93.4) |
The total number of answers (n) and percentage of correct answers (95% confidence interval) are shown for each bacterial strain. All years are combined for each bacterial strain.
Res: resistant; Nitro: nitrofurantoin; Ampi: ampicillin; Meci: mecilinam; Sulfa: sulfamethizole; Trim: trimethoprim; Cipro: ciprofloxacin.
Percentages of correct answers for urine culture and susceptibility testing methods.
| Type of urine culture method ( | Correct answers % (95% CI) |
|---|---|
| Flexicult SSI urinary kit™ (987) | 87.6 (85.4–89.6) |
| Chromogenic agar (1020) | 85.1 (82.8–87.2) |
| 2-plate dipslide (427) | 85.2 (81.5–88.5) |
| 3-plate dipslide (203) | 72.9 (66.2–78.9) |
| Others (206) | 75.2 (68.8–81.0) |
|
|
|
| Flexicult SSI urinary kit™ (1109) | 77.2 (74.6–79.6) |
| Mueller Hinton agar with tablets (1918) | 84.6 (82.9–86.2) |
| Mueller Hinton agar with discs (371) | 75.5 (70.8–79.8) |
| Iso-Sensitest with tablets (117) | 76.1 (67.3–83.5) |
| Iso-Sensitest with discs (188) | 72.9 (65.9–79.1) |
| Others (351) | 76.6 (71.9–81.0) |
The total number of answers (n) and percentage of correct answers (95% confidence interval) are shown for each method. All years and bacterial strains are combined for each method.
Percentages of correct answers for urine culture.
| Urine culture ( | Correct answers (%) (95% CI) |
|---|---|
| 88.2 (84.2–91.5) | |
| 87.7 (84.4–90.5) | |
| 78.4 (70.9–84.7) | |
| 72.9 (67.7–77.7) | |
| 77.5 (70.2–83.7) | |
| 87.0 (85.2–88.7) |
The total number of answers (n) and percentage of correct answers (95% confidence interval) are shown for each bacterial strain. All years are combined for each bacterial strain.
aAll samples including E. coli are combined in E. coli (all strains).
| Type of urine culture method (n) | Correct answers (%) |
|---|---|
| Flexicult SSI urinary kit™ (113) | 95.6 |
| Chromogenic agar (114) | 86.8 |
| 2-plate dipslide (50) | 88.0 |
| 3-plate dipslide (23) | 82.6 |
| Others (22) | 54.5 |
| Flexicult SSI urinary kit™ (168) | 95.8 |
| Chromogenic agar (173) | 91.3 |
| 2-plate dipslide (68) | 76.5 |
| 3-plate dipslide (38) | 63.2 |
| Others (33) | 72.7 |
| Flexicult SSI urinary kit™ (49) | 79.6 |
| Chromogenic agar (52) | 69.2 |
| 2-plate dipslide (22) | 95.5 |
| 3-plate dipslide (9) | 88.9 |
| Others (16) | 75.0 |
| Flexicult SSI urinary kit™ (119) | 67.2 |
| Chromogenic agar (116) | 76.2 |
| 2-plate dipslide (43) | 83.7 |
| 3-plate dipslide (19) | 63.2 |
| Others (24) | 58.3 |
| Flexicult SSI urinary kit™ (64) | 70.3 |
| Chromogenic agar (54) | 77.8 |
| 2-plate dipslide (22) | 90.9 |
| 3-plate dipslide (9) | 88.9 |
| Others (11) | 72.7 |
| Flexicult SSI urinary kit™ (474) | 91.6 |
| Chromogenic agar (511) | 85.9 |
| 2-plate dipslide (222) | 84.6 |
| 3-plate dipslide (105) | 73.4 |
| Others (100) | 80.9 |
The total number of answers (n) and percentage of correct answers are shown for each method. All years are combined for each method.
aAll samples including E. coli are combined in E. coli (all strains).
| Type of susceptibility testing method (n) | Correct answers (%) |
|---|---|
| Flexicult SSI urinary kit™ (122) | 91.0 |
| Mueller Hinton agar with tablets (224) | 78.1 |
| Mueller Hinton agar with discs (44) | 59.1 |
| Iso-Sensitest with tablets (13) | 53.8 |
| Iso-Sensitest with discs (27) | 33.3 |
| Others (24) | 66.7 |
| Flexicult SSI urinary kit™ (197) | 69.0 |
| Mueller Hinton agar with tablets (299) | 76.3 |
| Mueller Hinton agar with discs (63) | 81.0 |
| Iso-Sensitest with tablets (16) | 81.3 |
| Iso-Sensitest with discs (34) | 70.6 |
| Others (56) | 73.2 |
| Flexicult SSI urinary kit™ (62) | 82.3 |
| Mueller Hinton agar with tablets (96) | 66.7 |
| Mueller Hinton agar with discs (20) | 65.0 |
| Iso-Sensitest with tablets (8) | 37.5 |
| Iso-Sensitest with discs (8) | 25.0 |
| Others (25) | 56.0 |
| Flexicult SSI urinary kit™ (122) | 73.8 |
| Mueller Hinton agar with tablets (218) | 69.7 |
| Mueller Hinton agar with discs (37) | 64.9 |
| Iso-Sensitest with tablets (15) | 46.7 |
| Iso-Sensitest with discs (8) | 50.0 |
| Others (41) | 68.3 |
| Flexicult SSI urinary kit™ (62) | 74.2 |
| Mueller Hinton agar with tablets (103) | 87.4 |
| Mueller Hinton agar with discs (21) | 61.9 |
| Iso-Sensitest with tablets (2) | 100.0 |
| Iso-Sensitest with discs (6) | 66.7 |
| Others (15) | 80.0 |
| Flexicult SSI urinary kit™ (123) | 87.0 |
| Mueller Hinton agar with tablets (209) | 92.8 |
| Mueller Hinton agar with discs (45) | 86.7 |
| Iso-Sensitest with tablets (13) | 92.3 |
| Iso-Sensitest with discs (31) | 93.5 |
| Others (39) | 79.5 |
| Flexicult SSI urinary kit™ (117) | 70.1 |
| Mueller Hinton agar with tablets (217) | 93.1 |
| Mueller Hinton agar with discs (40) | 80.0 |
| Iso-Sensitest with tablets (10) | 90.0 |
| Iso-Sensitest with discs (15) | 80.0 |
| Others (46) | 82.6 |
| Flexicult SSI urinary kit™ (62) | 56.5 |
| Mueller Hinton agar with tablets (111) | 93.7 |
| Mueller Hinton agar with discs (19) | 68.4 |
| Iso-Sensitest with tablets (9) | 88.9 |
| Iso-Sensitest with discs (15) | 73.3 |
| Others (23) | 73.9 |
| Flexicult SSI urinary kit™ (126) | 81.7 |
| Mueller Hinton agar with tablets (225) | 96.0 |
| Mueller Hinton agar with discs (41) | 87.8 |
| Iso-Sensitest with tablets (16) | 87.5 |
| Iso-Sensitest with discs (23) | 100.0 |
| Others (31) | 90.3 |
| Flexicult SSI urinary kit™ (55) | 81.8 |
| Mueller Hinton agar with tablets (106) | 89.6 |
| Mueller Hinton agar with discs (22) | 68.2 |
| Iso-Sensitest with tablets (6) | 100.0 |
| Iso-Sensitest with discs (7) | 71.4 |
| Others (28) | 85.7 |
| Flexicult SSI urinary kit™ (61) | 82.0 |
| Mueller Hinton agar with tablets (110) | 92.7 |
| Mueller Hinton agar with discs (19) | 94.7 |
| Iso-Sensitest with tablets (9) | 88.9 |
| Iso-Sensitest with discs (14) | 100.0 |
| Others (23) | 87.0 |
The total number of answers (n) and percentage of correct answers are shown for each method. All years are combined for each method.
Res: resistant; Nitro: nitrofurantoin; Ampi: ampicillin; Meci: mecilinam; Sulfa: sulfamethizole; Trim: trimethoprim; Cipro: ciprofloxacin.