Literature DB >> 35016198

Striking antibody evasion manifested by the Omicron variant of SARS-CoV-2.

Lihong Liu1, Sho Iketani1,2, Yicheng Guo1, Jasper F-W Chan3,4, Maple Wang1, Liyuan Liu5, Yang Luo1, Hin Chu3,4, Yiming Huang5, Manoj S Nair1, Jian Yu1, Kenn K-H Chik4, Terrence T-T Yuen3, Chaemin Yoon3, Kelvin K-W To3,4, Honglin Chen3,4, Michael T Yin1,6, Magdalena E Sobieszczyk1,6, Yaoxing Huang1, Harris H Wang5, Zizhang Sheng1, Kwok-Yung Yuen3,4, David D Ho7,8,9.   

Abstract

The B.1.1.529/Omicron variant of SARS-CoV-2 was only recently detected in southern Africa, but its subsequent spread has been extensive, both regionally and globally1. It is expected to become dominant in the coming weeks2, probably due to enhanced transmissibility. A striking feature of this variant is the large number of spike mutations3 that pose a threat to the efficacy of current COVID-19 vaccines and antibody therapies4. This concern is amplified by the findings of our study. Here we found that B.1.1.529 is markedly resistant to neutralization by serum not only from patients who recovered from COVID-19, but also from individuals who were vaccinated with one of the four widely used COVID-19 vaccines. Even serum from individuals who were vaccinated and received a booster dose of mRNA-based vaccines exhibited substantially diminished neutralizing activity against B.1.1.529. By evaluating a panel of monoclonal antibodies against all known epitope clusters on the spike protein, we noted that the activity of 17 out of the 19 antibodies tested were either abolished or impaired, including ones that are currently authorized or approved for use in patients. Moreover, we also identified four new spike mutations (S371L, N440K, G446S and Q493R) that confer greater antibody resistance on B.1.1.529. The Omicron variant presents a serious threat to many existing COVID-19 vaccines and therapies, compelling the development of new interventions that anticipate the evolutionary trajectory of SARS-CoV-2.
© 2021. The Author(s), under exclusive licence to Springer Nature Limited.

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Year:  2021        PMID: 35016198     DOI: 10.1038/s41586-021-04388-0

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  319 in total

1.  Modeling the early embryo.

Authors:  Vivien Marx
Journal:  Nat Methods       Date:  2022-06       Impact factor: 28.547

2.  Boosting immunity to Omicron.

Authors:  Xiaoying Shen
Journal:  Nat Med       Date:  2022-03       Impact factor: 53.440

3.  Molecular basis of receptor binding and antibody neutralization of Omicron.

Authors:  Qin Hong; Wenyu Han; Jiawei Li; Shiqi Xu; Yifan Wang; Cong Xu; Zuyang Li; Yanxing Wang; Chao Zhang; Zhong Huang; Yao Cong
Journal:  Nature       Date:  2022-02-28       Impact factor: 49.962

Review 4.  Molecular adaptations during viral epidemics.

Authors:  Nash D Rochman; Yuri I Wolf; Eugene V Koonin
Journal:  EMBO Rep       Date:  2022-07-18       Impact factor: 9.071

5.  Mapping SARS-CoV-2 antigenic relationships and serological responses.

Authors:  Samuel H Wilks; Barbara Mühlemann; Xiaoying Shen; Sina Türeli; Eric B LeGresley; Antonia Netzl; Miguela A Caniza; Jesus N Chacaltana-Huarcaya; Victor M Corman; Xiaoju Daniell; Michael B Datto; Fatimah S Dawood; Thomas N Denny; Christian Drosten; Ron A M Fouchier; Patricia J Garcia; Peter J Halfmann; Agatha Jassem; Lara M Jeworowski; Terry C Jones; Yoshihiro Kawaoka; Florian Krammer; Charlene McDanal; Rolando Pajon; Viviana Simon; Melissa S Stockwell; Haili Tang; Harm van Bakel; Vic Veguilla; Richard Webby; David C Montefiori; Derek J Smith
Journal:  bioRxiv       Date:  2022-07-13

6.  Durability analysis of the highly effective BNT162b2 vaccine against COVID-19.

Authors:  Arjun Puranik; Patrick J Lenehan; John C O'Horo; Colin Pawlowski; Michiel J M Niesen; Abinash Virk; Melanie D Swift; Walter Kremers; A J Venkatakrishnan; Joel E Gordon; Holly L Geyer; Leigh Lewis Speicher; Venky Soundararajan; Andrew D Badley
Journal:  PNAS Nexus       Date:  2022-06-08

7.  Association of Receipt of the Fourth BNT162b2 Dose With Omicron Infection and COVID-19 Hospitalizations Among Residents of Long-term Care Facilities.

Authors:  Khitam Muhsen; Nimrod Maimon; Amiel Yaron Mizrahi; Boris Boltyansky; Omri Bodenheimer; Zafrira Hillel Diamant; Lea Gaon; Dani Cohen; Ron Dagan
Journal:  JAMA Intern Med       Date:  2022-08-01       Impact factor: 44.409

Review 8.  The humoral response and antibodies against SARS-CoV-2 infection.

Authors:  Hai Qi; Linqi Zhang; Bo Liu; Xinquan Wang
Journal:  Nat Immunol       Date:  2022-06-27       Impact factor: 31.250

9.  Neutralization mechanism of a human antibody with pan-coronavirus reactivity including SARS-CoV-2.

Authors:  Xiaoyu Sun; Chunyan Yi; Yuanfei Zhu; Longfei Ding; Shuai Xia; Xingchen Chen; Mu Liu; Chenjian Gu; Xiao Lu; Yadong Fu; Shuangfeng Chen; Tianlong Zhang; Yaguang Zhang; Zhuo Yang; Liyan Ma; Wangpeng Gu; Gaowei Hu; Shujuan Du; Renhong Yan; Weihui Fu; Songhua Yuan; Chenli Qiu; Chen Zhao; Xiaoyan Zhang; Yonghui He; Aidong Qu; Xu Zhou; Xiuling Li; Gary Wong; Qiang Deng; Qiang Zhou; Hongzhou Lu; Zhiyang Ling; Jianping Ding; Lu Lu; Jianqing Xu; Youhua Xie; Bing Sun
Journal:  Nat Microbiol       Date:  2022-06-30       Impact factor: 30.964

10.  Anti-human ACE2 antibody neutralizes and inhibits virus production of SARS-CoV-2 variants of concern.

Authors:  Abigael E Chaouat; Ilija Brizic; Paola Kucan Brlic; Nofar Atari; Limor Kliker; Or Alfi; Michal Mandelboim; Dana Wolf; Laith Tafish; Inbal Kol; Stipan Jonjic; Ofer Mandelboim
Journal:  iScience       Date:  2022-08-13
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