Literature DB >> 35013580

High-dimensional role of AI and machine learning in cancer research.

Enrico Capobianco1.   

Abstract

The role of Artificial Intelligence and Machine Learning in cancer research offers several advantages, primarily scaling up the information processing and increasing the accuracy of the clinical decision-making. The key enabling tools currently in use in Precision, Digital and Translational Medicine, here named as 'Intelligent Systems' (IS), leverage unprecedented data volumes and aim to model their underlying heterogeneous influences and variables correlated with patients' outcomes. As functionality and performance of IS are associated with complex diagnosis and therapy decisions, a rich spectrum of patterns and features detected in high-dimensional data may be critical for inference purposes. Many challenges are also present in such discovery task. First, the generation of interpretable model results from a mix of structured and unstructured input information. Second, the design, and implementation of automated clinical decision processes for drawing disease trajectories and patient profiles. Ultimately, the clinical impacts depend on the data effectively subjected to steps such as harmonisation, integration, validation, etc. The aim of this work is to discuss the transformative value of IS applied to multimodal data acquired through various interrelated cancer domains (high-throughput genomics, experimental biology, medical image processing, radiomics, patient electronic records, etc.).
© 2022. The Author(s), under exclusive licence to Springer Nature Limited.

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Mesh:

Year:  2022        PMID: 35013580      PMCID: PMC8854697          DOI: 10.1038/s41416-021-01689-z

Source DB:  PubMed          Journal:  Br J Cancer        ISSN: 0007-0920            Impact factor:   9.075


  77 in total

Review 1.  Advancing Drug Discovery via Artificial Intelligence.

Authors:  H C Stephen Chan; Hanbin Shan; Thamani Dahoun; Horst Vogel; Shuguang Yuan
Journal:  Trends Pharmacol Sci       Date:  2019-07-15       Impact factor: 14.819

Review 2.  Using Big Data and Predictive Analytics to Determine Patient Risk in Oncology.

Authors:  Ravi B Parikh; Andrew Gdowski; Debra A Patt; Andrew Hertler; Craig Mermel; Justin E Bekelman
Journal:  Am Soc Clin Oncol Educ Book       Date:  2019-05-17

3.  Using Big Data Analytics to Advance Precision Radiation Oncology.

Authors:  Todd R McNutt; Stanley H Benedict; Daniel A Low; Kevin Moore; Ilya Shpitser; Wei Jiang; Pranav Lakshminarayanan; Zhi Cheng; Peijin Han; Xuan Hui; Minoru Nakatsugawa; Junghoon Lee; Joseph A Moore; Scott P Robertson; Veeraj Shah; Russ Taylor; Harry Quon; John Wong; Theodore DeWeese
Journal:  Int J Radiat Oncol Biol Phys       Date:  2018-03-02       Impact factor: 7.038

4.  Contribution of systemic and somatic factors to clinical response and resistance to PD-L1 blockade in urothelial cancer: An exploratory multi-omic analysis.

Authors:  Alexandra Snyder; Tavi Nathanson; Samuel A Funt; Arun Ahuja; Jacqueline Buros Novik; Matthew D Hellmann; Eliza Chang; Bulent Arman Aksoy; Hikmat Al-Ahmadie; Erik Yusko; Marissa Vignali; Sharon Benzeno; Mariel Boyd; Meredith Moran; Gopa Iyer; Harlan S Robins; Elaine R Mardis; Taha Merghoub; Jeff Hammerbacher; Jonathan E Rosenberg; Dean F Bajorin
Journal:  PLoS Med       Date:  2017-05-26       Impact factor: 11.069

Review 5.  Precision immunoprofiling by image analysis and artificial intelligence.

Authors:  Viktor H Koelzer; Korsuk Sirinukunwattana; Jens Rittscher; Kirsten D Mertz
Journal:  Virchows Arch       Date:  2018-11-23       Impact factor: 4.064

Review 6.  Are innovation and new technologies in precision medicine paving a new era in patients centric care?

Authors:  Attila A Seyhan; Claudio Carini
Journal:  J Transl Med       Date:  2019-04-05       Impact factor: 5.531

Review 7.  Enabling Web-scale data integration in biomedicine through Linked Open Data.

Authors:  Maulik R Kamdar; Javier D Fernández; Axel Polleres; Tania Tudorache; Mark A Musen
Journal:  NPJ Digit Med       Date:  2019-09-10

8.  Network-based approach to prediction and population-based validation of in silico drug repurposing.

Authors:  Feixiong Cheng; Rishi J Desai; Diane E Handy; Ruisheng Wang; Sebastian Schneeweiss; Albert-László Barabási; Joseph Loscalzo
Journal:  Nat Commun       Date:  2018-07-12       Impact factor: 14.919

9.  A multifactorial model of T cell expansion and durable clinical benefit in response to a PD-L1 inhibitor.

Authors:  Mark D M Leiserson; Vasilis Syrgkanis; Amy Gilson; Miroslav Dudik; Sharon Gillett; Jennifer Chayes; Christian Borgs; Dean F Bajorin; Jonathan E Rosenberg; Samuel Funt; Alexandra Snyder; Lester Mackey
Journal:  PLoS One       Date:  2018-12-31       Impact factor: 3.240

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  1 in total

Review 1.  Application of non-negative matrix factorization in oncology: one approach for establishing precision medicine.

Authors:  Ryuji Hamamoto; Ken Takasawa; Hidenori Machino; Kazuma Kobayashi; Satoshi Takahashi; Amina Bolatkan; Norio Shinkai; Akira Sakai; Rina Aoyama; Masayoshi Yamada; Ken Asada; Masaaki Komatsu; Koji Okamoto; Hirokazu Kameoka; Syuzo Kaneko
Journal:  Brief Bioinform       Date:  2022-07-18       Impact factor: 13.994

  1 in total

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