Literature DB >> 35010920

Metaproteomics Approach and Pathway Modulation in Obesity and Diabetes: A Narrative Review.

Francesco Maria Calabrese1, Annalisa Porrelli1, Mirco Vacca1, Blandine Comte2, Katharina Nimptsch3, Mariona Pinart3, Tobias Pischon3,4,5,6,7, Estelle Pujos-Guillot2, Maria De Angelis1.   

Abstract

Low-grade inflammatory diseases revealed metabolic perturbations that have been linked to various phenotypes, including gut microbiota dysbiosis. In the last decade, metaproteomics has been used to investigate protein composition profiles at specific steps and in specific healthy/pathologic conditions. We applied a rigorous protocol that relied on PRISMA guidelines and filtering criteria to obtain an exhaustive study selection that finally resulted in a group of 10 studies, based on metaproteomics and that aim at investigating obesity and diabetes. This batch of studies was used to discuss specific microbial and human metaproteome alterations and metabolic patterns in subjects affected by diabetes (T1D and T2D) and obesity. We provided the main up- and down-regulated protein patterns in the inspected pathologies. Despite the available results, the evident paucity of metaproteomic data is to be considered as a limiting factor in drawing objective considerations. To date, ad hoc prepared metaproteomic databases collecting pathologic data and related metadata, together with standardized analysis protocols, are required to increase our knowledge on these widespread pathologies.

Entities:  

Keywords:  diabetes; gut microbiota; low-grade inflammation; metabolic diseases; metaproteomics; obesity

Mesh:

Substances:

Year:  2021        PMID: 35010920      PMCID: PMC8746330          DOI: 10.3390/nu14010047

Source DB:  PubMed          Journal:  Nutrients        ISSN: 2072-6643            Impact factor:   5.717


  53 in total

Review 1.  Metaproteomic strategies and applications for gut microbial research.

Authors:  Mingming Xiao; Junjun Yang; Yuxin Feng; Yan Zhu; Xin Chai; Yuefei Wang
Journal:  Appl Microbiol Biotechnol       Date:  2017-03-14       Impact factor: 4.813

Review 2.  Action and function of Faecalibacterium prausnitzii in health and disease.

Authors:  Carmen Veríssima Ferreira-Halder; Alessandra Valéria de Sousa Faria; Sheila Siqueira Andrade
Journal:  Best Pract Res Clin Gastroenterol       Date:  2017-09-18       Impact factor: 3.043

3.  Metabolic memory for vascular disease in diabetes.

Authors:  Pablo J Aschner; Alvaro J Ruiz
Journal:  Diabetes Technol Ther       Date:  2012-06       Impact factor: 6.118

Review 4.  Current understanding of the role of gut dysbiosis in type 1 diabetes.

Authors:  Ahmed M Abdellatif; Nora E Sarvetnick
Journal:  J Diabetes       Date:  2019-04-22       Impact factor: 4.006

Review 5.  Microbial metaproteomics for characterizing the range of metabolic functions and activities of human gut microbiota.

Authors:  Weili Xiong; Paul E Abraham; Zhou Li; Chongle Pan; Robert L Hettich
Journal:  Proteomics       Date:  2015-05-28       Impact factor: 3.984

Review 6.  Microbial genes and pathways in inflammatory bowel disease.

Authors:  Melanie Schirmer; Ashley Garner; Hera Vlamakis; Ramnik J Xavier
Journal:  Nat Rev Microbiol       Date:  2019-08       Impact factor: 60.633

7.  Dietary Macronutrient Composition in Relation to Circulating HDL and Non-HDL Cholesterol: A Federated Individual-Level Analysis of Cross-Sectional Data from Adolescents and Adults in 8 European Studies.

Authors:  Mariona Pinart; Stephanie Jeran; Heiner Boeing; Marta Stelmach-Mardas; Marie Standl; Holger Schulz; Carla Harris; Andrea von Berg; Gunda Herberth; Sybille Koletzko; Jakob Linseisen; Taylor A Breuninger; Ute Nöthlings; Janett Barbaresko; Stefan Benda; Carl Lachat; Chen Yang; Paolo Gasparini; Antonietta Robino; Gemma Rojo-Martínez; Luís Castaño; Michèle Guillaume; Anne-Françoise Donneau; Axelle Hoge; Nicolas Gillain; Demetris Avraam; Paul R Burton; Jildau Bouwman; Tobias Pischon; Katharina Nimptsch
Journal:  J Nutr       Date:  2021-08-07       Impact factor: 4.798

8.  Orchestrating privacy-protected big data analyses of data from different resources with R and DataSHIELD.

Authors:  Yannick Marcon; Tom Bishop; Demetris Avraam; Xavier Escriba-Montagut; Patricia Ryser-Welch; Stuart Wheater; Paul Burton; Juan R González
Journal:  PLoS Comput Biol       Date:  2021-03-30       Impact factor: 4.475

Review 9.  Exocrine Pancreas Dysfunction in Type 1 Diabetes.

Authors:  Timothy P Foster; Brittany Bruggeman; Martha Campbell-Thompson; Mark A Atkinson; Michael J Haller; Desmond A Schatz
Journal:  Endocr Pract       Date:  2020-12       Impact factor: 3.443

10.  Analysis of gut microbiota of obese individuals with type 2 diabetes and healthy individuals.

Authors:  Aftab Ahmad; Wanwei Yang; Guofang Chen; Muhammad Shafiq; Sundus Javed; Syed Shujaat Ali Zaidi; Ramla Shahid; Chao Liu; Habib Bokhari
Journal:  PLoS One       Date:  2019-12-31       Impact factor: 3.240

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  1 in total

Review 1.  Utilization of Host and Microbiome Features in Determination of Biological Aging.

Authors:  Karina Ratiner; Suhaib K Abdeen; Kim Goldenberg; Eran Elinav
Journal:  Microorganisms       Date:  2022-03-21
  1 in total

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