Literature DB >> 35005574

Aspergillus diversity from the Gcwihaba Cave in Botswana and description of one new species.

C M Visagie1, M Goodwell2, D O Nkwe2.   

Abstract

A fungal survey of the Gcwihaba Cave from Botswana found Aspergillus to be one of the more common fungal genera isolated. The 81 Aspergillus strains were identified using CaM sequences and comparing these to a curated reference dataset. Nineteen species were identified representing eight sections (sections Candidi, Circumdati, Flavi, Flavipedes, Nidulantes, Nigri, Terrei and Usti). One strain could not be identified. Morphological characterisation and multigene phylogenetic analyses confirmed it as a new species in section Flavipedes and we introduce it below as A. okavangoensis. The new species is most similar to A. iizukae, both producing conidiophores with vesicles typically wider than 20 μm. The new species, however, does not produce Hülle cells and its colonies grow slower than those of A. iizukae on CYA at 37 °C (14-15 vs 18-21 mm) and CREA (15-16 vs 23-41mm).
© 2021 Westerdijk Fungal Biodiversity Institute.

Entities:  

Keywords:  Southern Africa; fungal diversity; new taxon; series Flavipedes

Year:  2021        PMID: 35005574      PMCID: PMC8687055          DOI: 10.3114/fuse.2021.08.07

Source DB:  PubMed          Journal:  Fungal Syst Evol        ISSN: 2589-3823


  22 in total

1.  Molecular diagnostics of clinical strains of filamentous Basidiomycetes.

Authors:  G S de Hoog; A H Gerrits van den Ende
Journal:  Mycoses       Date:  1998 May-Jun       Impact factor: 4.377

2.  Phylogeny, identification and nomenclature of the genus Aspergillus.

Authors:  R A Samson; C M Visagie; J Houbraken; S-B Hong; V Hubka; C H W Klaassen; G Perrone; K A Seifert; A Susca; J B Tanney; J Varga; S Kocsubé; G Szigeti; T Yaguchi; J C Frisvad
Journal:  Stud Mycol       Date:  2014-06       Impact factor: 16.097

3.  PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses.

Authors:  Robert Lanfear; Paul B Frandsen; April M Wright; Tereza Senfeld; Brett Calcott
Journal:  Mol Biol Evol       Date:  2017-03-01       Impact factor: 16.240

4.  Cultivable microscopic fungi from an underground chemosynthesis-based ecosystem: a preliminary study.

Authors:  Alena Nováková; Vít Hubka; Šárka Valinová; Miroslav Kolařík; Alexandra Maria Hillebrand-Voiculescu
Journal:  Folia Microbiol (Praha)       Date:  2017-05-28       Impact factor: 2.099

5.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

6.  Psychrophilic and psychrotolerant fungi on bats and the presence of Geomyces spp. on bat wings prior to the arrival of white nose syndrome.

Authors:  Lynnaun J A N Johnson; Andrew N Miller; Robert A McCleery; Rod McClanahan; Joseph A Kath; Shiloh Lueschow; Andrea Porras-Alfaro
Journal:  Appl Environ Microbiol       Date:  2013-06-28       Impact factor: 4.792

7.  Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes.

Authors:  N L Glass; G C Donaldson
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

8.  MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.

Authors:  Fredrik Ronquist; Maxim Teslenko; Paul van der Mark; Daniel L Ayres; Aaron Darling; Sebastian Höhna; Bret Larget; Liang Liu; Marc A Suchard; John P Huelsenbeck
Journal:  Syst Biol       Date:  2012-02-22       Impact factor: 15.683

9.  IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.

Authors:  Lam-Tung Nguyen; Heiko A Schmidt; Arndt von Haeseler; Bui Quang Minh
Journal:  Mol Biol Evol       Date:  2014-11-03       Impact factor: 16.240

10.  Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees.

Authors:  Ivica Letunic; Peer Bork
Journal:  Nucleic Acids Res       Date:  2016-04-19       Impact factor: 16.971

View more
  1 in total

1.  Seven Undescribed Aspergillus Species from Different Niches in Korea.

Authors:  Monmi Pangging; Thuong T T Nguyen; Hyang Burm Lee
Journal:  Mycobiology       Date:  2022-09-05       Impact factor: 1.946

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.