| Literature DB >> 35004283 |
Jiawei Chen1,2,3, Shuchen Sun1,2,3, Leihao Ren1,2,3, Lingyang Hua1,2,3, Daijun Wang1,2,3, Qing Xie1,2,3, Hans-Georg Wirsching4, Jiaojiao Deng1,2,3, Michael Weller4, Ye Gong1,2,3,5.
Abstract
BACKGROUND: Meningiomas are the most common primary intracranial tumors in adults. According to the 2021 World Health Organization (WHO) classification of central nervous system tumors, approximately 80% of meningiomas are WHO grade 1, that is, histopathologically benign, whereas about 20% are WHO grade 2 or grade 3, showing signs of atypia or malignancy. The dysregulation of N6-methylation (m6A) regulators is associated with disorders of diverse critical biological processes in human cancer. This study aimed to explore whether m6A regulator expression was associated with meningioma molecular subtypes and immune infiltration.Entities:
Keywords: WGCNA; immune infiltration; m6A; meningioma; molecular subtype
Year: 2021 PMID: 35004283 PMCID: PMC8727752 DOI: 10.3389/fonc.2021.760892
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Meningioma gene expression data from GEO database.
| Dataset ID | Platform | Samples |
|---|---|---|
| GSE136661 | GPL20301 | 160 |
| GSE43290 | GPL96 | 51 |
Figure 1(A) Location of 19 m6A regulators on 23 chromosomes using GSE136661 cohort. (B) Clustering of meningioma samples. (C) Correlations between among 19 m6A regulators in the GSE136661 cohort using Spearman analysis. Negative correlation was marked with blue and positive correlation with red. (D) Heatmap of the expression of 19 m6A regulators in two distinct m6A clusters. (E) Heatmap of immune cell infiltration in two distinct m6A clusters. (F) Heatmap of the expression of inflammatory reaction-related genes in two distinct m6A clusters (* P < 0.05; *** P < 0.005; **** P < 0.001).
Figure 2(A–C) Gene Ontology terms in the biological process, cellular component, and molecular function categories. (D) Enrichment plot conducted via KEGG analysis.
Figure 3(A) Expression of 32 key hub genes in two distinct m6A clusters. (B) Expression of 32 key hub genes in different meningioma WHO grades (Grade 1 vs Grade 2–3). (C) Expression of 32 key hub genes at different ages of patients with meningioma (<70 years old vs ≥70 years old). (* P < 0.05; ** P < 0.01; *** P < 0.005; **** P < 0.001).
Figure 4(A) Expression of 18 key hub genes between normal meningeal tissues and meningioma tissues. (B) Heatmap of the expression of 32 key hub genes between two different meningioma molecular subtypes. (C) Expression of 32 key hub genes in two different meningioma molecular subtypes. (* P < 0.05; ** P < 0.01; *** P < 0.005; ns, Non-significant.
Figure 5Relation diagram of meningioma WHO grades, m6A clusters, molecular subtypes, sex, and age.