Literature DB >> 35003830

CeliacNet: Celiac Disease Severity Diagnosis on Duodenal Histopathological Images Using Deep Residual Networks.

Rasoul Sali1, Lubaina Ehsan2, Kamran Kowsari1, Marium Khan2, Christopher A Moskaluk2, Sana Syed2,3, Donald E Brown1,3.   

Abstract

Celiac Disease (CD) is a chronic autoimmune disease that affects the small intestine in genetically predisposed children and adults. Gluten exposure triggers an inflammatory cascade which leads to compromised intestinal barrier function. If this enteropathy is unrecognized, this can lead to anemia, decreased bone density, and, in longstanding cases, intestinal cancer. The prevalence of the disorder is 1% in the United States. An intestinal (duodenal) biopsy is considered the "gold standard" for diagnosis. The mild CD might go unnoticed due to non-specific clinical symptoms or mild histologic features. In our current work, we trained a model based on deep residual networks to diagnose CD severity using a histological scoring system called the modified Marsh score. The proposed model was evaluated using an independent set of 120 whole slide images from 15 CD patients and achieved an AUC greater than 0.96 in all classes. These results demonstrate the diagnostic power of the proposed model for CD severity classification using histological images.

Entities:  

Keywords:  Celiac Disease; Deep Learning; Duodenal Histopathological Images; Marsh Score; Medical Imaging; Residual Networks

Year:  2020        PMID: 35003830      PMCID: PMC8740775          DOI: 10.1109/bibm47256.2019.8983270

Source DB:  PubMed          Journal:  Proceedings (IEEE Int Conf Bioinformatics Biomed)        ISSN: 2156-1125


  16 in total

Review 1.  The histopathology of coeliac disease: time for a standardized report scheme for pathologists.

Authors:  G Oberhuber; G Granditsch; H Vogelsang
Journal:  Eur J Gastroenterol Hepatol       Date:  1999-10       Impact factor: 2.566

2.  MuDeRN: Multi-category classification of breast histopathological image using deep residual networks.

Authors:  Ziba Gandomkar; Patrick C Brennan; Claudia Mello-Thoms
Journal:  Artif Intell Med       Date:  2018-04-26       Impact factor: 5.326

3.  Structure-Preserving Color Normalization and Sparse Stain Separation for Histological Images.

Authors:  Abhishek Vahadane; Tingying Peng; Amit Sethi; Shadi Albarqouni; Lichao Wang; Maximilian Baust; Katja Steiger; Anna Melissa Schlitter; Irene Esposito; Nassir Navab
Journal:  IEEE Trans Med Imaging       Date:  2016-04-27       Impact factor: 10.048

4.  Development and Validation of a Deep Learning Algorithm for Detection of Diabetic Retinopathy in Retinal Fundus Photographs.

Authors:  Varun Gulshan; Lily Peng; Marc Coram; Martin C Stumpe; Derek Wu; Arunachalam Narayanaswamy; Subhashini Venugopalan; Kasumi Widner; Tom Madams; Jorge Cuadros; Ramasamy Kim; Rajiv Raman; Philip C Nelson; Jessica L Mega; Dale R Webster
Journal:  JAMA       Date:  2016-12-13       Impact factor: 56.272

5.  Patch-based Convolutional Neural Network for Whole Slide Tissue Image Classification.

Authors:  Le Hou; Dimitris Samaras; Tahsin M Kurc; Yi Gao; James E Davis; Joel H Saltz
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2016 Jun-Jul

Review 6.  Current approaches to diagnosis and treatment of celiac disease: an evolving spectrum.

Authors:  A Fasano; C Catassi
Journal:  Gastroenterology       Date:  2001-02       Impact factor: 22.682

7.  Prevalence of celiac disease in at-risk and not-at-risk groups in the United States: a large multicenter study.

Authors:  Alessio Fasano; Irene Berti; Tania Gerarduzzi; Tarcisio Not; Richard B Colletti; Sandro Drago; Yoram Elitsur; Peter H R Green; Stefano Guandalini; Ivor D Hill; Michelle Pietzak; Alessandro Ventura; Mary Thorpe; Debbie Kryszak; Fabiola Fornaroli; Steven S Wasserman; Joseph A Murray; Karoly Horvath
Journal:  Arch Intern Med       Date:  2003-02-10

8.  Deep Convolutional Neural Networks for breast cancer screening.

Authors:  Hiba Chougrad; Hamid Zouaki; Omar Alheyane
Journal:  Comput Methods Programs Biomed       Date:  2018-01-11       Impact factor: 5.428

9.  Deep Residual Network Predicts Cortical Representation and Organization of Visual Features for Rapid Categorization.

Authors:  Haiguang Wen; Junxing Shi; Wei Chen; Zhongming Liu
Journal:  Sci Rep       Date:  2018-02-28       Impact factor: 4.379

10.  Automated Detection of Celiac Disease on Duodenal Biopsy Slides: A Deep Learning Approach.

Authors:  Jason W Wei; Jerry W Wei; Christopher R Jackson; Bing Ren; Arief A Suriawinata; Saeed Hassanpour
Journal:  J Pathol Inform       Date:  2019-03-08
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  3 in total

1.  Automated detection of celiac disease using Machine Learning Algorithms.

Authors:  Cristian-Andrei Stoleru; Eva H Dulf; Lidia Ciobanu
Journal:  Sci Rep       Date:  2022-03-08       Impact factor: 4.379

2.  Neural network methods for diagnosing patient conditions from cardiopulmonary exercise testing data.

Authors:  Donald E Brown; Suchetha Sharma; James A Jablonski; Arthur Weltman
Journal:  BioData Min       Date:  2022-08-13       Impact factor: 4.079

Review 3.  Artificial intelligence as a tool for diagnosis in digital pathology whole slide images: A systematic review.

Authors:  João Pedro Mazuco Rodriguez; Rubens Rodriguez; Vitor Werneck Krauss Silva; Felipe Campos Kitamura; Gustavo Cesar Antônio Corradi; Ana Carolina Bertoletti de Marchi; Rafael Rieder
Journal:  J Pathol Inform       Date:  2022-09-08
  3 in total

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