| Literature DB >> 35003667 |
Prabha Amarasinghe1,2,3,4, Narayani Barve2, Hashendra Kathriarachchi5, Bette Loiselle3,6,7, Nico Cellinese2,3.
Abstract
Recent climate projections have shown that the distribution of organisms in island biotas is highly affected by climate change. Here, we present the result of the analysis of niche dynamics of a plant group, Memecylon, in Sri Lanka, an island, using species occurrences and climate data. We aim to determine which climate variables explain current distribution, model how climate change impacts the availability of suitable habitat for Memecylon, and determine conservation priority areas for Sri Lankan Memecylon. We used georeferenced occurrence data of Sri Lankan Memecylon to develop ecological niche models and assess both current and future potential distributions under six climate change scenarios in 2041-2060 and 2061-2080. We also overlaid land cover and protected area maps and performed a gap analysis to understand the impacts of land-cover changes on Memecylon distributions and propose new areas for conservation. Differences among suitable habitats of Memecylon were found to be related to patterns of endemism. Under varying future climate scenarios, endemic groups were predicted to experience habitat shifts, gains, or losses. The narrow endemic Memecylon restricted to the montane zone were predicted to be the most impacted by climate change. Projections also indicated that changes in species' habitats can be expected as early as 2041-2060. Gap analysis showed that while narrow endemic categories are considerably protected as demonstrated by their overlap with protected areas, more conservation efforts in Sri Lankan forests containing wide endemic and nonendemic Memecylon are needed. This research helped clarify general patterns of responses of Sri Lankan Memecylon to global climate change. Data from this study are useful for designing measures aimed at filling the gaps in forest conservation on this island.Entities:
Keywords: Memecylon; Sri Lanka; climate change; ecological niche models; gap analysis; habitat suitability
Year: 2021 PMID: 35003667 PMCID: PMC8717329 DOI: 10.1002/ece3.8415
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 2.912
FIGURE 1Memecylon rotundatum in Sri Pada Mountain, Central Province, Sri Lanka. (a) vegetative and (b) reproductive morphology. Photography: Prabha Amarasinghe
FIGURE 2(a) Climate zones (b) elevation zones. Purple dots show Memecylon occurrences. Maroon circles show the field collection sites
Distribution and endemism categories of 23 Memecylon in Sri Lanka, and the number of occurrences (after data cleaning) used to generate niche models for each species
| Species | Distribution | Category | Occurrence points |
|---|---|---|---|
|
| Dry zone lowlands, coastal | Nonendemic dry zone | 25 |
|
| Wet zone lowlands | Nonendemic wet zone | 47 |
|
| Montane | Narrow endemic‐montane | 15 |
|
| Wet zone lowlands | Narrow endemic‐lowland | 18 |
|
| Wet zone lowlands | Narrow endemic‐lowland | 17 |
|
| Wet zone lowlands | Nonendemic wet zone | 25 |
|
| Wet zone lowlands | Nonendemic wet zone | 18 |
|
| Wet zone lowlands | Narrow endemic‐lowland | 20 |
|
| Montane | Narrow endemic‐montane | 17 |
|
| Montane | Narrow endemic‐montane | 16 |
|
| Dry zone lowlands | Nonendemic dry zone | 21 |
|
| Wet zone lowlands | Narrow endemic‐lowland | 18 |
|
| Wet and intermediate zones | Wide endemic | 21 |
|
| Wet zone lowlands | Narrow endemic‐lowland | 35 |
|
| Wet zone lowlands | Narrow endemic‐lowland | 25 |
|
| Wet zone lowland and montane | Narrow endemic‐montane | 15 |
|
| Wet zone low‐medium elevations | Wide endemic | 20 |
|
| Dry zone and wet zone | Wide endemic | 32 |
|
| Dry and arid zones low elevations | Nonendemic dry zone | 30 |
|
| Dry to intermediate zone | Wide endemic | 20 |
|
| Wet zone lowlands | Narrow endemic‐lowland | 31 |
Bioclimatic variables (Hijmans et al., 2005) indicated as used or not used (based on collinearity analysis) for model generation
| BioClim Code | Variable name and description | Used or not |
|---|---|---|
| bio1 | Annual mean temperature | Not |
| bio2 | Mean diurnal range (mean of monthly (maximum temp − minimum temp)) | Used |
| bio3 | Isothermality (bio2/bio7) (×100) | Used |
| bio4 | Temperature seasonality (standard deviation × 100) | Used |
| bio5 | Maximum temperature of warmest month | Used |
| bio6 | Minimum temperature of coldest month | Not |
| bio7 | Temperature annual range (bio5–bio6) | Used |
| bio8 | Mean temperature of wettest quarter | Used |
| bio9 | Mean temperature of driest quarter | Not |
| bio10 | Mean temperature of warmest quarter | Not |
| bio11 | Mean temperature of coldest quarter | Used |
| bio12 | Annual precipitation | Not |
| bio13 | Precipitation of wettest month | Used |
| bio14 | Precipitation of driest month | Not |
| bio15 | Precipitation seasonality | Not |
| bio16 | Precipitation of wettest quarter | Not |
| bio17 | Precipitation of driest quarter | Not |
| bio18 | Precipitation of warmest quarter | Used |
| bio19 | Precipitation of coldest quarter | Used |
Bioclimatic variable contribution based on jackknifing (AUC with and without contributing variables) and permutation importance
| Species | FC | RM | Selected bioclimatic variables | AUC without the variable | AUC only with the contributing variable | Permutation importance (%) |
|---|---|---|---|---|---|---|
|
| LQ | 2.5 | bio2 | 0.67 | 0.64 | 20.6 |
| bio4 | 0.63 | 0.67 | 77.1 | |||
| bio11 | 0.70 | 0.39 | 2.1 | |||
|
| LQH | 4 | bio3 | 0.92 | 0.79 | 10.6 |
| bio4 | 0.91 | 0.85 | 50.8 | |||
| bio 7 | 0.91 | 0.71 | 23.5 | |||
| bio11 | 0.89 | 0.70 | 12.4 | |||
| bio13 | 0.93 | 0.80 | 2.5 | |||
|
| L | 1 | bio3 | 0.99 | 0.93 | 6.8 |
| bio 7 | 0.99 | 0.73 | 0.1 | |||
| bio11 | 0.99 | 0.98 | 13.0 | |||
| bio19 | 0.99 | 0.95 | 79.9 | |||
|
| LQ | 2.5 | bio3 | 0.93 | 0.75 | 1.4 |
| bio 4 | 0.92 | 0.79 | 32.1 | |||
| bio 7 | 0.92 | 0.75 | 9.6 | |||
| bio11 | 0.86 | 0.85 | 56.6 | |||
|
| L | 1 | bio5 | 0.89 | 0.70 | 9.4 |
| bio7 | 0.84 | 0.82 | 63.7 | |||
| bio11 | 0.84 | 0.76 | 5.2 | |||
| bio18 | 0.85 | 0.84 | 26.8 | |||
|
| L | 1 | bio3 | 0.93 | 0.52 | 3.1 |
| bio7 | 0.90 | 0.79 | 38.9 | |||
| bio8 | 0.92 | 0.50 | 1.3 | |||
| bio18 | 0.88 | 0.90 | 56.5 | |||
|
| L | 1 | bio3 | 0.87 | 0.64 | 1.1 |
| bio4 | 0.83 | 0.88 | 64.7 | |||
| bio7 | 0.89 | 0.82 | 34.1 | |||
|
| LQ | 1 | bio4 | 0.93 | 0.86 | 63.5 |
| bio7 | 0.94 | 0.94 | 4.12 | |||
| bio11 | 0.90 | 0.77 | 19.9 | |||
| bio19 | 0.93 | 0.81 | 12.39 | |||
|
| L | 1 | bio3 | 0.98 | 0.88 | 1.5 |
| bio7 | 0.98 | 0.78 | 0.1 | |||
| bio11 | 0.91 | 0.98 | 92.0 | |||
| bio19 | 0.98 | 0.88 | 6.2 | |||
|
| L | 1 | bio3 | 0.97 | 0.84 | 12.1 |
| bio7 | 0.97 | 0.77 | 0.04 | |||
| bio11 | 0.82 | 0.97 | 87.3 | |||
| bio19 | 0.92 | 0.61 | 0.39 | |||
|
| L | 2.5 | bio2 | 0.74 | 0.62 | 19.3 |
| bio13 | 0.62 | 0.74 | 80.6 | |||
|
| L | 1 | bio3 | 0.89 | 0.67 | 8.3 |
| bio4 | 0.90 | 0.88 | 45.9 | |||
| bio7 | 0.90 | 0.84 | 23.3 | |||
| bio19 | 0.89 | 0.80 | 22.4 | |||
|
| L | 1 | bio3 | 0.82 | 0.59 | 1.5 |
| bio4 | 0.63 | 0.82 | 97.1 | |||
| bio11 | 0.82 | 0.60 | 1.3 | |||
|
| LQH | 4 | bio3 | 0.94 | 0.77 | 1.7 |
| bio4 | 0.93 | 0.89 | 15.9 | |||
| bio7 | 0.93 | 0.81 | 10.5 | |||
| bio11 | 0.91 | 0.68 | 10.5 | |||
| bio13 | 0.92 | 0.89 | 61.1 | |||
|
| LQH | 2.5 | bio3 | 0.88 | 0.75 | 13.4 |
| bio4 | 0.76 | 0.87 | 80.9 | |||
| bio11 | 0.87 | 0.52 | 5.5 | |||
|
| L | 1 | bio3 | 0.95 | 0.69 | 0.043 |
| bio4 | 0.93 | 0.77 | 74.45 | |||
| bio11 | 0.90 | 0.95 | 22.8 | |||
| bio19 | 0.96 | 0.81 | 2.64 | |||
|
| L | 2.5 | bio3 | 0.81 | 0.63 | 20.7 |
| bio4 | 0.64 | 0.81 | 71.5 | |||
| bio11 | 0.82 | 0.52 | 7.6 | |||
|
| L | 1 | bio4 | 0.69 | 0.76 | 76.2 |
| bio11 | 0.76 | 0.65 | 5.0 | |||
| bio13 | 0.78 | 0.66 | 18.6 | |||
|
| LQH | 1 | bio3 | 0.67 | 0.62 | 14.3 |
| bio4 | 0.62 | 0.67 | 80.0 | |||
| bio11 | 0.50 | 0.50 | 5.6 | |||
|
| L | 1 | bio4 | 0.75 | 0.76 | 68.07 |
| bio11 | 0.78 | 0.73 | 20.63 | |||
| bio19 | 0.84 | 0.57 | 11.29 | |||
|
| LQH | 2.5 | bio3 | 0.89 | 0.79 | 11.4 |
| bio7 | 0.81 | 0.76 | 51.18 | |||
| bio11 | 0.84 | 0.66 | 25.08 | |||
| bio13 | 0.91 | 0.71 | 12.2 |
FC, Feature Class (L: linear, Q: quadratic, H: hinge); RM, Regularization Multiplier.
Selected bioclimatic variables are species‐specific predictors.
Extent (km2) of suitable habitat for each species after assigning threshold values under current and future climate conditions
| Taxon | Current suitable habitats | Niche breadth | Future suitable habitats | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2050 | 2070 | |||||||||||||
| B2.6 | B4.5 | B8.5 | M2.6 | M4.5 | M8.5 | B2.6 | B4.5 | B8.5 | M2.6 | M4.5 | M8.5 | |||
|
| 20,169 [0.42] | 0.81 | 33,562 (64) | 28,055 (39) | 34,954 (73) | 2447 (21) | 25,455 (26) | 25,206 (24) | 27,147 (34) | 24,254 (20) | 26,568 (31) | 33,561 (66) | 29,072 (44) | 26,519 (31) |
|
| 5656 [0.56] | 0.23 | 22,846 (30) | 7505 (32) | 0 (−100) | 16,923 (199) | 15,392 (172) | 8805 (55) | 20,990 (271) | 15,280 (170) | 7013 (23) | 21,566 (281) | 18,252 (222) | 8799 (55) |
|
| 4812 [0.11] | 0.11 | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) |
|
| 6094 [0.49] | 0.11 | 10,393 (70) | 19,087 (213) | 19,087 (213) | 24,509 (302) | 11,845 (94) | 8510 (39) | 20,172 (231) | 19,966 (227) | 9572 (57) | 15,093 (147) | 12,986 (113) | 11,565 (89) |
|
| 5852 [0.29] | 0.49 | 3355 (−43) | 5862 (0) | 5657 (−3) | 161 (−97) | 3881 (−33) | 2952 (−49) | 1427 (−76) | 5146 (−12) | 2360 (−60) | 21 (−99) | 2208 (−62) | 218 (−96) |
|
| 4453 [0.42] | 0.53 | 10,023 (125) | 8946 (101) | 12,233 (175) | 6001 (35) | 4655 (5) | 2768 (−38) | 8695 (95) | 7841 (76) | 9606 (116) | 4169 (−6) | 8790 (97) | 4089 (−8) |
|
| 8498 [0.33] | 0.46 | 26,881 (216) | 28,719 (238) | 25,305 (198) | 24,783 (192) | 27,314 (221) | 25,992 (206) | 24,321 (186) | 50,007 (488) | 29,110 (243) | 51,511 (506) | 28,136 (231) | 24,654 (190) |
|
| 6451 [0.11] | 0.33 | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) |
|
| 3063 [0.37] | 0.28 | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) |
|
| 4027 [0.38] | 0.21 | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) |
|
| 18,259 [0.47] | 0.82 | 23,143 (27) | 22,070 (21) | 21,768 (19) | 22,594 (24) | 23,702 (30) | 21,813 (19) | 18,582 (2) | 21,208 (16) | 18,645 (2) | 20,258 (11) | 22,870 (25) | 26,277 (44) |
|
| 3146 [0.78] | 0.43 | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) |
|
| 14,152 [0.11] | 0.50 | 26,881 (90) | 28,719 (103) | 25,305 (79) | 24,783 (75) | 27,314 (93) | 25,992 (84) | 24,321 (72) | 12,861 (−9) | 29,110 (106) | 24,654 (74) | 28,136 (99) | 25,561 (81) |
|
| 5306 [0.85] | 0.43 | 5320 (0.2) | 11,032 (107) | 0 (−100) | 5382 (1) | 15,208 (186) | 12,510 (135) | 9091 (71) | 11,851 (123) | 11,363 (114) | 6003 (13) | 19,537 (268) | 11,881 (123) |
|
| 7753 [0.60] | 0.53 | 2854 (−63) | 11,851 (52) | 4511 (−41) | 4020 (−48) | 15,208 (96) | 12,510 (61) | 3598 (−53) | 3598 (−53) | 5312 (−31) | 6379 (−17) | 6379 (−17) | 5170 (−33) |
|
| 4260 [0.59] | 0.37 | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) |
|
| 15,993 [0.40] | 0.62 | 35,229 (120) | 37,671 (136) | 34,318 (115) | 43,038 (169) | 36,760 (130) | 42,842 (168) | 33,737 (111) | 42,296 (164) | 38,346 (140) | 34,709 (117) | 36,644 (129) | 43,509 (172) |
|
| 17,843 [0.48] | 0.71 | 34,416 (93) | 23,225 (30) | 32,147 (80) | 24,119 (35) | 24,603 (38) | 30,808 (73) | 15,454 (−13) | 32,032 (80) | 26,742 (50) | 27,008 (51) | 29,088 (63) | 16,963 (−5) |
|
| 19,077 [0.48] | 0.81 | 18,068 (−5) | 19,841 (4) | 16,321 (−14) | 20,420 (7) | 17,985 (−6) | 16,767 (−12) | 19,749 (4) | 17,320 (−9) | 18,850 (−1) | 19,743 (3) | 19,142 (0) | 16,637 (−13) |
|
| 9640 [0.64] | 0.53 | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) | 0 (−100) |
|
| 7314 [0.36] | 0.49 | 7853 (7) | 14,282 (95) | 15,808 (116) | 25,599 (250) | 15,993 (118) | 9294 (27) | 16,189 (121) | 18,431 (150) | 15,296 (109) | 47,703 (552) | 22,625 (209) | 18,039 (146) |
BCC‐CSM1‐1 and MIROC5 are abbreviated as B and M, respectively.
Niche breadth values used to determine endemic categories are also provided. Cohen's KAPPA statistics which measure model performance are provided in square brackets in the current suitable habitats column and % changes (+ values are suitable habitat increases and – values are habitat reductions) are provided in parentheses in Future suitable habitats columns.
FIGURE 3Overlapping suitable habitats of endemic Memecylon categories under current climate and future climate scenarios. Three major panels show: top‐panel/(1) Overlapped current suitable habitats, mid‐panel/(2) Overlapped suitable habitats in 2050 (MIROC5‐RCP2.6 scenario), and bottom‐panel/(3) Overlapped suitable habitats in 2070 (MIROC5‐RCP2.6 scenario). In each of the three panels, endemic categories are provided as (a) wide endemics; (b) narrow endemics restricted to lowland; (c) narrow endemics montane zone; (d) nonendemic Memecylon in the dry zone; and (e) nonendemics in the wet zone. In each of the three panels, (a) shows the overlapping suitable habitats and (b) shows the uncertainty maps of each endemic category. The color spectrum at the right of the maps in the map set (a) shows the number of species in each grid cell. Color code in the maps in the map set (b) shows the uncertainty of the prediction of species presence: turquoise areas that always predict species is present, brown areas with different predictions of species presence or absence, gray areas that species is absent
FIGURE 4Over‐laid forest cover (source: Rathnayake et al., 2020) and protected areas maps (source: WDPA) with the current richness areas (areas show habitats where all species overlap in darkest purple) of (a) wide endemics; (b) narrow endemics restricted to lowland; (c) narrow endemics montane zone; (d) nonendemic Memecylon in dry zone; and (e) nonendemics in the wet zone. Suitable habitats of individual species are shown in purple shades. The darkest purple represents the highest overlap areas for species richness; green represents forest cover; and orange represents protected areas
FIGURE 5Over‐laid protected areas maps (source: WDPA) with the future richness areas (areas show habitats where all species overlap in darkest purple) of (a) wide endemics; (b) narrow endemics restricted to lowland; (c) nonendemic Memecylon in the dry zone; and (d) nonendemics in the wet zone; narrow endemics in the montane zone are not shown as no suitable habitat is predicted to occur in future climates. The top panel shows the suitable habitats in 2050 (MIROC52.6). The bottom panel shows the suitable habitats in 2070 (MIROC52.6). Suitable habitats of individual species are shown in purple shades. The darkest purple represents the highest overlap areas for species richness, and orange represents protected areas
Gap analysis using protected area map, land‐use map, and richness area (represent only those areas with a maximum number of overlapping species) maps
| Current | Future | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| (2050‐MIROC5‐2.6) | (2070‐MIROC5‐2.6) | |||||||||
| Category | Richness area (km2) | Extent within all protected (km2) | Extent within conservation forest (km2) | Extent within forests (km2) | Richness area (km2) | Extent within all protected (km2) | Extent within conserved forests (km2) | Richness area (km2) | Extent within all protected (km2) | Extent within conserved forests (km2) |
| Wide endemic | 7235 | 425 | 108 | 1288 | 6875 | 7 | 7 | 9463 | 22 | 22 |
| Lowland narrow endemic | 291 | 35 | 13 | 125 | 356 | 0.7 | 0.06 | 99 | 0.2 | 0.09 |
| Montane narrow endemic | 1326 | 352 | 180 | 615 | N/A | N/A | N/A | N/A | N/A | N/A |
| Nonendemic dry zone | 3946 | 106 | 93 | 786 | 1070 | 10 | 8 | 46 | 0.9 | 0.9 |
| Nonendemic wet zone | 4239 | 250 | 47 | 840 | 19 | 0 | 0 | 2059 | 16 | 6 |
Richness areas = Richness area of the category. Extent within all protected = Extent of each category overlapped with all types of protected lands in the protected area map. Extent within conservation forest = Extent of each category overlapped with conservation forests in the protected area map. Extent within forests = Extent of each category within Forest in the land‐cover map. N/A = not applicable due to total loss of overlapping areas.
Estimates are provided as area overlapping lands in each category and the extent of each category within protected lands and forests. Both protected area map and land‐use map are used for current models, but only protected area map is used for future models.
FIGURE 6Areas recommended for conservation. (a) Conservation recommendation map: current richness areas (areas show habitats where the highest number of species overlap) of endemism categories, forest cover (source: Rathnayake et al., 2020), and protected areas maps (source: WDPA) are superimposed. The forests which require conservation are within the areas demarcated in magenta. These areas include both the purple areas within these demarcations represent high confidence richness areas (these are obtained from multiple model iterations and purple shows all model iterations for the highest number of species predict present) and richness area of dry‐zone nonendemic Memecylon in the northern part of the island which is not within the high confidence richness areas. (b) Uncertainty map: The uncertain richness areas (at least one model iteration for all species predicts presence) are shown in blue and the high confidence nonrichness areas (at least one species is predicted to be absent in all model iterations) are shown in white