| Literature DB >> 35000728 |
Connie Newman1, Cassandra Henderson2, Danielle Laraque-Arena3.
Abstract
Entities:
Mesh:
Year: 2021 PMID: 35000728 PMCID: PMC8674513 DOI: 10.1016/j.jnma.2021.12.004
Source DB: PubMed Journal: J Natl Med Assoc ISSN: 0027-9684 Impact factor: 1.798
COVID-19 Test Accuracy with varying Disease Prevalence.
| TESTING | SPECIMEN | TEST TIME | SENSITIVITY** | SPECIFICITY** | 50% PREVALENCE PPV/CLINICAL ACCURACY | 0.9% PREVALENCE PPV/CLINICAL ACCURACY | 50% PREVALENCE NPV/CLINICAL ACCURACY | 0.9% |
|---|---|---|---|---|---|---|---|---|
| Nasal, saliva pharyngeal, | One to seven days | 94% (95%CI 81.5%-99.3% | 68% (95% CI 83% to 98.8% | 82% to 98% | 32% to 83% | 81% to 99% | 97% to 99% | |
| bronchoalveolar | 2% to 18% False Negative | 17% to 68% False Negative | 1% to 19% False Positive | 1% to 3% False Positive | ||||
| nasal, pharyngeal | 15 minutes | 56.2% (95%0CI 29.5-79.8% | 99.5% (95%CI 98.1% to 99.9%) | available data Insufficient to calculate clinical accuracy | available data Insufficient to calculate clinical accuracy | available data insufficient to calculate clinical accuracy | available data insufficient to calculate clinical accuracy | |
| Blood or fingerstick sample | 1 to 3days | 18.4% to-96.1% | 96.6% (CI 94.3% to 98.2%) | data | data | data | data | |
Legend: Table 1 summarizes the sensitivity, specificity, predictive value positive (PPV) and predictive value negatives (PPN) for the three classes of tests: molecular (RT-PCR) testing; antigen testing; and antibody COVID-19 testing. PPV varies with disease prevalence when interpreting results from diagnostic tests. PPV is the proportion of positive test results that are true positives. As disease prevalence decreases, the proportion of test results that are false positives increases.
Yang Y, Yang M, Shen C, Wang F, et al, Evaluating the accuracy of different respiratory specimens in the laboratory diagnosis and monitoring the viral shedding of 2019-nCoV infections, medRxiv, Published February 17, 2020, Direct Link: https://www.medrxiv.org/content/10.1101/2020.02.11.20021493v2.full.pdf, DOI: https://doi.org/10.1101/2020.02.11.20021493
Wang W, Xu Y, Gao R, Lu R, Han K, Wu G, Tan W, Detection of SARS-CoV-2 in Different Types of Clinical Specimens, JAMA. 2020 May 12; 323(18): 1843–1844, Published online 2020 Mar 11. Direct Link:, DOI: http://doi.org/10.1001/jama.2020.3786, PMID: 32159775
Dinnes J, Deeks JJ, Adriano A, Berhane S, Davenport C, Dittrich S, Emperador D, Takwoingi Y, Cunningham J, Beese S, Dretzke J, Ferrante di Ru&ano L, Harris IM, Price MJ, Taylor-Phillips S, Hoo- L, Leeflang MMG, Spijker R, Van den Bruel A. Rapid, point-of-care antigen and molecular-based tests for diagnosis of SARS-CoV-2 infection. Cochrane Database of Systematic Reviews 2020, Issue 8. Art. No.: CD013705. doi:10.1002/14651858.CD013705. www.cochranelibrary
Lisboa Bastos M, Tavaziva G, Abidi SK, Campbell JR, Haraoui LP, Johnston JC, Lan Z, Law S, MacLean E, Trajman A, Menzies D, Benedetti A, Ahmad Khan F. Diagnostic accuracy of serological tests for covid-19: systematic review and meta-analysis. BMJ. 2020 Jul 1;370:m2516. doi:10.1136/bmj.m2516. PMID: 32611558; PMCID: PMC7327913.
Vaccines in the United States for Prevention of COVID-19: Approved, or with Emergency Use Authorization (EUA).
| BNT162b2 | mRNA of spike protein | Full approval for age ≥ 16 yr; EUA for age 5-15 yr | ≥ 5 | 95% at ≥ seven days after second dose | 40,277 (51%/ 49%) | 82% W | 26% Hispanic or Latino, |
| mRNA-1273 | mRNA of spike protein | EUA | ≥ 18 | 94% ≥ 14 days after second dose | 27,817 (53%/ 47%) | 79% W | 20% Hispanic or Latino |
| JNJ-78436735 | Adeno-virus non-replicating | EUA | ≥ 18 | 66.9% after two weeks. 66% after four weeks, | 39,321 (55.5%/ 44.5%) | 62% W | 45% Hispanic or Latino, 52% not Hispanic or Latino |
MOA mechanism of action; EUA Emergency Use Authorization; * Efficacy refers to prevention of COVID-19 (positive COVID test) in the study population seven or more days after second dose Pfizer vaccine, 14 or more days after second dose Moderna vaccine, and prevention of moderate to severe COVID-19, two and four weeks after Janssen vaccine. W White, AA African American, A Asian, B/AA Black or African American, AI American Indian, AN Alaskan Native, NH Native Hawaiian, PI Pacific Islander including native Hawaiian, NR not reported, NK not known
References: Center for Disease Control. U.S. COVID-19 Vaccine Product Information. https://www.cdc.gov/vaccines/covid-19/info-by-product/index.html accessed Dec 25, 2021;
FDA Briefing Document. Pfizer-BioNTech COVID-19 Vaccine. Vaccines and Related Biological Products Advisory Committee Meeting, December 10, 2020; FDA Briefing Document. Moderna COVID-19 Vaccine. Vaccines and Related Biological Products Advisory Committee Meeting, December 17, 2020; FDA Briefing Document. Janssen Ad26.COV2.S Vaccine for the Prevention of COVID-19. Vaccines and Related Biological Products Advisory Committee Meeting, February 26, 2021
Table 2 shows important information for each vaccine available in the United States, including status of FDA approval, lower limit for age, effectiveness, and demographics of the efficacy analysis clinical trial population by sex, race, and ethnicity. Table 2 was amended Dec 27, 2021.