| Literature DB >> 34996953 |
Md Mahmudul Hasan Khan1,2, Mohd Y Rafii3,4, Shairul Izan Ramlee5, Mashitah Jusoh5, Md Al Mamun6,7.
Abstract
In a breeding program, studies of genotypic and phenotypic relationships among agricultural crop traits are useful to design, evaluate, and develop selection criteria for desirable traits. Using path coefficient analysis, the present study was executed to estimate the phenotypic, genotypic, and environmental correlation coefficients between yield and yield-related traits and to determine the direct and indirect effects of yield-related traits on yield per plant. A total of 30 genotypes of Vigna subterranea were studied under tropical conditions at two sites over two planting seasons (considered as four environments). The experiment at each site used a randomized complete block design with three replicates. Data were collected on vegetative and yield component attributes. Based on analysis of variance, pooled results showed that there were positive and highly significant differences (p ≤ 0.01) among the 30 genotypes for all attributes studied. Highly significant and positive strong correlation at phenotypic level was observed for dry seed weight (0.856), hundred seed weight (0.754), fresh pod weight (0.789), and total pod weight (0.626) with yield in kg per hectare, while moderate positive correlations were observed for harvest cut (0.360) and days to maturity (0.356). However, a perfect positive correlation was observed for the dry weight of pods with seed yield. In contrast, days to 50% flowering (- 0.350) showed a negative significant relationship with yield per hectare. The dried pod weight attribute (1.00) had a high positive direct effect on yield. Fresh pod weight had the greatest indirect effect on yield per hectare, followed by the number of total pods by dry pod weight. As a result, dry pod weight, hundred seed weight, number of total pods, and fresh pod weight could be used as selection criteria to improve the seed yield of Bambara groundnut (Vigna subterranea).Entities:
Mesh:
Year: 2022 PMID: 34996953 PMCID: PMC8742022 DOI: 10.1038/s41598-021-03692-z
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
The thirty selected Bambara groundnut accession used in this study.
| Genotype | ID | Genotype | ID | Genotype | ID |
|---|---|---|---|---|---|
| Maik12-18 | S5G1 | GiiwP12-18 | S5G11 | GiiwP9-18 | S5G21 |
| MaikP3-18 | S5G2 | ExSokP4-18 | S5G12 | GiiwP11-18 | S5G22 |
| MaikP6-18 | S5G3 | KarP10-18 | S5G13 | KarP8-18 | S5G23 |
| BdilaP5-18 | S5G4 | MaikP11-18 | S5G14 | DunP6-18 | S5G24 |
| JataP1-18 | S5G5 | MaibP8-18 | S5G15 | GiiwP1-18 | S5G25 |
| DunP9-18 | S5G6 | MaibP6-18 | S5G16 | KataP5-18 | S5G26 |
| CancP3-18 | S5G7 | KataP8-18 | S5G17 | KarP9-18 | S5G27 |
| RokP1-18 | S5G8 | DunP2-18 | S5G18 | DunP8-18 | S5G28 |
| ExSokP5-18 | S5G9 | CancP2-18 | S5G19 | RokP9-18 | S5G29 |
| ExSokP3-18 | S5G10 | BdilaP8-18 | S5G20 | JataP3-18 | S5G30 |
Maik = Maikai; Bdila = Bildillali; Jata = Jatau; Dun = Duna; Canc = Cancaraki; Rok = Roko; Giiw = Giiwa; Kar = Karu; Maib = Maibergo; Kata = Katawa; Exsoko = Exsokoto.
Environmental description of the experimental site.
| Code | Season | Latitude | Longitude | Altitude | Av Temp | Av Hum (%) | Rainfall (mm) | Year |
|---|---|---|---|---|---|---|---|---|
| FTM (ENV 1) | Main | 2.990935 | 101.7138 | 61.0 m | 23.14–29.88 °C | 83.2 | 188.6 | 2020 |
| FTO (ENV 2) | Off | 2.990935 | 101.7138 | 61.0 m | 24.22–30.72 °C | 82.6 | 198.4 | 2021 |
| FFM (ENV 3) | Main | 2.983092 | 101.7152 | 54.0 m | 23.14–29.88 °C | 83.2 | 188.6 | 2020 |
| FFO (ENV 4) | Off | 2.983092 | 101.7152 | 54.0 m | 24.22–30.72 °C | 82.6 | 198.4 | 2021 |
FTM = Field ten main season; FTO = Field ten off season, FFM = Field fifteen main season; FFO = Field fifteen off season; ENV. = Environment; Main season = May- September; Off season = November–March; Av. Temp. = Average temperature; Av. Hum. = Average humidity. Sources: https://en.climate-data.org/asia/malaysia/selangor/mardi-serdang-971613/#climate-table.
Characterization of soil properties of the experimental region.
| Determination | Location | |
|---|---|---|
| Field fifteen (FF) | Field ten (FT) | |
| Physical analysis | Value | |
| Sand (%) | 40 | 5.8 |
| Silt (%) | 26.82 | 51.19 |
| Clay (%) | 33.74 | 42.99 |
| Textural classes (USDA) | Clay loam | Silty clay |
The mean squares and significant level of vegetative, yield, and its related traits revealed by ANOVA.
| Source of variation | Reps (Environment) | Environments (E) | Genotypes (G) | G × E | Error | CV (%) | St. Dev |
|---|---|---|---|---|---|---|---|
| df | 8 | 3 | 29 | 87 | 232 | ||
| D50%F | 170.93** | 606.94** | 124.08** | 32.67** | 5.11 | 14.09 | 5.49 |
| DTM | 186.58** | 177.29** | 265.12** | 74.60** | 10.46 | 5.43 | 7.2 |
| PH | 69.60** | 663.21** | 24.28** | 13.63** | 4.48 | 13.24 | 3.91 |
| NB | 122.61** | 1668.60** | 109.37** | 51.20** | 17.58 | 18.1 | 7.02 |
| BFW | 14,799.31** | 738,639.89** | 103,871.17** | 3875.17** | 420.23 | 27.96 | 126.9 |
| TNP | 1042.51** | 831.01** | 220.44** | 71.03** | 19.44 | 10.41 | 8.82 |
| FPW | 9959.17** | 428,488.77** | 19,117.35** | 6651.85** | 256.82 | 13.32 | 84.41 |
| DPW | 4697.92** | 191,292.95** | 6228.69** | 170.41* | 127.54 | 11.98 | 47.4 |
| DSW | 1918.50** | 75,582.15** | 4193.77** | 420.84** | 275.9 | 11.77 | 35.96 |
| HSW | 1886.90** | 216,273.59** | 1945.19** | 204.52** | 130.21 | 26.24 | 46.26 |
| HI | 11.65** | 424.48** | 403.52** | 4.28** | 2.16 | 10.01 | 6.23 |
| YLD | 166,448.32** | 6,423,330.79** | 220,685.25** | 6038.15* | 4519.1 | 11.98 | 282.13 |
df = degrees of freedom, St. Dev = standard deviation, CV = coefficient of variation, * = significant (p ≤ 0.05),** = highly significant (p ≤ 0.05), D50%F = days to 50% flowering, DTM = days to maturiity, PH = plant height (cm), NB = number of branches , BFW = biomass fresh weight (g), TNP = total number of pods, FWP = fresh pods weight (g), DPW = dry pods weight (g), DSW = dry seeds weight (g), HSW = hundred seed weight (g), HI = harvest index, and YLD = yield kg/ha.
Overall mean performance of vegetative, yield, and yield component traits of 30 V. subterranea genotypes across the environments.
| Traits | Location | |||||
|---|---|---|---|---|---|---|
| LTM | LTO | LFM | LFO | Mean | LSD | |
| D50%F | 37.02c ± 0.50 | 36.86c ± 0.47 | 39.58b ± 0.44 | 42.38a ± 0.68 | 38.96 | 0.66 |
| DTM | 133.86a ± 0.72 | 130.83c ± 0.64 | 132.60b ± 0.78 | 133.73a ± 0.85 | 132.75 | 0.95 |
| PH | 29.54b ± 0.23 | 25.64c ± 0.32 | 31.60a ± 0.41 | 31.19a ± 0.34 | 29.49 | 0.62 |
| NB | 38.00c ± 0.37 | 43.59a ± 0.70 | 33.33d ± 0.76 | 40.26b ± 0.61 | 38.79 | 1.23 |
| BFW | 373.30c ± 9.57 | 430.31b ± 12.85 | 583.87a ± 5.44 | 427.90b ± 12.60 | 453.85 | 6.02 |
| TNP | 85.08b ± 0.78 | 84.95b ± 1.07 | 80.64c ± 0.85 | 88.02a ± 0.82 | 84.67 | 1.29 |
| FPW | 565.89d ± 3.45 | 659.96b ± 9.84 | 590.48c ± 4.26 | 718.12a ± 5.66 | 633.61 | 4.7 |
| DPW | 373.89c ± 2.42 | 381.80b ± 3.15 | 364.52d ± 2.29 | 462.05a ± 3.44 | 395.57 | 3.31 |
| DSW | 296.38b ± 2.36 | 296.3b ± 3.0 | 281.6c ± 2.36 | 347.69a ± 3.09 | 305.49 | 4.87 |
| HSW | 238.68a ± 2.46 | 133.43d ± 1.47 | 141.18c ± 1.02 | 192.01b ± 2.38 | 176.32 | 3.35 |
| HI | 60.60c ± 0.63 | 61.6b ± 0.71 | 61.34b ± 0.57 | 65.44a ± 0.61 | 62.24 | 0.43 |
| YLD | 2225.55c ± 14.40 | 2272.66b ± 18.73 | 2169.82d ± 13.60 | 2750.33a ± 20.64 | 2354.59 | 19.74 |
LTM = Ladang ten (main season), LTO = Ladang ten (off season), LFM = Ladang fifteen (main season), LFO = Ladang fifteen (off season), LSD = least significant difference (p = 0.05). Within a row, values with different letters indicate that the traits performed differently in the environments evaluated with LSD test at p > 0.05. D50%F = days to 50% flowering, DTM = days to maturiity, PH = plant height (cm), NB = number of branches , BFW = biomass fresh weight (g), TNP = total number of pods, FWP = fresh pods weight (g), DPW = dry pods weight (g), DSW = dry seeds weight (g), HSW = hundred seed weight (g), HI = harvest index, and YLD = yield kg/ha.
Assessment of phenotypic correlation (above diagonal) and genotypic correlation (bellow diagonal) among 12 characters of V. subterranea genotypes.
| Variable | D50F | DTM | PH | NB | BFW | TNP | FPW | DPW | DSW | HSW | HI | Yld |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| D50F | 1 | 0.388** | − 0.241* | − 0.215* | 0.029 ns | − 0.475** | − 0.506** | − 0.544** | − 0.551** | − 0.432** | − 0.125 ns | − 0.544** |
| DTM | 0.214* | 1 | − 0.094 ns | 0.274** | − 0.079 ns | 0.151 ns | 0.313** | 0.395** | 0.434** | 0.499** | 0.168 ns | 0.395** |
| PH | − 0.038 ns | − 0.034 ns | 1 | 0.815** | 0.332** | 0.183 ns | 0.127 ns | − 0.048 ns | 0.058 ns | 0.268* | − 0.320** | − 0.048 ns |
| NB | 0.393** | − 0.036 ns | 0.299* | 1 | 0.414** | 0.264* | 0.236* | 0.168 ns | 0.085 ns | 0.206 ns | − 0.355** | 0.168 ns |
| BFW | 0.060 ns | − 0.076 ns | 0.269* | 0.172 ns | 1 | 0.080 ns | − 0.037 ns | − 0.162 ns | − 0.214* | − 0.252* | − 0.972** | − 0.162 ns |
| TNP | − 0.201* | 0.041 ns | 0.156 ns | 0.341** | 0.091 ns | 1 | 0.825** | 0.790** | 0.735** | 0.696** | 0.058 ns | 0.790** |
| FPW | − 0.387** | 0.223* | 0.086 ns | 0.075 ns | − 0.030 ns | 0.701** | 1 | 0.834** | 0.870** | 0.766** | 0.183 ns | 0.834** |
| DPW | − 0.360** | 0.366** | 0.042 ns | 0.095 ns | − 0.141 ns | 0.636** | 0.789** | 1 | 0.986** | 0.894** | 0.364** | 1.000** |
| DSW | − 0.315* | 0.313* | 0.116 ns | 0.176 ns | − 0.169 ns | 0.567** | 0.756** | 0.856** | 1 | 0.944** | 0.408** | 0.986** |
| HSW | − 0.283* | 0.404** | 0.126 ns | 0.096 ns | − 0.212* | 0.511** | 0.657** | 0.754** | 0.799** | 1 | 0.412** | 0.894** |
| HI | − 0.075 ns | 0.137 ns | − 0.235* | − 0.049 ns | − 0.958** | 0.069 ns | 0.187 ns | 0.360** | 0.363** | 0.363** | 1 | 0.364** |
| Yld | − 0.350** | 0.356** | 0.042 ns | 0.095 ns | − 0.141 ns | 0.626** | 0.789** | 1.000** | 0.856** | 0.754** | 0.360** | 1 |
* = Significant (p ≤ 0.05),** = Highly significant (p ≤ 0.05), ns = non significant (p > 0.05), D50%F = days to 50% flowering, DTM = days to maturiity, PH = plant height (cm), NB = Number of branches , BFW = biomass fresh weight (g), TNP = total number of pods, FWP = fresh pods weight (g), DPW = dry pods weight (g), DSW = dry seeds weight (g), HSW = hundred seed weight (g), HI = harvest index, and YLD = yield kg/ha.
Estimation of environmental correlation among 12 characters of V. subterranea genotypes.
| Variable | D50F | DTM | PH | NB | BFW | TNP | FPW | DPW | DSW | HSW | HI |
|---|---|---|---|---|---|---|---|---|---|---|---|
| D50F | 1 | ||||||||||
| DTM | − 0.024 ns | 1 | |||||||||
| PH | − 0.113 ns | − 0.092 ns | 1 | ||||||||
| NB | 0.186 ns | 0.185 ns | − 0.138 ns | 1 | |||||||
| BFW | − 0.108 ns | 0.104 ns | 0.013 ns | − 0.052 ns | 1 | ||||||
| TNP | − 0.122 ns | 0.125 ns | 0.020 ns | 0.131 ns | − 0.091 ns | 1 | |||||
| FPW | − 0.104 ns | − 0.031 ns | − 0.008 ns | − 0.094 ns | 0.009 ns | 0.216* | 1 | ||||
| DPW | − 0.204 ns | 0.014 ns | − 0.028 ns | − 0.142 ns | − 0.048 ns | 0.237* | 0.849** | 1 | |||
| DSW | − 0.076 ns | − 0.004 ns | 0.092 ns | 0.110 ns | − 0.005 ns | − 0.006 ns | 0.124 ns | 0.258* | 1 | ||
| HSW | − 0.014 ns | 0.149 ns | − 0.253* | 0.175 ns | − 0.010 ns | 0.096 ns | 0.188 ns | 0.246* | 0.360** | 1 | |
| HI | 0.077 ns | − 0.086 ns | − 0.101 ns | 0.076 ns | − 0.821** | 0.201 ns | 0.322** | 0.355** | 0.077 ns | 0.135 ns | 1 |
| Yld | − 0.204 ns | 0.014 ns | − 0.029 ns | − 0.142 ns | − 0.048 ns | 0.237* | 0.849** | 1.000** | 0.258* | 0.246* | 0.355** |
* = Significant (p ≤ 0.05),** = Highly significant (p ≤ 0.01), ns = non significant (p > 0.05), D50%F = days to 50% flowering, DTM = days to maturiity, PH = plant height (cm), NB = Number of branches , BFW = biomass fresh weight (g), TNP = total number of pods, FWP = fresh pods weight (g), DPW = dry pods weight (g), DSW = dry seeds weight (g), HSW = hundred seed weight (g), HI = harvest index, and YLD = yield kg/ha.
Figure 1Genotypic path coefficient diagram representing cause and effect relationships among quantitative traits and grain yield. Path diagram and coefficients of factors on the influence of first order on the second-order components and the latter on yield kg per hectare of V. subterranea genotypes. Here, P is the direct effects and r are the correlation coefficients. The single arrowed lines in the path diagram reflect direct effect, whereas the double arrowed lines reflect mutual connection. Note: 1 = Days to 50% flowering (D50%F); 2 = Days to maturity (DTM); 3 = Plant height (PH); 4 = Number of branches per plant (NB); 5 = Biomass fresh weight (BFW); 6 = Total number of pods per plant (TNP); 7 = Fresh pod weight per plant (FPW); 8 = Dry pod weight per plant (DPW); 9 = Dry seed weight per plant (DSW); 10 = Hundred seed weight (HSW); 11 = Harvest index (HI); 12 = Yield kg/hectare (YLD).
The direct (diagonal) and indirect effects of 11 characteristics on pod yield in 30 V. subterranea genotypes.
| Trait | D50F | DTM | PH | NB | BFW | TNP | FPW | DPW | DSW | HSW | HI |
|---|---|---|---|---|---|---|---|---|---|---|---|
| D50F | 0.0045 | − 0.0008 | 0.0082 | 0.0013 | − 0.0042 | − 0.0081 | − 0.0075 | − 0.0066 | − 0.0059 | − 0.0016 | |
| DTM | − 0.0046 | − | 0.0007 | 0.0008 | 0.0017 | − 0.0009 | − 0.0048 | − 0.0079 | − 0.0068 | − 0.0087 | − 0.0030 |
| PH | − 0.0001 | − 0.0001 | 0.0009 | 0.0008 | 0.0005 | 0.0003 | 0.0001 | 0.0003 | 0.0004 | − 0.0007 | |
| NB | − 0.0009 | 0.0001 | − 0.0007 | − | − 0.0004 | − 0.0008 | − 0.0002 | − 0.0002 | − 0.0004 | − 0.0002 | 0.0001 |
| BFW | 0.0019 | − 0.0025 | 0.0087 | 0.0055 | 0.0029 | − 0.0010 | − 0.0045 | − 0.0054 | − 0.0068 | − 0.0308 | |
| TNP | 0.0061 | − 0.0012 | − 0.0048 | − 0.0104 | − 0.0028 | − | − 0.0215 | − 0.0195 | − 0.0174 | − 0.0156 | − 0.0021 |
| FPW | − 0.0177 | 0.0102 | 0.0039 | 0.0034 | − 0.0014 | 0.0320 | 0.0360 | 0.0345 | 0.0300 | 0.0085 | |
| DPW | − 0.3603 | 0.3658 | 0.0420 | 0.0945 | − 0.1413 | 0.6358 | 0.7890 | 0.8657 | 0.7540 | 0.3601 | |
| DSW | 0.0168 | − 0.0167 | − 0.0062 | − 0.0094 | 0.0090 | − 0.0302 | − 0.0403 | − 0.0456 | − | − 0.0426 | − 0.0194 |
| HSW | − 0.0101 | 0.0144 | 0.0045 | 0.0034 | − 0.0075 | 0.0182 | 0.0234 | 0.0269 | 0.0285 | 0.0129 | |
| HI | − 0.0026 | 0.0048 | − 0.0083 | − 0.0017 | − 0.0336 | 0.0024 | 0.0066 | 0.0126 | 0.0127 | 0.0127 | |
Genotypic correlation with Yld | − 0.35** | 0.35** | 0.042 ns | 0.09 ns | − 0.14 ns | 0.62** | 0.78** | 0.99** | 0.85** | 0.75** | 0.36** |
D50%F = days to 50% flowering, DTM = days to maturiity, PH = plant height (cm), NB = number of branches , BFW = biomass fresh weight (g), TNP = total number of pods, FWP = fresh pods weight (g), DPW = dry pods weight (g), DSW = dry seeds weight (g), HSW = hundred seed weight (g), HI = harvest index, and YLD = yield kg/ha.
First order and second-order component relationships.
| Components | Traits | D50F | DTM | PH | NB | BFW |
|---|---|---|---|---|---|---|
| Total number of pods (TNP) | D50F | − | − 0.0947 | 0.0166 | − 0.1739 | − 0.0266 |
| DTM | 0.0336 | − 0.0054 | − 0.0057 | − 0.0120 | ||
| PH | 0.0009 | 0.0008 | − | − 0.0068 | − 0.0061 | |
| NB | 0.2041 | − 0.0188 | 0.1550 | 0.0893 | ||
| BFW | 0.0028 | − 0.0035 | 0.0124 | 0.0079 | ||
| TNP | − 0.2000 | 0.0408 | 0.1559 | 0.340** | 0.0905 | |
| Fresh pods weight (FPW) | D50F | − | − 0.1272 | 0.0223 | − 0.2334 | − 0.0357 |
| DTM | 0.0772 | − 0.0123 | − 0.0130 | − 0.0275 | ||
| PH | 0.0006 | 0.0006 | − | − 0.0051 | − 0.0046 | |
| NB | 0.1296 | − 0.0119 | 0.0984 | 0.0567 | ||
| BFW | − 0.0011 | 0.0014 | − 0.0050 | − 0.0032 | − | |
| FPW | − 0.3874 | 0.223* | 0.0863 | 0.0749 | − 0.0298 | |
| Dry pods weight (DPW) | D50F | − | − 0.1284 | 0.0225 | − 0.2356 | − 0.0361 |
| DTM | 0.1043 | − 0.0166 | − 0.0176 | − 0.0372 | ||
| PH | 0.0017 | 0.0015 | − | − 0.0135 | − 0.0122 | |
| NB | 0.1502 | − 0.0138 | 0.1141 | 0.0657 | ||
| BFW | − 0.0073 | 0.0093 | − 0.0327 | − 0.0209 | − | |
| DPW | − 0.3503 | 0.3558 | 0.0420 | 0.0945 | − 0.1412 | |
| Dry seeds weight (DSW) | D50F | − | − 0.1219 | 0.0214 | − 0.2237 | − 0.0343 |
| DTM | 0.0938 | − 0.0149 | − 0.0158 | − 0.0334 | ||
| PH | − 0.0011 | − 0.0010 | 0.0084 | 0.0076 | ||
| NB | 0.1723 | − 0.0159 | 0.1309 | 0.0754 | ||
| BFW | − 0.0111 | 0.0141 | − 0.0495 | − 0.0317 | − | |
| DSW | − 0.3150 | 0.3131 | 0.1159 | 0.1756 | − 0.1688 | |
| Hundred seeds weight (HSW) | D50F | − | − 0.1076 | 0.0189 | − 0.1975 | − 0.0303 |
| DTM | 0.1090 | − 0.0174 | − 0.0184 | − 0.0389 | ||
| PH | − 0.0033 | − 0.0030 | 0.0259 | 0.0234 | ||
| NB | 0.1274 | − 0.0117 | 0.0968 | 0.0558 | ||
| BFW | − 0.0133 | 0.0169 | − 0.0596 | − 0.0381 | − | |
| HSW | − 0.2827 | 0.4034 | 0.1256 | 0.0960 | − 0.2116 | |
| Harvest index (HI) | D50F | − | − 0.0222 | 0.0039 | − 0.0407 | − 0.0062 |
| DTM | 0.0193 | − 0.0031 | − 0.0033 | − 0.0069 | ||
| PH | 0.0010 | 0.0009 | − | − 0.0080 | − 0.0072 | |
| NB | 0.0667 | − 0.0061 | 0.0507 | 0.0292 | ||
| BFW | − 0.0582 | 0.0739 | − 0.2602 | − 0.1663 | − | |
| HI | − 0.0748 | 0.1367 | − 0.2353 | − 0.0485 | − 0.9582 |
D50%F = days to 50% flowering, DTM = days to maturiity, PH = plant height (cm), NB = number of branches, BFW = biomass fresh weight (g).
Second-order components’ effects on yield.
| Trait | TNP | FPW | DPW | DSW | HSW | HI |
|---|---|---|---|---|---|---|
| TNP | 0.001 | 0.001 | 0.001 | 0.001 | 0.000 | |
| FPW | 0.005 | 0.006 | 0.006 | 0.005 | 0.001 | |
| DPW | 0.580 | 0.789 | 0.856 | 0.754 | 0.360 | |
| DSW | − 0.006 | − 0.009 | − 0.010 | − | − 0.009 | − 0.004 |
| HSW | 0.002 | 0.003 | 0.003 | 0.004 | 0.002 | |
| HI | 0.040 | 0.000 | − 0.001 | − 0.001 | − 0.001 | − |
| Yld | 0.62** | 0.79** | 0.99** | 0.85** | 0.75** | 0.36** |
TNP = total number of pods, FWP = fresh pods weight (g), DPW = dry pods weight (g), DSW = dry seeds weight (g), HSW = hundred seed weight (g), HI = harvest index, and YLD = yield kg/ha.