| Literature DB >> 34992687 |
Tingting Liu1, Shuangshuang Xu2, Xiaoxin Liu3.
Abstract
Non-small cell lung cancer (NSCLC) remains the most frequent malignancy worldwide, and lung adenocarcinoma (LUAD) and lung squamous cell carcinoma (LUSC) represent two major subtypes. LINC00628 has been demonstrated to promote LUAD progression; however, its clinical role in NSCLC remains elusive. The aim of the present study was to analyze the expression of long intergenic non-protein coding RNA 628 (LINC00628) in NSCLC, including in the LUAD and LUSC subtypes. In addition, its roles in NSCLC development and prognosis were also examined. Data from The Cancer Genome Atlas (TCGA) database were first used to assess the expression and prognostic potential in both LUAD and LUSC, then LINC00628 expression in 128 NSCLC tissues was measured using reverse transcription-quantitative PCR. A receiver operating characteristic curve was used to assess the ability of LINC00628 to discriminate between patients with LUAD and LUSC. Kaplan-Meier curves were used to analyze the relationship between LINC00628 expression and the overall survival of patients. Cox regression analysis was used to explore the potential prognostic factors that might be independently associated with NSCLC overall survival. Both in silico and tissue analysis data indicated that the expression of LINC00628 was significantly upregulated in NSCLC tissue compared with matched normal controls (P<0.001). LINC00628 expression levels were also significantly higher in LUAD cases than in patients with LUSC (P<0.001). In addition, LINC00628 could discriminate LUAD from LUSC cases. The expression of LINC00628 was significantly associated with tumor size (P=0.013), histological type (P=0.009), lymph node metastasis (P=0.021) and TNM stage (P=0.008). Survival analysis based on data from both TCGA and patients included in the present study identified an association between LINC00628 and overall survival in LUAD, but this relationship was not observed in LUSC for TCGA data. Cox regression analysis demonstrated that high LINC00628 expression was associated with poor overall survival in patients with LUAD (P=0.001), but not in patients with LUSC (P=0.088). In conclusion, LINC00628 expression was upregulated in NSCLC and associated with patient prognosis. Patients with LUAD had higher LINC00628 expression levels than those with LUSC, and increased LINC00628 served as an independent prognostic factor in LUAD, but not LUSC. Copyright: © Liu et al.Entities:
Keywords: LINC00628; lung adenocarcinoma; lung squamous cell carcinoma; overall survival; prognosis
Year: 2021 PMID: 34992687 PMCID: PMC8721862 DOI: 10.3892/ol.2021.13173
Source DB: PubMed Journal: Oncol Lett ISSN: 1792-1074 Impact factor: 2.967
Figure 1.Bioinformatics analysis of LINC00628 expression and its association with overall survival in non-small cell lung cancer. (A) Expression of LINC00628 in LUAD and normal samples (mean, 0.11 vs. 0.02, respectively; P=2.8×10−22). (B) Relationship between LINC00628 expression and overall survival of patients with LUAD (log-rank P=5×10−4; HR=1.7). (C) Expression of LINC00628 in LUSC and normal samples (mean, 0.06 vs. 0.02, respectively; P=2.1×10−5). (D) Relationship between LINC00628 expression and overall survival of patients with LUSC (log-rank P=0.11; HR=1.3). LINC00628, long intergenic non-protein coding RNA 628; LUAD, lung adenocarcinoma; LUSC, lung squamous cell carcinoma; HR, hazard ratio.
Figure 2.Upregulation of LINC00628 in LUAD and LUSC tumor tissue. (A) Relative expression of LINC00628 in NSCLC tumor and adjacent normal tissue samples (mean, 0.99 vs. 0.46, respectively; ***P<0.001 vs. Controls). (B) Relative expression of LINC00628 in LUAD and LUSC tumors, compared with adjacent normal tissue samples (LUAD, mean, 1.11 vs. 0.51, respectively, ***P<0.001 vs. Controls; LUSC, mean, 0.84 vs. 0.41, respectively, ***P<0.001 vs. Controls). (C) Relative expression of LINC00628 in patients with LUAD compared with patients with LUSC (mean, 1.11 vs. 0.84, respectively; P<0.001). ###P<0. vs. LUAD. (D) LINC00628 expression can discriminate between LUAD and LUSC (AUC=0.861). LINC00628, long intergenic non-protein coding RNA 628; LUAD, lung adenocarcinoma; LUSC, lung squamous cell carcinoma; NSCLC, non-small cell lung cancer; AUC, area under the curve.
Relationship between LINC00628 expression and the clinicopathological characteristics of patients with non-small cell lung cancer.
| LINC00628 expression | ||||
|---|---|---|---|---|
|
| ||||
| Variables | Total (n=128) | Low (n=62) | High (n=66) | P-value[ |
| Age, years | 0.656 | |||
| ≤60 | 45 | 23 | 22 | |
| >60 | 83 | 39 | 44 | |
| Sex | 0.809 | |||
| Female | 53 | 25 | 28 | |
| Male | 75 | 37 | 38 | |
| Smoking | 0.633 | |||
| No | 53 | 27 | 26 | |
| Yes | 75 | 35 | 40 | |
| Tumor size, cm | 0.013 | |||
| ≤3 | 66 | 39 | 27 | |
| >3 | 62 | 23 | 39 | |
| Histological type | 0.009 | |||
| LUAD | 73 | 28 | 45 | |
| LUSC | 55 | 34 | 21 | |
| Lymph node metastasis | 0.021 | |||
| Negative | 65 | 38 | 27 | |
| Positive | 63 | 24 | 39 | |
| TNM stage | 0.008 | |||
| I–II | 59 | 36 | 23 | |
| III–IV | 69 | 26 | 43 | |
High vs. low groups. LINC00628, long intergenic non-protein coding RNA 628; LUAD, lung adenocarcinoma; LUSC, lung squamous cell carcinoma; TNM, tumor-node-metastasis.
Figure 3.Association between LINC00628 expression and overall survival in patients with NSCLC. (A) High LINC00628 is associated with worse overall survival in all patients with NSCLC (log-rank P=0.005). (B and C) High LINC00628 expression was associated with worse overall survival in (B) patients with LUAD (log-rank P=0.028) and (C) patients with LUSC (log-rank P=0.042). LINC00628, long intergenic non-protein coding RNA 628; LUAD, lung adenocarcinoma; LUSC, lung squamous cell carcinoma; NSCLC, non-small cell lung cancer.
Cox regression analysis in patients with non-small cell lung cancer.
| A, Univariate analysis | |||
|---|---|---|---|
|
| |||
| Variables | HR | 95% CI | P-value |
| Age | 1.139 | 0.831-1.556 | 0.293 |
| Sex | 1.214 | 0.794-1.809 | 0.302 |
| Smoking | 1.148 | 0.851-1.667 | 0.227 |
| Tumor size | 1.409 | 0.965-1.973 | 0.089 |
| Histological type | 1.132 | 0.921-1.480 | 0.298 |
| Lymph node metastasis | 1.508 | 1.085-2.167 | 0.047 |
| TNM stage | 2.541 | 1.883-3.496 | 0.003 |
| LINC00628 expression | 2.887 | 1.973-4.243 | 0.002 |
|
| |||
|
| |||
|
| |||
|
|
|
|
|
|
| |||
| Age | 1.115 | 0.821-1.435 | 0.334 |
| Sex | 1.261 | 0.854-1.896 | 0.289 |
| Smoking | 1.124 | 0.864-1.593 | 0.255 |
| Tumor size | 1.313 | 0.942-1.574 | 0.192 |
| Histological type | 1.102 | 0.929-1.382 | 0.283 |
| Lymph node metastasis | 1.415 | 0.993-1.991 | 0.066 |
| TNM stage | 2.139 | 1.527-2.896 | 0.008 |
| LINC00628 expression | 2.161 | 1.452-3.051 | 0.005 |
LINC00628, long intergenic non-protein coding RNA 628; TNM, tumor-node-metastasis; HR, hazard ratio; CI, confidence interval.
Cox regression analysis for patients with lung adenocarcinoma.
| A, Univariate analysis | |||
|---|---|---|---|
|
| |||
| Variables | HR | 95% CI | P-value |
| Age | 1.331 | 0.727-1.992 | 0.398 |
| Sex | 1.454 | 0.713-2.348 | 0.551 |
| Smoking | 1.278 | 0.749-1.873 | 0.412 |
| Tumor size | 1.496 | 0.888-2.256 | 0.072 |
| Lymph node metastasis | 1.583 | 1.185-2.354 | 0.037 |
| TNM stage | 2.639 | 1.798-4.551 | 0.002 |
| LINC00628 expression | 2.949 | 1.982-5.173 | <0.001 |
|
| |||
|
| |||
|
| |||
|
|
|
|
|
|
| |||
| Age | 1.302 | 0.716-1.647 | 0.549 |
| Sex | 1.465 | 0.730-2.232 | 0.672 |
| Smoking | 1.272 | 0.746-1.808 | 0.456 |
| Tumor size | 1.464 | 0.871-2.193 | 0.108 |
| Lymph node metastasis | 1.532 | 1.035-2.159 | 0.047 |
| TNM stage | 2.222 | 1.533-2.935 | 0.006 |
| LINC00628 expression | 2.437 | 1.551-3.496 | 0.001 |
LINC00628, long intergenic non-protein coding RNA 628; TNM, tumor-node-metastasis; HR, hazard ratio; CI, confidence interval.
Cox regression analysis for patients with lung squamous cell carcinoma.
| A, Univariate analysis | |||
|---|---|---|---|
|
| |||
| Variables | HR | 95% CI | P-value |
| Age | 1.158 | 0.781-1.683 | 0.342 |
| Sex | 1.504 | 0.803-2.374 | 0.261 |
| Smoking | 1.257 | 0.668-1.986 | 0.552 |
| Tumor size | 1.334 | 0.923-1.894 | 0.094 |
| Lymph node metastasis | 1.523 | 0.982-2.180 | 0.061 |
| TNM stage | 2.473 | 1.652-3.385 | 0.008 |
| LINC00628 expression | 1.998 | 0.986-3.165 | 0.052 |
|
| |||
|
| |||
|
| |||
| Variables | HR | 95% CI | P-value |
| Age | 1.126 | 0.776-1.676 | 0.354 |
| Sex | 1.445 | 0.790-2.201 | 0.277 |
| Smoking | 1.263 | 0.675-1.955 | 0.531 |
| Tumor size | 1.265 | 0.879-1.746 | 0.179 |
| Lymph node metastasis | 1.408 | 0.961-2.052 | 0.074 |
| TNM stage | 2.201 | 1.417-3.071 | 0.013 |
| LINC00628 expression | 1.896 | 0.952-2.886 | 0.088 |
LINC00628, long intergenic non-protein coding RNA 628; TNM, tumor-node-metastasis; HR, hazard ratio; CI, confidence interval.