Literature DB >> 34984672

Common functional connectivity alterations in focal epilepsies identified by machine learning.

Taha Gholipour1,2,3, Xiaozhen You2, Steven M Stufflebeam3, Murray Loew4, Mohamad Z Koubeissi1, Victoria L Morgan5, William D Gaillard1,2.   

Abstract

OBJECTIVE: This study was undertaken to identify shared functional network characteristics among focal epilepsies of different etiologies, to distinguish epilepsy patients from controls, and to lateralize seizure focus using functional connectivity (FC) measures derived from resting state functional magnetic resonance imaging (MRI).
METHODS: Data were taken from 103 adult and 65 pediatric focal epilepsy patients (with or without lesion on MRI) and 109 controls across four epilepsy centers. We used three whole-brain FC measures: parcelwise connectivity matrix, mean FC, and degree of FC. We trained support vector machine models with fivefold cross-validation (1) to distinguish patients from controls and (2) to lateralize the hemisphere of seizure onset in patients. We reported the regions and connections with the highest importance from each model as the common FC differences between the compared groups.
RESULTS: FC measures related to the default mode and limbic networks had higher importance relative to other networks for distinguishing epilepsy patients from controls. In lateralization models, regions related to somatosensory, visual, default mode, and basal ganglia showed higher importance. The epilepsy versus control classification model trained using a 400-parcel connectivity matrix achieved a median testing accuracy of 75.6% (median area under the curve [AUC] = .83) in repeated independent testing. Lateralization accuracy using the 400-parcel connectivity matrix reached a median accuracy of 64.0% (median AUC = .69). SIGNIFICANCE: Machine learning models revealed common FC alterations in a heterogeneous group of patients with focal epilepsies. The distribution of the most altered regions supports the hypothesis that shared functional alteration exists beyond the seizure onset zone and its epileptic network. We showed that FC measures can distinguish patients from controls, and further lateralize focal epilepsies. Future studies are needed to confirm these findings by using larger numbers of epilepsy patients.
© 2022 International League Against Epilepsy.

Entities:  

Keywords:  functional MRI; lateralization; support vector machine; temporal lobe epilepsy

Mesh:

Year:  2022        PMID: 34984672      PMCID: PMC9022014          DOI: 10.1111/epi.17160

Source DB:  PubMed          Journal:  Epilepsia        ISSN: 0013-9580            Impact factor:   6.740


  51 in total

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Journal:  Cereb Cortex       Date:  2004-01       Impact factor: 5.357

2.  Using Low-Frequency Oscillations to Detect Temporal Lobe Epilepsy with Machine Learning.

Authors:  Gyujoon Hwang; Veena A Nair; Jed Mathis; Cole J Cook; Rosaleena Mohanty; Gengyan Zhao; Neelima Tellapragada; Candida Ustine; Onyekachi O Nwoke; Charlene Rivera-Bonet; Megan Rozman; Linda Allen; Courtney Forseth; Dace N Almane; Peter Kraegel; Andrew Nencka; Elizabeth Felton; Aaron F Struck; Rasmus Birn; Rama Maganti; Lisa L Conant; Colin J Humphries; Bruce Hermann; Manoj Raghavan; Edgar A DeYoe; Jeffrey R Binder; Elizabeth Meyerand; Vivek Prabhakaran
Journal:  Brain Connect       Date:  2019-03

3.  Lateralization and localization of epilepsy related hemodynamic foci using presurgical fMRI.

Authors:  Clara Huishi Zhang; Yunfeng Lu; Benjamin Brinkmann; Kirk Welker; Gregory Worrell; Bin He
Journal:  Clin Neurophysiol       Date:  2014-04-30       Impact factor: 3.708

4.  Functional connectome contractions in temporal lobe epilepsy: Microstructural underpinnings and predictors of surgical outcome.

Authors:  Sara Larivière; Yifei Weng; Reinder Vos de Wael; Jessica Royer; Birgit Frauscher; Zhengge Wang; Andrea Bernasconi; Neda Bernasconi; Dewi V Schrader; Zhiqiang Zhang; Boris C Bernhardt
Journal:  Epilepsia       Date:  2020-05-26       Impact factor: 5.864

5.  Temporal variability profiling of the default mode across epilepsy subtypes.

Authors:  Siqi Yang; Zhiqiang Zhang; Huafu Chen; Yao Meng; Jiao Li; Zehan Li; Qiang Xu; Qirui Zhang; Yun-Shuang Fan; Guangming Lu; Wei Liao
Journal:  Epilepsia       Date:  2020-11-25       Impact factor: 5.864

6.  Proportional thresholding in resting-state fMRI functional connectivity networks and consequences for patient-control connectome studies: Issues and recommendations.

Authors:  Martijn P van den Heuvel; Siemon C de Lange; Andrew Zalesky; Caio Seguin; B T Thomas Yeo; Ruben Schmidt
Journal:  Neuroimage       Date:  2017-02-03       Impact factor: 6.556

Review 7.  Network neuroscience.

Authors:  Danielle S Bassett; Olaf Sporns
Journal:  Nat Neurosci       Date:  2017-02-23       Impact factor: 24.884

8.  Pattern classification of large-scale functional brain networks: identification of informative neuroimaging markers for epilepsy.

Authors:  Jie Zhang; Wei Cheng; ZhengGe Wang; ZhiQiang Zhang; WenLian Lu; GuangMing Lu; Jianfeng Feng
Journal:  PLoS One       Date:  2012-05-17       Impact factor: 3.240

9.  Large-scale brain networks are distinctly affected in right and left mesial temporal lobe epilepsy.

Authors:  Brunno Machado de Campos; Ana Carolina Coan; Clarissa Lin Yasuda; Raphael Fernandes Casseb; Fernando Cendes
Journal:  Hum Brain Mapp       Date:  2016-05-02       Impact factor: 5.038

10.  Learning to see the invisible: A data-driven approach to finding the underlying patterns of abnormality in visually normal brain magnetic resonance images in patients with temporal lobe epilepsy.

Authors:  Oscar F Bennett; Baris Kanber; Chandrashekar Hoskote; M Jorge Cardoso; Sebastien Ourselin; John S Duncan; Gavin P Winston
Journal:  Epilepsia       Date:  2019-11-06       Impact factor: 5.864

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  2 in total

Review 1.  The Temporal Lobe as a Symptomatogenic Zone in Medial Parietal Lobe Epilepsy.

Authors:  Nadim Jaafar; Amar Bhatt; Alexandra Eid; Mohamad Z Koubeissi
Journal:  Front Neurol       Date:  2022-03-15       Impact factor: 4.003

Review 2.  Simultaneous electroencephalography-functional magnetic resonance imaging for assessment of human brain function.

Authors:  Elias Ebrahimzadeh; Saber Saharkhiz; Lila Rajabion; Homayoun Baghaei Oskouei; Masoud Seraji; Farahnaz Fayaz; Sarah Saliminia; Seyyed Mostafa Sadjadi; Hamid Soltanian-Zadeh
Journal:  Front Syst Neurosci       Date:  2022-07-28
  2 in total

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