| Literature DB >> 34982256 |
Linhua Zhou1, Xinmiao Rong2,3, Meng Fan4, Liu Yang2, Huidi Chu2, Ling Xue3, Guorong Hu2, Siyu Liu5, Zhijun Zeng2, Ming Chen6, Wei Sun1, Jiamin Liu7, Yawen Liu5, Shishen Wang8, Huaiping Zhu9.
Abstract
The spread of COVID-19 in Wuhan was successfully curbed under the strategy of "Joint Prevention and Control Mechanism." To understand how this measure stopped the epidemics in Wuhan, we establish a compartmental model with time-varying parameters over different stages. In the early stage of the epidemic, due to resource limitations, the number of daily reported cases may lower than the actual number. We employ a dynamic-based approach to calibrate the accumulated clinically diagnosed data with a sudden jump on February 12 and 13. The model simulation shows reasonably good match with the adjusted data which allows the prediction of the cumulative confirmed cases. Numerical results reveal that the "Joint Prevention and Control Mechanism" played a significant role on the containment of COVID-19. The spread of COVID-19 cannot be inhibited if any of the measures was not effectively implemented. Our analysis also illustrates that the Fangcang Shelter Hospitals are very helpful when the beds in the designated hospitals are insufficient. Comprised with Fangcang Shelter Hospitals, the designated hospitals can contain the transmission of COVID-19 more effectively. Our findings suggest that the combined multiple measures are essential to curb an ongoing epidemic if the prevention and control measures can be fully implemented.Entities:
Keywords: COVID-19; Data calibration; Dynamical approach; Fangcang Shelter Hospital; Joint prevention and control mechanism; Modeling with stages
Mesh:
Year: 2022 PMID: 34982256 PMCID: PMC8724762 DOI: 10.1007/s11538-021-00983-4
Source DB: PubMed Journal: Bull Math Biol ISSN: 0092-8240 Impact factor: 1.758
Fig. 1Daily reported data of new confirmed cases, cumulative death, and cumulative recovery of COVID-19 in Wuhan from January 23 to February 25. The daily reported data of new confirmed cases prior to the “sudden jump” on February 12 is to be calibrated. Data source: Prevention and Control Dynamics, Xinhuanet (2020)
Fig. 2Cumulative number of hospital beds in DHs and FSHs from January 23 to February 25 in Wuhan
Fig. 3Flow diagram of the transmission of COVID-19
Variables and their descriptions, initial values, and sources
| Variable | Descriptions | Initial values | Source |
|---|---|---|---|
| Number of susceptible |
People’s Network ( | ||
| Number of close contact | 1302 | Estimated | |
| Number of uninfected under home quarantine | 0 | Calculated Yang et al. ( | |
| Number of asymptomatic infectious under home quarantine (who will never develop symptoms) | 16 |
Yang et al. ( | |
| Number of infectious with mild symptoms under home quarantine | 245 |
Yang et al. ( | |
| Number of infectious with severe symptoms under home quarantine | 89 |
Yang et al. ( | |
| Number of infectious in Designated Hospitals | 30 | Calculated Yang et al. ( | |
| Number of infectious in Fangcang Shelter Hospitals | 0 | Assumed | |
| Number of recovered | 28 | Calculated Health Commission of Hubei Province ( | |
| Number of death due to COVID-19 | 17 |
Health Commission of Hubei Province ( |
Parameters and their descriptions, values, and sources
| Parameter | Descriptions | Unit | Range | Values | Source |
|---|---|---|---|---|---|
| Probability of showing symptoms for an infectious | – | [0, 1] | 0.955 |
Yang et al. ( | |
| Probability of showing severe symptoms for an infectious with symptoms | – | [0, 1] | 0.267 |
Yang et al. ( | |
| Quarantine period of uninfected under home quarantine | Day | – | 10 |
National Health Commission of the People’s Republic of China ( | |
| Observation period of close contact | Day | – | 4 |
Health Commission of Hubei Province ( | |
| Infection rate of susceptible by infectious per contact | – | [0, 1] | Stage I: 0.32473 Stage II: 0.28701 Stage III: 0.13949 Stage IV: 0.082469 | Estimated | |
| Recovery rate of infectious in Designated Hospitals | – | [0, 1] | Stage I: 0.010686 Stage II: 0.013695 Stage III: 0.011984 Stage IV: 0.023859 | Estimated | |
| Recovery rate of infectious in Fangcang Shelter Hospitals | – | [0, 1] | Stage I: 0.014249 Stage II: 0.018261 Stage III: 0.015978 Stage IV: 0.031813 | Estimated | |
| Recovery rate of asymptomatic infectious under home quarantine | – | [0, 1] | Stage I: 0.021372 Stage II: 0.027378 Stage III: 0.023953 Stage IV: 0.047722 | Estimated | |
| Death rate of infectious in Designated Hospitals | – | [0, 1] | Stage I: 0.021325 Stage II: 0.007012 Stage III: 0.004901 Stage IV: 0.004705 | Estimated | |
| Effective contact number of people who have close contact with an asymptomatic infectious per unit time | Person | [1, 10] | Stage I: 5; Stage II, III: 2; Stage IV: 1 | Assumed | |
| Effective contact number of people who have close contact with an infectious with mild symptoms per unit time | Person | [1, 5] | Stage I: 3; Stage II, III, IV: 1 | Assumed | |
| Effective contact number of people who have close contact with an infectious with severe symptoms per unit time | Person | [0, 3] | Stage I: 2; Stage II, III, IV: 1 | Assumed | |
| Tracing rate of asymptomatic infectious | – | [0, 1] | Stage I: 0.2; Stage II: 0.8; Stage III, IV: 1 |
The Central People’s Government of China ( | |
| Tracing rate of infectious with mild symptoms | – | [0, 1] | Stage I: 0.2; Stage II: 0.8; Stage III, IV: 1 |
The Central People’s Government of China ( | |
| Tracing rate of infectious with severe symptoms | – | [0, 1] | Stage I: 0.5; Stage II: 0.8; Stage III, IV: 1 |
The Central People’s Government of China ( |
Calibrated data of daily new infected cases
| Date | January 23 | January 24 | January 25 | January 26 | January 27 |
| Reported Cases | 70 | 77 | 46 | 80 | 892 |
| Calibrated Cases | 151 | 182 | 177 | 243 | 1094 |
| Date | January 28 | January 29 | January 30 | January 31 | February 1 |
| Reported Cases | 315 | 356 | 378 | 576 | 894 |
| Calibrated Cases | 565 | 665 | 760 | 1049 | 1479 |
| Date | February 2 | February 3 | February 4 | February 5 | February 6 |
| Reported Cases | 1033 | 1242 | 1967 | 1766 | 1501 |
| Calibrated Cases | 1757 | 2137 | 3050 | 2841 | 2552 |
| Date | February 7 | February 8 | February 9 | February 10 | February 11 |
| Reported Cases | 1985 | 1379 | 1921 | 1552 | 1104 |
| Calibrated Cases | 3006 | 2369 | 2880 | 2481 | 2003 |
| Date | February 12 | February 13 | |||
| Reported Cases | 1201 | 1201 | |||
| Calibrated Cases | 2071 | 2043 |
Fig. 4Calibration of under-reported data of daily new infected cases in Wuhan from January 23 to February 13. a Reported number of daily new confirmed cases by RNA test and the best fitted curve. b Calibrated data of daily new infected cases shown by the solid black curve with “o”
Fig. 5Comparisons of model outputs, R(t), and D(t) with the daily data. The best fitted curves indicate that our predictions well match the calibrated data of cumulative confirmed cases (a and Fig. 4), and the reported data of cumulative death and cumulative recovery (b–c and Fig. 1) from January 23 to February 25. The validation of the estimation (see the blue solid curve and the green dots in a) from February 26 to March 10 also shows that the parameterized model makes a perfect predication. Here, the data of green dots is the cumulative confirmed cases reported by WMHC (Prevention and Control Dynamics, Xinhuanet 2020) (Color figure online)
Fig. 6Comparisons of model outputs H(t) and M(t) with the actual number of available hospital beds in designated hospitals and Fangcang Shelter Hospitals
Fig. 7Comparison of cumulative confirmed cases under different hypothetical control scenarios. It reveals that the DH of “Huoshenshan” and “Leishenshan,” and the FSH, have a great impact on the containment of COVID-19 in Wuhan
Fig. 8Sensitivity analysis of hospital bed capacity on COVID-19 in Wuhan. The numbers of available beds in both DH and FSH are changed by varying parameter , while other parameters are the same as those in Fig. 5
Fig. 9Sensitivity analysis of home quarantine on the containment of COVID-19 in Wuhan in terms of , , and . The values of , , and are changed by adjusting parameter , while other parameters are the same as those in Fig. 5
Fig. 10Sensitivity analysis of home quarantine under different hypothetical scenarios of hospital bed capacity in Wuhan in terms of , , and . The values of , , and , , are changed by adjusting parameters and , respectively, while other parameters are the same as those in Fig. 5
Fig. 11Comparisons of cumulative confirmed cases under different hypothetical scenarios of home quarantine efficiency and hospital bed capacity in Wuhan. The values of , , and , , are changed by varying parameters , and , respectively, while others are the same as those in Fig. 5
Fig. 12Sensitivity analysis of tracing efficiency in Stage I (i.e., from January 23 to February 4) on the containment of COVID-19 in Wuhan. The values of , , and in Stage I are changed by adjusting parameter , while other parameters are the same as those in Fig. 5
Fig. 13Sensitivity analysis of tracing efficiency in Stage II (i.e., from February 5 to February 12) on the containment of COVID-19 in Wuhan. The values of , , and in Stage II are changed by adjusting parameter , while other parameters are the same as those in Fig. 5