Literature DB >> 34982239

Buttiauxella massiliensis sp. nov., Isolated from a Human Bone Infection.

Rita Zgheib1,2, Issam Hasni2,3, Babacar Mbaye2,3, Hussein Anani1,2, Gabriel Haddad2,3, Nicholas Armstrong2, Céline Chartier2, Aurélia Caputo2,3, Didier Raoult2,3,4, Florence Fenollar1,2, Pierre-Edouard Fournier5,6.   

Abstract

Strain Marseille-P9829 was isolated from a bone sample collected from an open right fibula fracture from a 46-years old patient. Strain Marseille-P9829 (= CSUR P9829 = DSM 110695) was a Gram-negative, non-spore-forming and non-motile bacterium. This strain had a positive catalase activity but was oxidase-negative. The major fatty acids methyl esters were hexadecanoic acid (45.6%) and 9-hexadecenoic acid (28.4%). Matrix Assisted Laser Desorption/Ionization-Time of Flight Mass Spectrometry analysis suggested that this strain belongs to the species Buttiauxella gaviniae. Since there were few reports of clinical infections with this species in humans, whole genome sequencing was performed and a polyphasic taxono-genomic approach was followed in order to verify the classification of strain Marseille-P9829. The 16S rRNA gene sequence BLAST against the NCBI database yielded the highest similarity of 99.8% with Buttiauxella agrestis, suggesting that strain Marseille-P9829 belongs to this species. However, genomic comparison by digital DNA-DNA hybridization showed that values between strain Marseille-P9829 and other validly published Buttiauxella species were all lower than 70%. Furthermore, all average nucleotide identities were lower than 95-96%. Therefore, these results confirmed that strain Marseille-P9829 belonged to a new Buttiauxella species for which we propose the name Buttiauxella massiliensis sp. nov., with strain Marseille-P9829 as type strain.
© 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

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Year:  2022        PMID: 34982239     DOI: 10.1007/s00284-021-02714-3

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  16 in total

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Authors:  Dean Laslett; Bjorn Canback
Journal:  Nucleic Acids Res       Date:  2004-01-02       Impact factor: 16.971

2.  SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.

Authors:  Anton Bankevich; Sergey Nurk; Dmitry Antipov; Alexey A Gurevich; Mikhail Dvorkin; Alexander S Kulikov; Valery M Lesin; Sergey I Nikolenko; Son Pham; Andrey D Prjibelski; Alexey V Pyshkin; Alexander V Sirotkin; Nikolay Vyahhi; Glenn Tesler; Max A Alekseyev; Pavel A Pevzner
Journal:  J Comput Biol       Date:  2012-04-16       Impact factor: 1.479

3.  Prokka: rapid prokaryotic genome annotation.

Authors:  Torsten Seemann
Journal:  Bioinformatics       Date:  2014-03-18       Impact factor: 6.937

4.  Emended description of Buttiauxella agrestis with recognition of six new species of Buttiauxella and two new species of Kluyvera: Buttiauxella ferragutiae sp. nov., Buttiauxella gaviniae sp. nov., Buttiauxella brennerae sp. nov., Buttiauxella izardii sp. nov., Buttiauxella noackiae sp. nov., Buttiauxella warmboldiae sp. nov., Kluyvera cochleae sp. nov., and Kluyvera georgiana sp. nov.

Authors:  H E Müller; D J Brenner; G R Fanning; P A Grimont; P Kämpfer
Journal:  Int J Syst Bacteriol       Date:  1996-01

5.  Prodigal: prokaryotic gene recognition and translation initiation site identification.

Authors:  Doug Hyatt; Gwo-Liang Chen; Philip F Locascio; Miriam L Land; Frank W Larimer; Loren J Hauser
Journal:  BMC Bioinformatics       Date:  2010-03-08       Impact factor: 3.169

6.  Isolation of Buttiauxella gaviniae from a spinal cord patient with urinary bladder pathology.

Authors:  Thierry De Baere; Georges Wauters; Peter Kämpfer; Caroline Labit; Geert Claeys; Gerda Verschraegen; Mario Vaneechoutte
Journal:  J Clin Microbiol       Date:  2002-10       Impact factor: 5.948

7.  Post-cesarean surgical site infection due to Buttiauxella agrestis.

Authors:  Vicente Sperb Antonello; Jessica Dallé; Guilherme Campos Domingues; Jorge Alberto Santiago Ferreira; Maria do Carmo Queiroz Fontoura; Fábio Borges Knapp
Journal:  Int J Infect Dis       Date:  2014-03-16       Impact factor: 3.623

8.  Colibacter massiliensis gen. nov. sp. nov., a novel Gram-stain-positive anaerobic diplococcal bacterium, isolated from the human left colon.

Authors:  Hussein Anani; Rita Abou Abdallah; May Khoder; Anthony Fontanini; Morgane Mailhe; Davide Ricaboni; Didier Raoult; Pierre-Edouard Fournier
Journal:  Sci Rep       Date:  2019-11-20       Impact factor: 4.379

9.  Draft Genome Sequence of Salirhabdus euzebyi Strain Q1438.

Authors:  Rita Zgheib; Hussein Anani; Didier Raoult; Pierre-Edouard Fournier
Journal:  Microbiol Resour Announc       Date:  2020-04-30

10.  Trimmomatic: a flexible trimmer for Illumina sequence data.

Authors:  Anthony M Bolger; Marc Lohse; Bjoern Usadel
Journal:  Bioinformatics       Date:  2014-04-01       Impact factor: 6.937

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