Literature DB >> 34972928

Evaluation of Glycan-Binding Specificity by Glycoconjugate Microarray with an Evanescent-Field Fluorescence Detection System.

Lalhaba Oinam1, Hiroaki Tateno2.   

Abstract

Glycan microarray is an essential tool to study glycan-binding proteins called lectins. Using glycan microarrays, glycan-binding specificity can be analyzed by incubation with an array in which a series of glycans are immobilized. Various research groups in the world have developed glycan microarray. Among them, our glycan microarray has two unique points: one is the incorporation of the evanescent-field fluorescence detection system, and another is the use of multivalent glycopolymers. These two unique properties allow high-sensitive detection from a relatively limited amount of only nanograms of lectins, which could even be applied in crude samples such as cell lysates and cell culture media. Thus, this system is suitable for the first screening of lectins, lectin-like molecules, lectin candidates, and lectin mutants. Here we describe the protocols to analyze glycan-binding specificity of lectins using our glycan microarray system.
© 2022. Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Glycan microarray; Glycan-binding specificity; Glycoconjugate; Lectins; evanescent-field

Mesh:

Substances:

Year:  2022        PMID: 34972928     DOI: 10.1007/978-1-0716-2148-6_2

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  24 in total

1.  Specific Precipitating Activity of Plant Agglutinins (Lectins).

Authors:  W C Boyd; E Shapleigh
Journal:  Science       Date:  1954-03-26       Impact factor: 47.728

2.  Next-Generation Glycan Microarray Enabled by DNA-Coded Glycan Library and Next-Generation Sequencing Technology.

Authors:  Maomao Yan; Yuyang Zhu; Xueyun Liu; Yi Lasanajak; Jinglin Xiong; Jingqiao Lu; Xi Lin; David Ashline; Vernon Reinhold; David F Smith; Xuezheng Song
Journal:  Anal Chem       Date:  2019-06-24       Impact factor: 6.986

3.  Clec10a regulates mite-induced dermatitis.

Authors:  Kazumasa Kanemaru; Emiko Noguchi; Satoko Tahara-Hanaoka; Seiya Mizuno; Hiroaki Tateno; Kaori Denda-Nagai; Tatsuro Irimura; Hiroshi Matsuda; Fumihiro Sugiyama; Satoru Takahashi; Kazuko Shibuya; Akira Shibuya; Yasuhiro Fujisawa; Yoshiyuki Nakamura
Journal:  Sci Immunol       Date:  2019-12-06

Review 4.  Sweet spots in functional glycomics.

Authors:  James C Paulson; Ola Blixt; Brian E Collins
Journal:  Nat Chem Biol       Date:  2006-05       Impact factor: 15.040

5.  Tailoring GalNAcα1-3Galβ-specific lectins from a multi-specific fungal galectin: dramatic change of carbohydrate specificity by a single amino-acid substitution.

Authors:  Dan Hu; Hiroaki Tateno; Takashi Sato; Hisashi Narimatsu; Jun Hirabayashi
Journal:  Biochem J       Date:  2013-07-15       Impact factor: 3.857

6.  Sialoside specificity of the siglec family assessed using novel multivalent probes: identification of potent inhibitors of myelin-associated glycoprotein.

Authors:  Ola Blixt; Brian E Collins; Ingrid M van den Nieuwenhof; Paul R Crocker; James C Paulson
Journal:  J Biol Chem       Date:  2003-05-28       Impact factor: 5.157

7.  Frontal affinity chromatography: sugar-protein interactions.

Authors:  Hiroaki Tateno; Sachiko Nakamura-Tsuruta; Jun Hirabayashi
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

8.  Glycoconjugate microarray based on an evanescent-field fluorescence-assisted detection principle for investigation of glycan-binding proteins.

Authors:  Hiroaki Tateno; Atsushi Mori; Noboru Uchiyama; Rikio Yabe; Jun Iwaki; Toshihide Shikanai; Takashi Angata; Hisashi Narimatsu; Jun Hirabayashi
Journal:  Glycobiology       Date:  2008-07-16       Impact factor: 4.313

9.  Kinetic measurement of the interaction between an oligosaccharide and lectins by a biosensor based on surface plasmon resonance.

Authors:  Y Shinohara; F Kim; M Shimizu; M Goto; M Tosu; Y Hasegawa
Journal:  Eur J Biochem       Date:  1994-07-01

10.  Identification, Characterization, and X-ray Crystallographic Analysis of a Novel Type of Lectin AJLec from the Sea Anemone Anthopleura japonica.

Authors:  Hideaki Unno; Azusa Nakamura; Shingo Mori; Shuichiro Goda; Kenichi Yamaguchi; Keiko Hiemori; Hiroaki Tateno; Tomomitsu Hatakeyama
Journal:  Sci Rep       Date:  2018-08-01       Impact factor: 4.379

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