Literature DB >> 34965413

Imaging transcriptomics: Convergent cellular, transcriptomic, and molecular neuroimaging signatures in the healthy adult human brain.

Daniel Martins1, Alessio Giacomel2, Steven C R Williams2, Federico Turkheimer2, Ottavia Dipasquale2, Mattia Veronese3.   

Abstract

The integration of transcriptomic and neuroimaging data, "imaging transcriptomics," has recently emerged to generate hypotheses about potential biological pathways underlying regional variability in neuroimaging features. However, the validity of this approach is yet to be examined in depth. Here, we sought to bridge this gap by performing transcriptomic decoding of the regional distribution of well-known molecular markers spanning different elements of the biology of the healthy human brain. Imaging transcriptomics identifies biological and cell pathways that are consistent with the known biology of a wide range of molecular neuroimaging markers. The extent to which it can capture patterns of gene expression that align well with elements of the biology of the neuroinflammatory axis, at least in healthy controls without a proinflammatory challenge, is inconclusive. Imaging transcriptomics might constitute an interesting approach to improve our understanding of the biological pathways underlying regional variability in a wide range of neuroimaging phenotypes.
Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Allen Brain Atlas; imaging transcriptomics; neuroimaging; positron tomography emission; transcriptomics

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Year:  2021        PMID: 34965413     DOI: 10.1016/j.celrep.2021.110173

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  3 in total

1.  Integrating neuroimaging and gene expression data using the imaging transcriptomics toolbox.

Authors:  Alessio Giacomel; Daniel Martins; Matteo Frigo; Federico Turkheimer; Steven C R Williams; Ottavia Dipasquale; Mattia Veronese
Journal:  STAR Protoc       Date:  2022-04-15

Review 2.  Recent Technical Advances in Accelerating the Clinical Translation of Small Animal Brain Imaging: Hybrid Imaging, Deep Learning, and Transcriptomics.

Authors:  Wuwei Ren; Bin Ji; Yihui Guan; Lei Cao; Ruiqing Ni
Journal:  Front Med (Lausanne)       Date:  2022-03-24

3.  Cellular and molecular signatures of in vivo imaging measures of GABAergic neurotransmission in the human brain.

Authors:  Paulina Barbara Lukow; Daniel Martins; Mattia Veronese; Anthony Christopher Vernon; Philip McGuire; Federico Edoardo Turkheimer; Gemma Modinos
Journal:  Commun Biol       Date:  2022-04-19
  3 in total

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