Literature DB >> 34963763

Hidden and apparent twins in uranyl-oxide minerals agrinierite and rameauite: a demonstration of metric and reticular merohedry.

Jakub Plášil1, Václav Petříček1, Radek Škoda2, Nicolas Meisser3, Anatoly V Kasatkin4.   

Abstract

In this work, the structures of chemically related uranyl-oxide minerals agrinierite and rameauite have been revisited and some corrections to the available structure data are provided. Both structures were found to be twinned. The two minerals are chemically similar, and though their structures differ considerably, their unit-cell metrics are similar. Agrinierite was found to be twinned by metric merohedry (diffraction type I), whereas the structure of rameauite is twinned by reticular merohedry (diffraction type II). The twinning of the monoclinic unit cells (true cells) leads to pseudo-orthorhombic or pseudo-tetragonal supercells in the single-crystal diffraction patterns of both minerals. According to the new data and refinement, agrinierite is monoclinic (space group Cm), with a = 14.069 (3), b = 14.220 (3), c = 13.967 (3) Å, β = 120.24 (12)° and V = 2414.2 (12) Å3 (Z = 2). The twinning can be expressed as a mirror in (101) (apart from the inversion twin), which leads to a supercell with a = 14.121, b = 14.276, c = 24.221 Å and V = 2 × 2441 Å3, which is F centered. The new structure refinement converged to R = 3.54% for 6545 unique observed reflections with I > 3σ(I) and GOF = 1.07. Rameauite is also monoclinic (space group Cc), with a = 13.947 (3), b = 14.300 (3), c = 13.888 (3) Å, β = 118.50 (3)° and V = 2434.3 (11) Å3 (Z = 2). The twinning can be expressed as a mirror in (101) (apart from the inversion twin), which leads to a supercell with a = 14.223, b = 14.300, c = 23.921 Å and V = 2 × 2434 Å3, which is C centered. The new structure refinement of rameauite converged to R = 4.23% for 2344 unique observed reflections with I > 3σ(I) and GOF = 1.48. The current investigation documented how peculiar twinning can be, not only for this group of minerals, and how care must be taken in handling the data biased by twinning. © Jakub Plášil et al. 2021.

Entities:  

Keywords:  Jana2020; agrinierite; merohedry; rameauite; twinning

Year:  2021        PMID: 34963763      PMCID: PMC8662962          DOI: 10.1107/S1600576721009663

Source DB:  PubMed          Journal:  J Appl Crystallogr        ISSN: 0021-8898            Impact factor:   3.304


  10 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Recent developments in the methods and applications of the bond valence model.

Authors:  Ian David Brown
Journal:  Chem Rev       Date:  2009-12       Impact factor: 60.622

3.  Layer-structured uranyl-oxide hydroxy-hydrates with Pr(iii) and Tb(iii) ions: hydroxyl to oxo transition driven by interlayer cations.

Authors:  Kimbal Thane Lu; Yingjie Zhang; Tao Wei; Jiří Čejka; Rongkun Zheng
Journal:  Dalton Trans       Date:  2020-04-17       Impact factor: 4.390

4.  Elucidation of the Structure and Vibrational Spectroscopy of Synthetic Metaschoepite and Its Dehydration Product.

Authors:  Marie C Kirkegaard; J L Niedziela; Andrew Miskowiec; Ashley E Shields; Brian B Anderson
Journal:  Inorg Chem       Date:  2019-05-17       Impact factor: 5.165

5.  Syntheses, Crystal Structures, and Spectroscopic Studies of Uranyl Oxide Hydrate Phases with La(III)/Nd(III) Ions.

Authors:  Yingjie Zhang; Robert D Aughterson; Zhaoming Zhang; Tao Wei; Kimbal Lu; Jiří Čejka; Inna Karatchevtseva
Journal:  Inorg Chem       Date:  2019-08-02       Impact factor: 5.165

6.  Crystal structure of the uranyl arsenate mineral hügelite, Pb2(UO2)3O2(AsO4)2(H2O)5, revisited: a correct unit cell, twinning and hydrogen bonding.

Authors:  Jakub Plášil; Václav Petříček; Pavel Škácha
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2021-05-14

7.  Comprehensive derivation of bond-valence parameters for ion pairs involving oxygen.

Authors:  Olivier Charles Gagné; Frank Christopher Hawthorne
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2015-09-30

8.  SHELXT - integrated space-group and crystal-structure determination.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A Found Adv       Date:  2015-01-01       Impact factor: 2.290

9.  Nollmotzite, Mg[UV(UVIO2)2O4F3]·4H2O, the first natural uranium oxide containing fluorine.

Authors:  Jakub Plášil; Anthony R Kampf; Radek Škoda; Jiří Čejka
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2018-06-28
  10 in total

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