Literature DB >> 34951956

Functional precision oncology: Testing tumors with drugs to identify vulnerabilities and novel combinations.

Anthony Letai1, Patrick Bhola2, Alana L Welm3.   

Abstract

Functional precision medicine is a strategy whereby live tumor cells from affected individuals are directly perturbed with drugs to provide immediately translatable, personalized information to guide therapy. The heterogeneity of human cancer has led to the realization that personalized approaches are needed to improve treatment outcomes. Precision oncology has traditionally used static features of the tumor to dictate which therapies should be used. Static features can include expression of key targets or genomic analysis of mutations to identify therapeutically targetable "drivers." Although a surprisingly small proportion of individuals derive clinical benefit from the static approach, functional precision medicine can provide additional information regarding tumor vulnerabilities. We discuss emerging technologies for functional precision medicine as well as limitations and challenges in using these assays in the clinical trials that will be necessary to determine whether functional precision medicine can improve outcomes and eventually become a standard tool in clinical oncology.
Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Precision medicine; functional precision medicine; patient-derived models; precision oncology

Mesh:

Substances:

Year:  2021        PMID: 34951956      PMCID: PMC8752507          DOI: 10.1016/j.ccell.2021.12.004

Source DB:  PubMed          Journal:  Cancer Cell        ISSN: 1535-6108            Impact factor:   31.743


  68 in total

1.  Drug-induced death signaling strategy rapidly predicts cancer response to chemotherapy.

Authors:  Joan Montero; Kristopher A Sarosiek; Joseph D DeAngelo; Ophélia Maertens; Jeremy Ryan; Dalia Ercan; Huiying Piao; Neil S Horowitz; Ross S Berkowitz; Ursula Matulonis; Pasi A Jänne; Philip C Amrein; Karen Cichowski; Ronny Drapkin; Anthony Letai
Journal:  Cell       Date:  2015-02-26       Impact factor: 41.582

2.  An implantable microdevice to perform high-throughput in vivo drug sensitivity testing in tumors.

Authors:  Oliver Jonas; Heather M Landry; Jason E Fuller; John T Santini; Jose Baselga; Robert I Tepper; Michael J Cima; Robert Langer
Journal:  Sci Transl Med       Date:  2015-04-22       Impact factor: 17.956

Review 3.  Dormant, quiescent, tolerant and persister cells: Four synonyms for the same target in cancer.

Authors:  François M Vallette; Christophe Olivier; Frédéric Lézot; Lisa Oliver; Denis Cochonneau; Lisenn Lalier; Pierre-François Cartron; Dominique Heymann
Journal:  Biochem Pharmacol       Date:  2018-11-09       Impact factor: 5.858

4.  High-Throughput Genomics and Clinical Outcome in Hard-to-Treat Advanced Cancers: Results of the MOSCATO 01 Trial.

Authors:  Christophe Massard; Stefan Michiels; Charles Ferté; Marie-Cécile Le Deley; Ludovic Lacroix; Antoine Hollebecque; Loic Verlingue; Ecaterina Ileana; Silvia Rosellini; Samy Ammari; Maud Ngo-Camus; Rastislav Bahleda; Anas Gazzah; Andrea Varga; Sophie Postel-Vinay; Yohann Loriot; Caroline Even; Ingrid Breuskin; Nathalie Auger; Bastien Job; Thierry De Baere; Frederic Deschamps; Philippe Vielh; Jean-Yves Scoazec; Vladimir Lazar; Catherine Richon; Vincent Ribrag; Eric Deutsch; Eric Angevin; Gilles Vassal; Alexander Eggermont; Fabrice André; Jean-Charles Soria
Journal:  Cancer Discov       Date:  2017-04-01       Impact factor: 39.397

5.  Implementing a Functional Precision Medicine Tumor Board for Acute Myeloid Leukemia.

Authors:  Tero Aittokallio; Krister Wennerberg; Caroline A Heckman; Olli Kallioniemi; Kimmo Porkka; Disha Malani; Ashwini Kumar; Oscar Brück; Mika Kontro; Bhagwan Yadav; Monica Hellesøy; Heikki Kuusanmäki; Olli Dufva; Matti Kankainen; Samuli Eldfors; Swapnil Potdar; Jani Saarela; Laura Turunen; Alun Parsons; Imre Västrik; Katja Kivinen; Janna Saarela; Riikka Räty; Minna Lehto; Maija Wolf; Bjorn Tore Gjertsen; Satu Mustjoki
Journal:  Cancer Discov       Date:  2021-11-17       Impact factor: 39.397

Review 6.  Tumor organoids: Opportunities and challenges to guide precision medicine.

Authors:  Vivien Veninga; Emile E Voest
Journal:  Cancer Cell       Date:  2021-08-19       Impact factor: 31.743

7.  International network of cancer genome projects.

Authors:  Thomas J Hudson; Warwick Anderson; Axel Artez; Anna D Barker; Cindy Bell; Rosa R Bernabé; M K Bhan; Fabien Calvo; Iiro Eerola; Daniela S Gerhard; Alan Guttmacher; Mark Guyer; Fiona M Hemsley; Jennifer L Jennings; David Kerr; Peter Klatt; Patrik Kolar; Jun Kusada; David P Lane; Frank Laplace; Lu Youyong; Gerd Nettekoven; Brad Ozenberger; Jane Peterson; T S Rao; Jacques Remacle; Alan J Schafer; Tatsuhiro Shibata; Michael R Stratton; Joseph G Vockley; Koichi Watanabe; Huanming Yang; Matthew M F Yuen; Bartha M Knoppers; Martin Bobrow; Anne Cambon-Thomsen; Lynn G Dressler; Stephanie O M Dyke; Yann Joly; Kazuto Kato; Karen L Kennedy; Pilar Nicolás; Michael J Parker; Emmanuelle Rial-Sebbag; Carlos M Romeo-Casabona; Kenna M Shaw; Susan Wallace; Georgia L Wiesner; Nikolajs Zeps; Peter Lichter; Andrew V Biankin; Christian Chabannon; Lynda Chin; Bruno Clément; Enrique de Alava; Françoise Degos; Martin L Ferguson; Peter Geary; D Neil Hayes; Thomas J Hudson; Amber L Johns; Arek Kasprzyk; Hidewaki Nakagawa; Robert Penny; Miguel A Piris; Rajiv Sarin; Aldo Scarpa; Tatsuhiro Shibata; Marc van de Vijver; P Andrew Futreal; Hiroyuki Aburatani; Mónica Bayés; David D L Botwell; Peter J Campbell; Xavier Estivill; Daniela S Gerhard; Sean M Grimmond; Ivo Gut; Martin Hirst; Carlos López-Otín; Partha Majumder; Marco Marra; John D McPherson; Hidewaki Nakagawa; Zemin Ning; Xose S Puente; Yijun Ruan; Tatsuhiro Shibata; Michael R Stratton; Hendrik G Stunnenberg; Harold Swerdlow; Victor E Velculescu; Richard K Wilson; Hong H Xue; Liu Yang; Paul T Spellman; Gary D Bader; Paul C Boutros; Peter J Campbell; Paul Flicek; Gad Getz; Roderic Guigó; Guangwu Guo; David Haussler; Simon Heath; Tim J Hubbard; Tao Jiang; Steven M Jones; Qibin Li; Nuria López-Bigas; Ruibang Luo; Lakshmi Muthuswamy; B F Francis Ouellette; John V Pearson; Xose S Puente; Victor Quesada; Benjamin J Raphael; Chris Sander; Tatsuhiro Shibata; Terence P Speed; Lincoln D Stein; Joshua M Stuart; Jon W Teague; Yasushi Totoki; Tatsuhiko Tsunoda; Alfonso Valencia; David A Wheeler; Honglong Wu; Shancen Zhao; Guangyu Zhou; Lincoln D Stein; Roderic Guigó; Tim J Hubbard; Yann Joly; Steven M Jones; Arek Kasprzyk; Mark Lathrop; Nuria López-Bigas; B F Francis Ouellette; Paul T Spellman; Jon W Teague; Gilles Thomas; Alfonso Valencia; Teruhiko Yoshida; Karen L Kennedy; Myles Axton; Stephanie O M Dyke; P Andrew Futreal; Daniela S Gerhard; Chris Gunter; Mark Guyer; Thomas J Hudson; John D McPherson; Linda J Miller; Brad Ozenberger; Kenna M Shaw; Arek Kasprzyk; Lincoln D Stein; Junjun Zhang; Syed A Haider; Jianxin Wang; Christina K Yung; Anthony Cros; Anthony Cross; Yong Liang; Saravanamuttu Gnaneshan; Jonathan Guberman; Jack Hsu; Martin Bobrow; Don R C Chalmers; Karl W Hasel; Yann Joly; Terry S H Kaan; Karen L Kennedy; Bartha M Knoppers; William W Lowrance; Tohru Masui; Pilar Nicolás; Emmanuelle Rial-Sebbag; Laura Lyman Rodriguez; Catherine Vergely; Teruhiko Yoshida; Sean M Grimmond; Andrew V Biankin; David D L Bowtell; Nicole Cloonan; Anna deFazio; James R Eshleman; Dariush Etemadmoghadam; Brooke B Gardiner; Brooke A Gardiner; James G Kench; Aldo Scarpa; Robert L Sutherland; Margaret A Tempero; Nicola J Waddell; Peter J Wilson; John D McPherson; Steve Gallinger; Ming-Sound Tsao; Patricia A Shaw; Gloria M Petersen; Debabrata Mukhopadhyay; Lynda Chin; Ronald A DePinho; Sarah Thayer; Lakshmi Muthuswamy; Kamran Shazand; Timothy Beck; Michelle Sam; Lee Timms; Vanessa Ballin; Youyong Lu; Jiafu Ji; Xiuqing Zhang; Feng Chen; Xueda Hu; Guangyu Zhou; Qi Yang; Geng Tian; Lianhai Zhang; Xiaofang Xing; Xianghong Li; Zhenggang Zhu; Yingyan Yu; Jun Yu; Huanming Yang; Mark Lathrop; Jörg Tost; Paul Brennan; Ivana Holcatova; David Zaridze; Alvis Brazma; Lars Egevard; Egor Prokhortchouk; Rosamonde Elizabeth Banks; Mathias Uhlén; Anne Cambon-Thomsen; Juris Viksna; Fredrik Ponten; Konstantin Skryabin; Michael R Stratton; P Andrew Futreal; Ewan Birney; Ake Borg; Anne-Lise Børresen-Dale; Carlos Caldas; John A Foekens; Sancha Martin; Jorge S Reis-Filho; Andrea L Richardson; Christos Sotiriou; Hendrik G Stunnenberg; Giles Thoms; Marc van de Vijver; Laura van't Veer; Fabien Calvo; Daniel Birnbaum; Hélène Blanche; Pascal Boucher; Sandrine Boyault; Christian Chabannon; Ivo Gut; Jocelyne D Masson-Jacquemier; Mark Lathrop; Iris Pauporté; Xavier Pivot; Anne Vincent-Salomon; Eric Tabone; Charles Theillet; Gilles Thomas; Jörg Tost; Isabelle Treilleux; Fabien Calvo; Paulette Bioulac-Sage; Bruno Clément; Thomas Decaens; Françoise Degos; Dominique Franco; Ivo Gut; Marta Gut; Simon Heath; Mark Lathrop; Didier Samuel; Gilles Thomas; Jessica Zucman-Rossi; Peter Lichter; Roland Eils; Benedikt Brors; Jan O Korbel; Andrey Korshunov; Pablo Landgraf; Hans Lehrach; Stefan Pfister; Bernhard Radlwimmer; Guido Reifenberger; Michael D Taylor; Christof von Kalle; Partha P Majumder; Rajiv Sarin; T S Rao; M K Bhan; Aldo Scarpa; Paolo Pederzoli; Rita A Lawlor; Massimo Delledonne; Alberto Bardelli; Andrew V Biankin; Sean M Grimmond; Thomas Gress; David Klimstra; Giuseppe Zamboni; Tatsuhiro Shibata; Yusuke Nakamura; Hidewaki Nakagawa; Jun Kusada; Tatsuhiko Tsunoda; Satoru Miyano; Hiroyuki Aburatani; Kazuto Kato; Akihiro Fujimoto; Teruhiko Yoshida; Elias Campo; Carlos López-Otín; Xavier Estivill; Roderic Guigó; Silvia de Sanjosé; Miguel A Piris; Emili Montserrat; Marcos González-Díaz; Xose S Puente; Pedro Jares; Alfonso Valencia; Heinz Himmelbauer; Heinz Himmelbaue; Victor Quesada; Silvia Bea; Michael R Stratton; P Andrew Futreal; Peter J Campbell; Anne Vincent-Salomon; Andrea L Richardson; Jorge S Reis-Filho; Marc van de Vijver; Gilles Thomas; Jocelyne D Masson-Jacquemier; Samuel Aparicio; Ake Borg; Anne-Lise Børresen-Dale; Carlos Caldas; John A Foekens; Hendrik G Stunnenberg; Laura van't Veer; Douglas F Easton; Paul T Spellman; Sancha Martin; Anna D Barker; Lynda Chin; Francis S Collins; Carolyn C Compton; Martin L Ferguson; Daniela S Gerhard; Gad Getz; Chris Gunter; Alan Guttmacher; Mark Guyer; D Neil Hayes; Eric S Lander; Brad Ozenberger; Robert Penny; Jane Peterson; Chris Sander; Kenna M Shaw; Terence P Speed; Paul T Spellman; Joseph G Vockley; David A Wheeler; Richard K Wilson; Thomas J Hudson; Lynda Chin; Bartha M Knoppers; Eric S Lander; Peter Lichter; Lincoln D Stein; Michael R Stratton; Warwick Anderson; Anna D Barker; Cindy Bell; Martin Bobrow; Wylie Burke; Francis S Collins; Carolyn C Compton; Ronald A DePinho; Douglas F Easton; P Andrew Futreal; Daniela S Gerhard; Anthony R Green; Mark Guyer; Stanley R Hamilton; Tim J Hubbard; Olli P Kallioniemi; Karen L Kennedy; Timothy J Ley; Edison T Liu; Youyong Lu; Partha Majumder; Marco Marra; Brad Ozenberger; Jane Peterson; Alan J Schafer; Paul T Spellman; Hendrik G Stunnenberg; Brandon J Wainwright; Richard K Wilson; Huanming Yang
Journal:  Nature       Date:  2010-04-15       Impact factor: 49.962

8.  High-throughput dynamic BH3 profiling may quickly and accurately predict effective therapies in solid tumors.

Authors:  Patrick D Bhola; Eman Ahmed; Jennifer L Guerriero; Ewa Sicinska; Emily Su; Elizaveta Lavrova; Jing Ni; Otari Chipashvili; Timothy Hagan; Marissa S Pioso; Kelley McQueeney; Kimmie Ng; Andrew J Aguirre; James M Cleary; David Cocozziello; Alaba Sotayo; Jeremy Ryan; Jean J Zhao; Anthony Letai
Journal:  Sci Signal       Date:  2020-06-16       Impact factor: 8.192

9.  Organoid Profiling Identifies Common Responders to Chemotherapy in Pancreatic Cancer.

Authors:  Pascal Belleau; Dannielle D Engle; Hervé Tiriac; Dennis Plenker; Astrid Deschênes; Tim D D Somerville; Fieke E M Froeling; Richard A Burkhart; Robert E Denroche; Gun-Ho Jang; Koji Miyabayashi; C Megan Young; Hardik Patel; Michelle Ma; Joseph F LaComb; Randze Lerie D Palmaira; Ammar A Javed; Jasmine C Huynh; Molly Johnson; Kanika Arora; Nicolas Robine; Minita Shah; Rashesh Sanghvi; Austin B Goetz; Cinthya Y Lowder; Laura Martello; Else Driehuis; Nicolas LeComte; Gokce Askan; Christine A Iacobuzio-Donahue; Hans Clevers; Laura D Wood; Ralph H Hruban; Elizabeth Thompson; Andrew J Aguirre; Brian M Wolpin; Aaron Sasson; Joseph Kim; Maoxin Wu; Juan Carlos Bucobo; Peter Allen; Divyesh V Sejpal; William Nealon; James D Sullivan; Jordan M Winter; Phyllis A Gimotty; Jean L Grem; Dominick J DiMaio; Jonathan M Buscaglia; Paul M Grandgenett; Jonathan R Brody; Michael A Hollingsworth; Grainne M O'Kane; Faiyaz Notta; Edward Kim; James M Crawford; Craig Devoe; Allyson Ocean; Christopher L Wolfgang; Kenneth H Yu; Ellen Li; Christopher R Vakoc; Benjamin Hubert; Sandra E Fischer; Julie M Wilson; Richard Moffitt; Jennifer Knox; Alexander Krasnitz; Steven Gallinger; David A Tuveson
Journal:  Cancer Discov       Date:  2018-05-31       Impact factor: 38.272

10.  Breast tumor PDXs are genetically plastic and correspond to a subset of aggressive cancers prone to relapse.

Authors:  Stanislas du Manoir; Béatrice Orsetti; Rui Bras-Gonçalves; Tien-Tuan Nguyen; Laurence Lasorsa; Florence Boissière; Blandine Massemin; Pierre-Emmanuel Colombo; Frédéric Bibeau; William Jacot; Charles Theillet
Journal:  Mol Oncol       Date:  2013-12-19       Impact factor: 6.603

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  11 in total

1.  A multiplex implantable microdevice assay identifies synergistic combinations of cancer immunotherapies and conventional drugs.

Authors:  Zuzana Tatarova; Dylan C Blumberg; James E Korkola; Laura M Heiser; John L Muschler; Pepper J Schedin; Sebastian W Ahn; Gordon B Mills; Lisa M Coussens; Oliver Jonas; Joe W Gray
Journal:  Nat Biotechnol       Date:  2022-07-04       Impact factor: 68.164

2.  The drug-induced phenotypic landscape of colorectal cancer organoids.

Authors:  Johannes Betge; Niklas Rindtorff; Jan Sauer; Benedikt Rauscher; Clara Dingert; Haristi Gaitantzi; Frank Herweck; Kauthar Srour-Mhanna; Thilo Miersch; Erica Valentini; Kim E Boonekamp; Veronika Hauber; Tobias Gutting; Larissa Frank; Sebastian Belle; Timo Gaiser; Inga Buchholz; Ralf Jesenofsky; Nicolai Härtel; Tianzuo Zhan; Bernd Fischer; Katja Breitkopf-Heinlein; Elke Burgermeister; Matthias P Ebert; Michael Boutros
Journal:  Nat Commun       Date:  2022-06-06       Impact factor: 17.694

Review 3.  Advances of Patient-Derived Organoids in Personalized Radiotherapy.

Authors:  Yuenan Wang; Ye Li; Zonghai Sheng; Weiwei Deng; Hongyan Yuan; Shubin Wang; Yajie Liu
Journal:  Front Oncol       Date:  2022-04-29       Impact factor: 5.738

4.  Tissue-specific identification of multi-omics features for pan-cancer drug response prediction.

Authors:  Zhi Zhao; Shixiong Wang; Manuela Zucknick; Tero Aittokallio
Journal:  iScience       Date:  2022-07-19

5.  Successful Retreatment With Venetoclax in a Patient With Chronic Lymphocytic Leukemia.

Authors:  Ross A Jackson; Victoria M Smith; Sandrine Jayne; Cosima Drewes; Susanne Bens; Reiner Siebert; Martin J S Dyer; Harriet S Walter
Journal:  Hemasphere       Date:  2022-07-15

6.  Functional testing of relapsed chronic lymphocytic leukemia guides precision medicine and maps response and resistance mechanisms. An index case.

Authors:  Sigrid S Skånland; Marit Inngjerdingen; Henrik Bendiksen; Jamie York; Signe Spetalen; Ludvig A Munthe; Geir E Tjønnfjord
Journal:  Haematologica       Date:  2022-08-01       Impact factor: 11.047

Review 7.  Functional Drug Screening in the Era of Precision Medicine.

Authors:  Giulia C Napoli; William D Figg; Cindy H Chau
Journal:  Front Med (Lausanne)       Date:  2022-07-08

8.  Metabolic-imaging of human glioblastoma live tumors: A new precision-medicine approach to predict tumor treatment response early.

Authors:  Mariangela Morelli; Francesca Lessi; Serena Barachini; Romano Liotti; Nicola Montemurro; Paolo Perrini; Orazio Santo Santonocito; Carlo Gambacciani; Matija Snuderl; Francesco Pieri; Filippo Aquila; Azzurra Farnesi; Antonio Giuseppe Naccarato; Paolo Viacava; Francesco Cardarelli; Gianmarco Ferri; Paul Mulholland; Diego Ottaviani; Fabiola Paiar; Gaetano Liberti; Francesco Pasqualetti; Michele Menicagli; Paolo Aretini; Giovanni Signore; Sara Franceschi; Chiara Maria Mazzanti
Journal:  Front Oncol       Date:  2022-09-05       Impact factor: 5.738

Review 9.  In Vivo Modeling of Human Breast Cancer Using Cell Line and Patient-Derived Xenografts.

Authors:  Eric P Souto; Lacey E Dobrolecki; Hugo Villanueva; Andrew G Sikora; Michael T Lewis
Journal:  J Mammary Gland Biol Neoplasia       Date:  2022-06-13       Impact factor: 2.698

10.  Editorial: Next-Generation Cancer Therapies Based on a (R)evolution of the Biomarker Landscape.

Authors:  Claudia Cerella; Anne Lorant; Katia Aquilano; Marc Diederich
Journal:  Front Pharmacol       Date:  2022-03-07       Impact factor: 5.810

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