| Literature DB >> 34950578 |
Meihua Shao1, Zhongfeng Niu2, Linyang He3, Zhaoxing Fang3, Jie He2, Zongyu Xie4, Guohua Cheng3, Jian Wang1.
Abstract
We aimed to build radiomics models based on triple-phase CT images combining clinical features to predict the risk rating of gastrointestinal stromal tumors (GISTs). A total of 231 patients with pathologically diagnosed GISTs from July 2012 to July 2020 were categorized into a training data set (82 patients with high risk, 80 patients with low risk) and a validation data set (35 patients with high risk, 34 patients with low risk) with a ratio of 7:3. Four diagnostic models were constructed by assessing 20 clinical characteristics and 18 radiomic features that were extracted from a lesion mask based on triple-phase CT images. The receiver operating characteristic (ROC) curves were applied to calculate the diagnostic performance of these models, and ROC curves of these models were compared using Delong test in different data sets. The results of ROC analyses showed that areas under ROC curves (AUC) of model 4 [Clinic + CT value of unenhanced (CTU) + CT value of arterial phase (CTA) + value of venous phase (CTV)], model 1 (Clinic + CTU), model 2 (Clinic + CTA), and model 3 (Clinic + CTV) were 0.925, 0.894, 0.909, and 0.914 in the training set and 0.897, 0.866, 0,892, and 0.892 in the validation set, respectively. Model 4, model 1, model 2, and model 3 yielded an accuracy of 88.3%, 85.8%, 86.4%, and 84.6%, a sensitivity of 85.4%, 84.2%, 76.8%, and 78.0%, and a specificity of 91.2%, 87.5%, 96.2%, and 91.2% in the training set and an accuracy of 88.4%, 84.1%, 82.6%, and 82.6%, a sensitivity of 88.6%, 77.1%, 74.3%, and 85.7%, and a specificity of 88.2%, 91.2%, 91.2%, and 79.4% in the validation set, respectively. There was a significant difference between model 4 and model 1 in discriminating the risk rating in gastrointestinal stromal tumors in the training data set (Delong test, p < 0.05). The radiomic models based on clinical features and triple-phase CT images manifested excellent accuracy for the discrimination of risk rating of GISTs.Entities:
Keywords: abdomen; gastrointestinal stromal tumors; radiomics models; risk rating; triple-phase CT images
Year: 2021 PMID: 34950578 PMCID: PMC8689687 DOI: 10.3389/fonc.2021.737302
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Figure 1The inclusion and exclusion criteria of patients.
Figure 2Flow chart of the proposed workflow. GISTs were divided into a training set and a validation set. According to the NIH criteria, the lesion segmentation and features extraction were performed. The radiomics models were built based on CT images combining clinical information, and a comparison between models was also performed.
The clinical characteristics and CT features in the training and validation sets.
| Training set | Validation set | |||||
|---|---|---|---|---|---|---|
| Low risk | High risk |
| Low risk | High risk |
| |
| Age | 59.14 ± 9.92 | 58.71 ± 12.84 | 0.812 | 61.24 ± 8.41 | 60.06 ± 10.68 | 0.613 |
| Sex (Female/Male) | 39/41 | 46/36 | 0.350 | 16/18 | 18/17 | 0.717 |
| CTU | 33.55 ± 9.53 | 33.55 ± 5.79 | 1.000 | 33.78 ± 6.94 | 35.05 ± 6.21 | 0.426 |
| CTA | 53.00 ± 13.84 | 56.74 ± 15.07 | 0.107 | 53.77 ± 10.90 | 54.43 ± 13.45 | 0.823 |
| CTV | 66.50 ± 17.41 | 71.60 ± 18.66 | 0.079 | 70.07 ± 15.13 | 70.24 ± 16.82 | 0.965 |
| LD (mm) | 25.59 ± 10.87 | 64.24 ± 40.69 |
| 24.24 ± 10.70 | 59.06 ± 34.09 |
|
| SD (mm) | 21.29 ± 9.42 | 49.45 ± 27.56 |
| 20.24 ± 9.60 | 45.34 ± 20.22 |
|
| Location | 0.420 | 0.812 | ||||
| Cardia | 4 | 2 | 2 | 1 | ||
| Fundus | 28 | 22 | 12 | 11 | ||
| Body | 38 | 49 | 16 | 20 | ||
| Antrum | 10 | 9 | 4 | 3 | ||
| Contour |
|
| ||||
| Round | 42 | 11 | 16 | 7 | ||
| Oval | 26 | 15 | 14 | 4 | ||
| Irregular | 12 | 56 | 4 | 24 | ||
| Growth pattern |
| 0.085 | ||||
| Endophytic | 44 | 18 | 14 | 9 | ||
| Exophytic | 26 | 39 | 18 | 18 | ||
| Mixed | 10 | 25 | 2 | 8 | ||
| Necrosis | 17 | 58 |
| 4 | 24 |
|
| Calcification | 13 | 17 | 0.464 | 2 | 7 | 0.167 |
| Surface ulceration | 8 | 31 |
| 1 | 11 |
|
| Intratumoral vessel | 1 | 21 |
| 0 | 6 |
|
| Symptom |
| 0.194 | ||||
| Hematemesis or black stool | 46 | 31 | 20 | 13 | ||
| Abdominal pain or discomfort | 11 | 20 | 3 | 5 | ||
p-values written in bold manifest a significant difference between the groups.
CTU, CT value of unenhanced; CTA, CT value of arterial phase; CTV, CT value of venous phase; LD, long diameter; SD, short diameter.
The significant features and coefficients in the four models.
| Model 4 | Model 1 | Model 2 | Model 3 | |
|---|---|---|---|---|
| Intercept | −3.90 | −4.12 | 5.45 | −1.45 |
| SD | 14.62 | 9.76 | ||
| Contour | 1.89 | 2.43 | 1.39 | 1.16 |
| wavelet-HLL_gldm_Large Dependence Emphasis_CTV | 7.26 | |||
| square_gldm_Dependence Non Uniformity Normalized_CTV | −5.63 | |||
| wavelet-LLL_gldm_Dependence Non Uniformity Normalized_CTU | −6.88 | |||
| wavelet-LLL_gldm_Large Dependence Emphasis_CTU | 7.42 | |||
| LD | 16.22 | |||
| wavelet-HLH_glrlm_Long Run Emphasis_CTA | 5.22 | |||
| wavelet-LHH_glrlm_Run Variance_CTA | −5.59 | |||
| wavelet-LLH_glcm_Idmn_CTA | −5.51 | |||
| wavelet-LLH_gldm_Small Dependence Low Gray Level Emphasis_CTA | −8.59 | |||
| wavelet-HHH_glszm_Small Area Emphasis_CTV | 2.19 | |||
| wavelet-LLL_glcm_Idn_CTV | −5.50 | |||
| wavelet-LLL_gldm_Large Dependence Emphasis_CTV | −1.05 | |||
| wavelet-LLL_glrlm_Run Percentage_CTV | −6.29 | |||
| wavelet-LL_glszm_ZoneEntropy_CTV | 2.64 | |||
| square_gldm_Dependence Non Uniformity Normalized_CTV | 0.94 | |||
| Square root_glcm_Idn_CTV | 4.37 |
SD, short diameter; GLDM, gray-level dependence matrix; LD, long diameter; GLRLM, gray-level run length matrix; GLCM, gray-level co-occurrence matrix; GLSZM, gray-level size zone matrix; Model 4, Clinic + CTU + CTA + CTV; Model 1, Clinic + CTU; Model 2, Clinic + CTA; Model 3, Clinic + CTV; CTU, CT value of unenhanced; CTA, CT value of arterial phase; CTV, CT value of venous phase.
Figure 3The ROC curves of the four models in predicting malignancy potential of GISTs in the training data set (A) and the validation data set (B). AUC, area under the receiver operating characteristic curve; GIST, gastrointestinal stromal tumors.
Figure 4The accuracy, sensitivity, and specificity of four models in both training data set (A) and validation data set (B). Color bars indicate radiomics models.
Diagnostic efficacy of four models in the discrimination between low-risk and high-risk GISTs in both training and validation sets.
| Model 4 | Model 1 | Model 2 | Model 3 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Training set | Validation set | Training set | Validation set | Training set | Validation set | Training set | Validation set | |||||||||
| Low | High | Low | High | Low | High | Low | High | Low | High | Low | High | Low | High | Low | High | |
| Accuracy | 88.3 | 88.4 | 85.8 | 84.1 | 86.4 | 82.6 | 84.6 | 82.6 | ||||||||
| Sensitivity | 85.4 | 88.6 | 84.2 | 77.1 | 76.8 | 74.3 | 78.0 | 85.7 | ||||||||
| Specificity | 91.2 | 88.2 | 87.5 | 91.2 | 96.2 | 91.2 | 91.2 | 79.4 | ||||||||
| AUC | 0.925 | 0.897 | 0.894 | 0.866 | 0.909 | 0.892 | 0.914 | 0.892 | ||||||||
AUC, area under the receiver operating characteristic curve; Model 4, Clinic + CTU + CTA + CTV; Model 1, Clinic + CTU; Model 2, Clinic + CTA; Model 3, Clinic + CTV; CTU, CT value of unenhanced; CTA, CT value of arterial phase; CTV, CT value of venous phase.
The DeLong test results of the four models.
| Cohort | Model 1 | Model 2 | AUC of Model A | AUC of Model B |
|
|---|---|---|---|---|---|
| Training | Model 4 | Model 1 | 0.925 | 0.894 | 0.033 |
| Model 4 | Model 2 | 0.925 | 0.909 | 0.280 | |
| Model 4 | Model 3 | 0.925 | 0.914 | 0.308 | |
| Model 1 | Model 2 | 0.894 | 0.909 | 0.374 | |
| Model 1 | Model 3 | 0.894 | 0.914 | 0.190 | |
| Model 2 | Model 3 | 0.909 | 0.914 | 0.704 | |
| Validation | Model 4 | Model 1 | 0.897 | 0.866 | 0.104 |
| Model 4 | Model 2 | 0.897 | 0.892 | 0.878 | |
| Model 4 | Model 3 | 0.897 | 0.892 | 0.826 | |
| Model 1 | Model 2 | 0.866 | 0.892 | 0.422 | |
| Model 1 | Model 3 | 0.866 | 0.892 | 0.319 | |
| Model 2 | Model 3 | 0.892 | 0.892 | 1.000 |
AUC, area under the receiver operating characteristic curve; Model 4, Clinic + CTU + CTA + CTV; Model 1, Clinic + CTU; Model 2, Clinic + CTA; Model 3, Clinic + CTV; CTU, CT value of unenhanced; CTA, CT value of arterial phase; CTV, CT value of venous phase.