Literature DB >> 34941903

Loss of YhcB results in dysregulation of coordinated peptidoglycan, LPS and phospholipid synthesis during Escherichia coli cell growth.

Emily C A Goodall1, Georgia L Isom2, Jessica L Rooke1, Karthik Pullela1, Christopher Icke1, Zihao Yang1, Gabriela Boelter2, Alun Jones1, Isabel Warner1, Rochelle Da Costa1, Bing Zhang1, James Rae1, Wee Boon Tan3, Matthias Winkle4, Antoine Delhaye5, Eva Heinz6, Jean-Francois Collet5, Adam F Cunningham2, Mark A Blaskovich1, Robert G Parton1,7, Jeff A Cole2, Manuel Banzhaf2, Shu-Sin Chng3, Waldemar Vollmer4, Jack A Bryant2, Ian R Henderson1.   

Abstract

The cell envelope is essential for viability in all domains of life. It retains enzymes and substrates within a confined space while providing a protective barrier to the external environment. Destabilising the envelope of bacterial pathogens is a common strategy employed by antimicrobial treatment. However, even in one of the best studied organisms, Escherichia coli, there remain gaps in our understanding of how the synthesis of the successive layers of the cell envelope are coordinated during growth and cell division. Here, we used a whole-genome phenotypic screen to identify mutants with a defective cell envelope. We report that loss of yhcB, a conserved gene of unknown function, results in loss of envelope stability, increased cell permeability and dysregulated control of cell size. Using whole genome transposon mutagenesis strategies, we report the comprehensive genetic interaction network of yhcB, revealing all genes with a synthetic negative and a synthetic positive relationship. These genes include those previously reported to have a role in cell envelope biogenesis. Surprisingly, we identified genes previously annotated as essential that became non-essential in a ΔyhcB background. Subsequent analyses suggest that YhcB functions at the junction of several envelope biosynthetic pathways coordinating the spatiotemporal growth of the cell, highlighting YhcB as an as yet unexplored antimicrobial target.

Entities:  

Mesh:

Substances:

Year:  2021        PMID: 34941903      PMCID: PMC8741058          DOI: 10.1371/journal.pgen.1009586

Source DB:  PubMed          Journal:  PLoS Genet        ISSN: 1553-7390            Impact factor:   5.917


  138 in total

1.  A rapid method of total lipid extraction and purification.

Authors:  E G BLIGH; W J DYER
Journal:  Can J Biochem Physiol       Date:  1959-08

Review 2.  Biogenesis of inner membrane proteins in Escherichia coli.

Authors:  Joen Luirink; Zhong Yu; Samuel Wagner; Jan-Willem de Gier
Journal:  Biochim Biophys Acta       Date:  2011-12-19

Review 3.  Thinking big: the tunability of bacterial cell size.

Authors:  Spencer Cesar; Kerwyn Casey Huang
Journal:  FEMS Microbiol Rev       Date:  2017-09-01       Impact factor: 16.408

4.  Identification of the major penicillin-binding proteins of Escherichia coli as D-alanine carboxypeptidase IA.

Authors:  B G Spratt; J L Strominger
Journal:  J Bacteriol       Date:  1976-07       Impact factor: 3.490

5.  Architectures of Lipid Transport Systems for the Bacterial Outer Membrane.

Authors:  Damian C Ekiert; Gira Bhabha; Georgia L Isom; Garrett Greenan; Sergey Ovchinnikov; Ian R Henderson; Jeffery S Cox; Ronald D Vale
Journal:  Cell       Date:  2017-04-06       Impact factor: 41.582

Review 6.  Lipoproteins and Their Trafficking to the Outer Membrane.

Authors:  Marcin Grabowicz
Journal:  EcoSal Plus       Date:  2019-03

7.  Phosphatidic acid accumulation in the membranes of Escherichia coli mutants defective in CDP-diglyceride synthetase.

Authors:  B R Ganong; J M Leonard; C R Raetz
Journal:  J Biol Chem       Date:  1980-02-25       Impact factor: 5.157

Review 8.  Lipopolysaccharide transport and assembly at the outer membrane: the PEZ model.

Authors:  Suguru Okuda; David J Sherman; Thomas J Silhavy; Natividad Ruiz; Daniel Kahne
Journal:  Nat Rev Microbiol       Date:  2016-03-30       Impact factor: 60.633

9.  ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules.

Authors:  Haim Ashkenazy; Shiran Abadi; Eric Martz; Ofer Chay; Itay Mayrose; Tal Pupko; Nir Ben-Tal
Journal:  Nucleic Acids Res       Date:  2016-05-10       Impact factor: 16.971

10.  Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins.

Authors:  Pingzhao Hu; Sarath Chandra Janga; Mohan Babu; J Javier Díaz-Mejía; Gareth Butland; Wenhong Yang; Oxana Pogoutse; Xinghua Guo; Sadhna Phanse; Peter Wong; Shamanta Chandran; Constantine Christopoulos; Anaies Nazarians-Armavil; Negin Karimi Nasseri; Gabriel Musso; Mehrab Ali; Nazila Nazemof; Veronika Eroukova; Ashkan Golshani; Alberto Paccanaro; Jack F Greenblatt; Gabriel Moreno-Hagelsieb; Andrew Emili
Journal:  PLoS Biol       Date:  2009-04-28       Impact factor: 8.029

View more
  2 in total

1.  A New Factor LapD Is Required for the Regulation of LpxC Amounts and Lipopolysaccharide Trafficking.

Authors:  Alicja Wieczorek; Anna Sendobra; Akshey Maniyeri; Magdalena Sugalska; Gracjana Klein; Satish Raina
Journal:  Int J Mol Sci       Date:  2022-08-26       Impact factor: 6.208

2.  LI-Detector: a Method for Curating Ordered Gene-Replacement Libraries.

Authors:  Emily C A Goodall; Faye C Morris; Samantha A McKeand; Rudi Sullivan; Isabel A Warner; Emma Sheehan; Gabriela Boelter; Christopher Icke; Adam F Cunningham; Jeffrey A Cole; Manuel Banzhaf; Jack A Bryant; Ian R Henderson
Journal:  Microbiol Spectr       Date:  2022-07-20
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.