Literature DB >> 34936882

A census of the lung: CellCards from LungMAP.

Xin Sun1, Anne-Karina Perl2, Rongbo Li3, Sheila M Bell4, Eniko Sajti3, Vladimir V Kalinichenko5, Tanya V Kalin2, Ravi S Misra6, Hitesh Deshmukh2, Geremy Clair7, Jennifer Kyle7, Laura E Crotty Alexander8, Jorge A Masso-Silva8, Joseph A Kitzmiller4, Kathryn A Wikenheiser-Brokamp9, Gail Deutsch10, Minzhe Guo2, Yina Du4, Michael P Morley11, Michael J Valdez3, Haoze V Yu3, Kang Jin12, Eric E Bardes12, Jarod A Zepp13, Terren Neithamer11, Maria C Basil11, William J Zacharias14, Jamie Verheyden3, Randee Young3, Gautam Bandyopadhyay6, Sara Lin15, Charles Ansong7, Joshua Adkins7, Nathan Salomonis16, Bruce J Aronow12, Yan Xu2, Gloria Pryhuber6, Jeff Whitsett2, Edward E Morrisey17.   

Abstract

The human lung plays vital roles in respiration, host defense, and basic physiology. Recent technological advancements such as single-cell RNA sequencing and genetic lineage tracing have revealed novel cell types and enriched functional properties of existing cell types in lung. The time has come to take a new census. Initiated by members of the NHLBI-funded LungMAP Consortium and aided by experts in the lung biology community, we synthesized current data into a comprehensive and practical cellular census of the lung. Identities of cell types in the normal lung are captured in individual cell cards with delineation of function, markers, developmental lineages, heterogeneity, regenerative potential, disease links, and key experimental tools. This publication will serve as the starting point of a live, up-to-date guide for lung research at https://www.lungmap.net/cell-cards/. We hope that Lung CellCards will promote the community-wide effort to establish, maintain, and restore respiratory health.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  COVID; CellCards; LungMAP; cell cards; disease; lung; regeneration; repair; resource; single cell

Mesh:

Year:  2021        PMID: 34936882      PMCID: PMC9202574          DOI: 10.1016/j.devcel.2021.11.007

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   13.417


  299 in total

1.  Early lineage specification defines alveolar epithelial ontogeny in the murine lung.

Authors:  David B Frank; Ian J Penkala; Jarod A Zepp; Aravind Sivakumar; Ricardo Linares-Saldana; William J Zacharias; Katharine G Stolz; Josh Pankin; MinQi Lu; Qiaohong Wang; Apoorva Babu; Li Li; Su Zhou; Michael P Morley; Rajan Jain; Edward E Morrisey
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-19       Impact factor: 11.205

Review 2.  Tissue-Resident Macrophage Ontogeny and Homeostasis.

Authors:  Florent Ginhoux; Martin Guilliams
Journal:  Immunity       Date:  2016-03-15       Impact factor: 31.745

Review 3.  Transcription Factors Regulating Embryonic Development of Pulmonary Vasculature.

Authors:  Craig Bolte; Jeffrey A Whitsett; Tanya V Kalin; Vladimir V Kalinichenko
Journal:  Adv Anat Embryol Cell Biol       Date:  2018       Impact factor: 1.231

4.  Role of lung pericytes and resident fibroblasts in the pathogenesis of pulmonary fibrosis.

Authors:  Chi Hung; Geoffrey Linn; Yu-Hua Chow; Akio Kobayashi; Kristen Mittelsteadt; William A Altemeier; Sina A Gharib; Lynn M Schnapp; Jeremy S Duffield
Journal:  Am J Respir Crit Care Med       Date:  2013-10-01       Impact factor: 21.405

5.  Stromal cells maintain immune cell homeostasis in adipose tissue via production of interleukin-33.

Authors:  T Mahlakõiv; A-L Flamar; L K Johnston; S Moriyama; G G Putzel; P J Bryce; D Artis
Journal:  Sci Immunol       Date:  2019-05-03

6.  Mesenchyme specifies epithelial differentiation in reciprocal recombinants of embryonic lung and trachea.

Authors:  J M Shannon; L D Nielsen; S A Gebb; S H Randell
Journal:  Dev Dyn       Date:  1998-08       Impact factor: 3.780

7.  Single-Cell RNA Sequencing Unveils Unique Transcriptomic Signatures of Organ-Specific Endothelial Cells.

Authors:  David T Paik; Lei Tian; Ian M Williams; Siyeon Rhee; Hao Zhang; Chun Liu; Ridhima Mishra; Sean M Wu; Kristy Red-Horse; Joseph C Wu
Journal:  Circulation       Date:  2020-09-15       Impact factor: 29.690

8.  Spatial-Temporal Lineage Restrictions of Embryonic p63+ Progenitors Establish Distinct Stem Cell Pools in Adult Airways.

Authors:  Ying Yang; Paul Riccio; Michael Schotsaert; Munemasa Mori; Jining Lu; Dong-Kee Lee; Adolfo García-Sastre; Jianming Xu; Wellington V Cardoso
Journal:  Dev Cell       Date:  2018-03-26       Impact factor: 12.270

9.  Foxa3 induces goblet cell metaplasia and inhibits innate antiviral immunity.

Authors:  Gang Chen; Thomas R Korfhagen; Christopher L Karp; Soren Impey; Yan Xu; Scott H Randell; Joseph Kitzmiller; Yutaka Maeda; Hans Michael Haitchi; Anusha Sridharan; Albert P Senft; Jeffrey A Whitsett
Journal:  Am J Respir Crit Care Med       Date:  2014-02-01       Impact factor: 21.405

10.  Repression of hedgehog signaling and BMP4 expression in growth plate cartilage by fibroblast growth factor receptor 3.

Authors:  M C Naski; J S Colvin; J D Coffin; D M Ornitz
Journal:  Development       Date:  1998-12       Impact factor: 6.868

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  4 in total

1.  Decoding the IGF1 signaling gene regulatory network behind alveologenesis from a mouse model of bronchopulmonary dysplasia.

Authors:  Feng Gao; Changgong Li; Susan M Smith; Neil Peinado; Golenaz Kohbodi; Evelyn Tran; Yong-Hwee Eddie Loh; Wei Li; Zea Borok; Parviz Minoo
Journal:  Elife       Date:  2022-10-10       Impact factor: 8.713

Review 2.  Promises and Challenges of Cell-Based Therapies to Promote Lung Regeneration in Idiopathic Pulmonary Fibrosis.

Authors:  Alejandro Egea-Zorrilla; Laura Vera; Borja Saez; Ana Pardo-Saganta
Journal:  Cells       Date:  2022-08-20       Impact factor: 7.666

3.  Pathological MAPK activation-mediated lymphatic basement membrane disruption causes lymphangiectasia that is treatable with ravoxertinib.

Authors:  Harish P Janardhan; Karen Dresser; Lloyd Hutchinson; Chinmay M Trivedi
Journal:  JCI Insight       Date:  2022-09-08

4.  Modeling lung diseases using reversibly immortalized mouse pulmonary alveolar type 2 cells (imPAC2).

Authors:  Linghuan Zhang; Wenping Luo; Jiang Liu; Maozhu Xu; Qi Peng; Wenjing Zou; Jingyi You; Yi Shu; Piao Zhao; William Wagstaff; Guozhi Zhao; Kevin Qin; Rex C Haydon; Hue H Luu; Russell R Reid; Yang Bi; Tianyu Zhao; Tong-Chuan He; Zhou Fu
Journal:  Cell Biosci       Date:  2022-09-22       Impact factor: 9.584

  4 in total

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