Literature DB >> 34935498

Rapid Mounting of Zebrafish Larvae for Brain Imaging.

Yijie Geng1, Randall T Peterson1.   

Abstract

Brain imaging requires mounting of zebrafish larvae in a vertical position, but anesthetized or fixed larvae tend to fall on their sides without external support. Current solution is to manually hold individual larva until liquid agarose solidifies, which is time consuming, labor intensive, and unfriendly to beginners. We developed a method to form larva-shaped slots in agarose gel using a computer numerical controlled manufactured mold. Each slot nearly perfectly fits a larva in its upright position, and larvae can be easily mounted by inserting into the slots. On average, each larva can be mounted in <1 min using this method.

Entities:  

Keywords:  brain imaging; computer numerical control; rapid mounting

Mesh:

Year:  2021        PMID: 34935498      PMCID: PMC8716516          DOI: 10.1089/zeb.2021.0062

Source DB:  PubMed          Journal:  Zebrafish        ISSN: 1545-8547            Impact factor:   1.985


  8 in total

1.  Brain-wide neuronal dynamics during motor adaptation in zebrafish.

Authors:  Misha B Ahrens; Jennifer M Li; Michael B Orger; Drew N Robson; Alexander F Schier; Florian Engert; Ruben Portugues
Journal:  Nature       Date:  2012-05-09       Impact factor: 49.962

2.  Whole-brain activity maps reveal stereotyped, distributed networks for visuomotor behavior.

Authors:  Ruben Portugues; Claudia E Feierstein; Florian Engert; Michael B Orger
Journal:  Neuron       Date:  2014-03-19       Impact factor: 17.173

3.  Phenotypic Landscape of Schizophrenia-Associated Genes Defines Candidates and Their Shared Functions.

Authors:  Summer B Thyme; Lindsey M Pieper; Eric H Li; Shristi Pandey; Yiqun Wang; Nathan S Morris; Carrie Sha; Joo Won Choi; Kristian J Herrera; Edward R Soucy; Steve Zimmerman; Owen Randlett; Joel Greenwood; Steven A McCarroll; Alexander F Schier
Journal:  Cell       Date:  2019-03-28       Impact factor: 41.582

4.  A Cellular-Resolution Atlas of the Larval Zebrafish Brain.

Authors:  Michael Kunst; Eva Laurell; Nouwar Mokayes; Anna Kramer; Fumi Kubo; António M Fernandes; Dominique Förster; Marco Dal Maschio; Herwig Baier
Journal:  Neuron       Date:  2019-05-27       Impact factor: 17.173

5.  Comparative analysis of fixation and embedding techniques for optimized histological preparation of zebrafish.

Authors:  Jean E Copper; Lynn R Budgeon; Christina A Foutz; Damian B van Rossum; Daniel J Vanselow; Margaret J Hubley; Darin P Clark; David T Mandrell; Keith C Cheng
Journal:  Comp Biochem Physiol C Toxicol Pharmacol       Date:  2017-11-20       Impact factor: 3.228

6.  Morphometric analysis and neuroanatomical mapping of the zebrafish brain.

Authors:  Tripti Gupta; Gregory D Marquart; Eric J Horstick; Kathryn M Tabor; Sinisa Pajevic; Harold A Burgess
Journal:  Methods       Date:  2018-06-21       Impact factor: 3.608

7.  High-precision registration between zebrafish brain atlases using symmetric diffeomorphic normalization.

Authors:  Gregory D Marquart; Kathryn M Tabor; Eric J Horstick; Mary Brown; Alexandra K Geoca; Nicholas F Polys; Damian Dalle Nogare; Harold A Burgess
Journal:  Gigascience       Date:  2017-08-01       Impact factor: 6.524

8.  Whole-brain activity mapping onto a zebrafish brain atlas.

Authors:  Owen Randlett; Caroline L Wee; Eva A Naumann; Onyeka Nnaemeka; David Schoppik; James E Fitzgerald; Ruben Portugues; Alix M B Lacoste; Clemens Riegler; Florian Engert; Alexander F Schier
Journal:  Nat Methods       Date:  2015-11       Impact factor: 28.547

  8 in total

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