Literature DB >> 34932942

Individual variability of neural computations in the primate retina.

Nishal P Shah1, Nora Brackbill2, Ryan Samarakoon3, Colleen Rhoades4, Alexandra Kling3, Alexander Sher5, Alan Litke5, Yoram Singer6, Jonathon Shlens7, E J Chichilnisky3.   

Abstract

Variation in the neural code contributes to making each individual unique. We probed neural code variation using ∼100 population recordings from major ganglion cell types in the macaque retina, combined with an interpretable computational representation of individual variability. This representation captured variation and covariation in properties such as nonlinearity, temporal dynamics, and spatial receptive field size and preserved invariances such as asymmetries between On and Off cells. The covariation of response properties in different cell types was associated with the proximity of lamination of their synaptic input. Surprisingly, male retinas exhibited higher firing rates and faster temporal integration than female retinas. Exploiting data from previously recorded retinas enabled efficient characterization of a new macaque retina, and of a human retina. Simulations indicated that combining a large dataset of retinal recordings with behavioral feedback could reveal the neural code in a living human and thus improve vision restoration with retinal implants.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  artificial intelligence; artificial retina; encoding models; individual variability; machine learning; neural prosthesis; response modeling; retina; sensory encoding; vision

Mesh:

Year:  2021        PMID: 34932942      PMCID: PMC8857061          DOI: 10.1016/j.neuron.2021.11.026

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   18.688


  23 in total

1.  Visual transduction in cones of the monkey Macaca fascicularis.

Authors:  J L Schnapf; B J Nunn; M Meister; D A Baylor
Journal:  J Physiol       Date:  1990-08       Impact factor: 5.182

2.  Fidelity of the ensemble code for visual motion in primate retina.

Authors:  E S Frechette; A Sher; M I Grivich; D Petrusca; A M Litke; E J Chichilnisky
Journal:  J Neurophysiol       Date:  2004-12-29       Impact factor: 2.714

Review 3.  Information processing in the primate retina: circuitry and coding.

Authors:  G D Field; E J Chichilnisky
Journal:  Annu Rev Neurosci       Date:  2007       Impact factor: 12.449

4.  Combining decoder design and neural adaptation in brain-machine interfaces.

Authors:  Krishna V Shenoy; Jose M Carmena
Journal:  Neuron       Date:  2014-11-19       Impact factor: 17.173

5.  A polyaxonal amacrine cell population in the primate retina.

Authors:  Martin Greschner; Greg D Field; Peter H Li; Max L Schiff; Jeffrey L Gauthier; Daniel Ahn; Alexander Sher; Alan M Litke; E J Chichilnisky
Journal:  J Neurosci       Date:  2014-03-05       Impact factor: 6.167

Review 6.  Sex differences in the brain: Implications for behavioral and biomedical research.

Authors:  Elena Choleris; Liisa A M Galea; Farida Sohrabji; Karyn M Frick
Journal:  Neurosci Biobehav Rev       Date:  2018-02       Impact factor: 8.989

7.  Deep Learning Models of the Retinal Response to Natural Scenes.

Authors:  Lane T McIntosh; Niru Maheswaranathan; Aran Nayebi; Surya Ganguli; Stephen A Baccus
Journal:  Adv Neural Inf Process Syst       Date:  2016

8.  Efficient Coding by Midget and Parasol Ganglion Cells in the Human Retina.

Authors:  Florentina Soto; Jen-Chun Hsiang; Rithwick Rajagopal; Kisha Piggott; George J Harocopos; Steven M Couch; Philip Custer; Josh L Morgan; Daniel Kerschensteiner
Journal:  Neuron       Date:  2020-06-12       Impact factor: 17.173

9.  Application of the hierarchical bootstrap to multi-level data in neuroscience.

Authors:  Varun Saravanan; Gordon J Berman; Samuel J Sober
Journal:  Neuron Behav Data Anal Theory       Date:  2020-07-21

Review 10.  Restoring sensorimotor function through intracortical interfaces: progress and looming challenges.

Authors:  Sliman J Bensmaia; Lee E Miller
Journal:  Nat Rev Neurosci       Date:  2014-05       Impact factor: 34.870

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