Literature DB >> 34932160

Plant-growth-promoting Caulobacter strains isolated from distinct plant hosts share conserved genetic factors involved in beneficial plant-bacteria interactions.

Louis Berrios1,2.   

Abstract

The genus Caulobacter encompasses several strains that can enhance the biomass of several plant species. However, for many plant-growth-promoting (PGP) Caulobacter strains, their genomic factors that facilitate positive interactions with their plant hosts remain unknown. Given that leveraging comparative genomics analyses can establish a framework to understand these plant-bacteria interactions, the genomes of three PGP Caulobacter strains that were isolated from distinct geographical locations and have been shown to associate with distinct plant species were compared. Using previously reported analyses to contextualize the genomic patterns among PGP Caulobacter strains, each of these PGP Caulobacter strains (CBR1, RHG1, and RHGG3) was observed harboring similar metabolic potentials and previously reported PGP genetic factors in their genomes. Together, these findings reinforce previous analyses that identify the cyo operon as a general PGP factor for Caulobacter strains while establishing a framework for further investigations that seek to uncover the mechanistic details that govern interactions between Caulobacter strains and diverse plant species.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Caulobacter; Comparative genomics; Metabolic pathways; Plant-growth-promoting bacteria

Mesh:

Year:  2021        PMID: 34932160     DOI: 10.1007/s00203-021-02702-y

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  19 in total

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2.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

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3.  The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.

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Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

4.  The Isolation and Characterization of Kronos, a Novel Caulobacter Rhizosphere Phage that is Similar to Lambdoid Phages.

Authors:  Louis Berrios; Bert Ely
Journal:  Curr Microbiol       Date:  2019-02-27       Impact factor: 2.188

5.  The role of cellulose and O-antigen capsule in the colonization of plants by Salmonella enterica.

Authors:  Jeri D Barak; Courtney E Jahn; Deanna L Gibson; Amy O Charkowski
Journal:  Mol Plant Microbe Interact       Date:  2007-09       Impact factor: 4.171

6.  antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification.

Authors:  Kai Blin; Thomas Wolf; Marc G Chevrette; Xiaowen Lu; Christopher J Schwalen; Satria A Kautsar; Hernando G Suarez Duran; Emmanuel L C de Los Santos; Hyun Uk Kim; Mariana Nave; Jeroen S Dickschat; Douglas A Mitchell; Ekaterina Shelest; Rainer Breitling; Eriko Takano; Sang Yup Lee; Tilmann Weber; Marnix H Medema
Journal:  Nucleic Acids Res       Date:  2017-07-03       Impact factor: 16.971

7.  Genome-wide identification of bacterial plant colonization genes.

Authors:  Benjamin J Cole; Meghan E Feltcher; Robert J Waters; Kelly M Wetmore; Tatiana S Mucyn; Elizabeth M Ryan; Gaoyan Wang; Sabah Ul-Hasan; Meredith McDonald; Yasuo Yoshikuni; Rex R Malmstrom; Adam M Deutschbauer; Jeffery L Dangl; Axel Visel
Journal:  PLoS Biol       Date:  2017-09-22       Impact factor: 8.029

8.  Cycad Coralloid Roots Contain Bacterial Communities Including Cyanobacteria and Caulobacter spp. That Encode Niche-Specific Biosynthetic Gene Clusters.

Authors:  Karina Gutiérrez-García; Edder D Bustos-Díaz; José Antonio Corona-Gómez; Hilda E Ramos-Aboites; Nelly Sélem-Mojica; Pablo Cruz-Morales; Miguel A Pérez-Farrera; Francisco Barona-Gómez; Angélica Cibrián-Jaramillo
Journal:  Genome Biol Evol       Date:  2019-01-01       Impact factor: 3.416

9.  Genes related to redox and cell curvature facilitate interactions between Caulobacter strains and Arabidopsis.

Authors:  Louis Berrios; Bert Ely
Journal:  PLoS One       Date:  2021-04-01       Impact factor: 3.240

Review 10.  Specificity of plant-microbe interactions in the tree mycorrhizosphere biome and consequences for soil C cycling.

Authors:  Carolyn Churchland; Sue J Grayston
Journal:  Front Microbiol       Date:  2014-06-03       Impact factor: 5.640

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  1 in total

Review 1.  Current Techniques to Study Beneficial Plant-Microbe Interactions.

Authors:  Elisa Gamalero; Elisa Bona; Bernard R Glick
Journal:  Microorganisms       Date:  2022-07-08
  1 in total

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