Literature DB >> 34928793

Deep-E: A Fully-Dense Neural Network for Improving the Elevation Resolution in Linear-Array-Based Photoacoustic Tomography.

Huijuan Zhang, Wei Bo, Depeng Wang, Anthony DiSpirito, Chuqin Huang, Nikhila Nyayapathi, Emily Zheng, Tri Vu, Yiyang Gong, Junjie Yao, Wenyao Xu, Jun Xia.   

Abstract

Linear-array-based photoacoustic tomography has shown broad applications in biomedical research and preclinical imaging. However, the elevational resolution of a linear array is fundamentally limited due to the weak cylindrical focus of the transducer element. While several methods have been proposed to address this issue, they have all handled the problem in a less time-efficient way. In this work, we propose to improve the elevational resolution of a linear array through Deep-E, a fully dense neural network based on U-net. Deep-E exhibits high computational efficiency by converting the three-dimensional problem into a two-dimension problem: it focused on training a model to enhance the resolution along elevational direction by only using the 2D slices in the axial and elevational plane and thereby reducing the computational burden in simulation and training. We demonstrated the efficacy of Deep-E using various datasets, including simulation, phantom, and human subject results. We found that Deep-E could improve elevational resolution by at least four times and recover the object's true size. We envision that Deep-E will have a significant impact in linear-array-based photoacoustic imaging studies by providing high-speed and high-resolution image enhancement.

Entities:  

Mesh:

Year:  2022        PMID: 34928793      PMCID: PMC9161237          DOI: 10.1109/TMI.2021.3137060

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   11.037


  36 in total

1.  Dual Scan Mammoscope (DSM)-A New Portable Photoacoustic Breast Imaging System With Scanning in Craniocaudal Plane.

Authors:  Nikhila Nyayapathi; Rachel Lim; Huijuan Zhang; Wenhan Zheng; Yuehang Wang; Melinda Tiao; Kwang W Oh; X Cynthia Fan; Ermelinda Bonaccio; Kazuaki Takabe; Jun Xia
Journal:  IEEE Trans Biomed Eng       Date:  2019-08-19       Impact factor: 4.538

2.  Photoacoustic tomography: principles and advances.

Authors:  Jun Xia; Junjie Yao; Lihong V Wang
Journal:  Electromagn Waves (Camb)       Date:  2014

3.  Fully Dense UNet for 2-D Sparse Photoacoustic Tomography Artifact Removal.

Authors:  Steven Guan; Amir A Khan; Siddhartha Sikdar; Parag V Chitnis
Journal:  IEEE J Biomed Health Inform       Date:  2019-04-23       Impact factor: 5.772

4.  Hybrid deep learning network for vascular segmentation in photoacoustic imaging.

Authors:  Alan Yilun Yuan; Yang Gao; Liangliang Peng; Lingxiao Zhou; Jun Liu; Siwei Zhu; Wei Song
Journal:  Biomed Opt Express       Date:  2020-10-16       Impact factor: 3.732

5.  Isotropic high resolution optoacoustic imaging with linear detector arrays in bi-directional scanning.

Authors:  Mathias Schwarz; Andreas Buehler; Vasilis Ntziachristos
Journal:  J Biophotonics       Date:  2014-04-15       Impact factor: 3.207

6.  A New Deep Learning Network for Mitigating Limited-view and Under-sampling Artifacts in Ring-shaped Photoacoustic Tomography.

Authors:  Huijuan Zhang; Hongyu Li; Nikhila Nyayapathi; Depeng Wang; Alisa Le; Leslie Ying; Jun Xia
Journal:  Comput Med Imaging Graph       Date:  2020-06-25       Impact factor: 4.790

7.  Development of a digital breast phantom for photoacoustic computed tomography.

Authors:  Youwei Bao; Handi Deng; Xuanhao Wang; Hongzhi Zuo; Cheng Ma
Journal:  Biomed Opt Express       Date:  2021-02-10       Impact factor: 3.732

8.  A generative adversarial network for artifact removal in photoacoustic computed tomography with a linear-array transducer.

Authors:  Tri Vu; Mucong Li; Hannah Humayun; Yuan Zhou; Junjie Yao
Journal:  Exp Biol Med (Maywood)       Date:  2020-03-25

Review 9.  Review of deep learning for photoacoustic imaging.

Authors:  Changchun Yang; Hengrong Lan; Feng Gao; Fei Gao
Journal:  Photoacoustics       Date:  2020-12-29

10.  Deep learning in photoacoustic imaging: a review.

Authors:  Handi Deng; Hui Qiao; Qionghai Dai; Cheng Ma
Journal:  J Biomed Opt       Date:  2021-04       Impact factor: 3.170

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  1 in total

1.  Semantic segmentation of multispectral photoacoustic images using deep learning.

Authors:  Melanie Schellenberg; Kris K Dreher; Niklas Holzwarth; Fabian Isensee; Annika Reinke; Nicholas Schreck; Alexander Seitel; Minu D Tizabi; Lena Maier-Hein; Janek Gröhl
Journal:  Photoacoustics       Date:  2022-03-05
  1 in total

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