Literature DB >> 34923394

Dynamic interaction network involving the conserved intrinsically disordered regions in human eIF5.

Eleanor Elise Paul1, Kay Ying Lin1, Nathan Gamble1, Amy Wei-Lun Tsai1, Simon H K Swan1, Yu Yang1, Matthew Doran1, Assen Marintchev2.   

Abstract

Translation initiation in eukaryotes requires multiple eukaryotic translation initiation factors (eIFs) and involves continuous remodeling of the ribosomal preinitiation complex (PIC). The GTPase eIF2 brings the initiator Met-tRNAi to the PIC. Upon start codon selection and GTP hydrolysis, promoted by eIF5, eIF2-GDP is released in complex with eIF5. Here, we report that two intrinsically disordered regions (IDRs) in eIF5, the DWEAR motif and the C-terminal tail (CTT) dynamically contact the folded C-terminal domain (CTD) and compete with each other. The eIF5-CTD•CTT interaction favors eIF2β binding to eIF5-CTD, whereas the eIF5-CTD•DWEAR interaction favors eIF1A binding, which suggests how intramolecular contact rearrangement could play a role in PIC remodeling. We show that eIF5 phosphorylation by CK2, which is known to stimulate translation and cell proliferation, significantly increases the eIF5 affinity for eIF2. Our results also indicate that the eIF2β subunit has at least two, and likely three eIF5-binding sites.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Dynamic interactions; Intrinsically disordered region (IDR); NMR; Protein-protein interactions; Translation initiation; eIF5

Mesh:

Substances:

Year:  2021        PMID: 34923394      PMCID: PMC8741751          DOI: 10.1016/j.bpc.2021.106740

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  36 in total

1.  An eIF5/eIF2 complex antagonizes guanine nucleotide exchange by eIF2B during translation initiation.

Authors:  Chingakham Ranjit Singh; Bumjun Lee; Tsuyoshi Udagawa; Sarah S Mohammad-Qureshi; Yasufumi Yamamoto; Graham D Pavitt; Katsura Asano
Journal:  EMBO J       Date:  2006-09-21       Impact factor: 11.598

2.  NMR methods for studying protein-protein interactions involved in translation initiation.

Authors:  Assen Marintchev; Dominique Frueh; Gerhard Wagner
Journal:  Methods Enzymol       Date:  2007       Impact factor: 1.600

3.  The crystal structure of the carboxy-terminal domain of human translation initiation factor eIF5.

Authors:  Christoph Bieniossek; Patrick Schütz; Mario Bumann; Andreas Limacher; Isabel Uson; Ulrich Baumann
Journal:  J Mol Biol       Date:  2006-05-24       Impact factor: 5.469

Review 4.  The mechanism of eukaryotic translation initiation and principles of its regulation.

Authors:  Richard J Jackson; Christopher U T Hellen; Tatyana V Pestova
Journal:  Nat Rev Mol Cell Biol       Date:  2010-02       Impact factor: 94.444

Review 5.  The scanning mechanism of eukaryotic translation initiation.

Authors:  Alan G Hinnebusch
Journal:  Annu Rev Biochem       Date:  2014-01-29       Impact factor: 23.643

6.  eIF3 Peripheral Subunits Rearrangement after mRNA Binding and Start-Codon Recognition.

Authors:  Angelita Simonetti; Jailson Brito Querido; Alexander G Myasnikov; Eder Mancera-Martinez; Adeline Renaud; Lauriane Kuhn; Yaser Hashem
Journal:  Mol Cell       Date:  2016-06-30       Impact factor: 17.970

7.  Novel mechanisms of eIF2B action and regulation by eIF2α phosphorylation.

Authors:  Andrew M Bogorad; Kai Ying Lin; Assen Marintchev
Journal:  Nucleic Acids Res       Date:  2017-11-16       Impact factor: 16.971

8.  Structure of a human cap-dependent 48S translation pre-initiation complex.

Authors:  Boris Eliseev; Lahari Yeramala; Alexander Leitner; Manikandan Karuppasamy; Etienne Raimondeau; Karine Huard; Elena Alkalaeva; Ruedi Aebersold; Christiane Schaffitzel
Journal:  Nucleic Acids Res       Date:  2018-03-16       Impact factor: 16.971

9.  Structure of a human 48S translational initiation complex.

Authors:  Jailson Brito Querido; Masaaki Sokabe; Sebastian Kraatz; Yuliya Gordiyenko; J Mark Skehel; Christopher S Fraser; V Ramakrishnan
Journal:  Science       Date:  2020-09-04       Impact factor: 63.714

10.  Competition between translation initiation factor eIF5 and its mimic protein 5MP determines non-AUG initiation rate genome-wide.

Authors:  Leiming Tang; Jacob Morris; Ji Wan; Chelsea Moore; Yoshihiko Fujita; Sarah Gillaspie; Eric Aube; Jagpreet Nanda; Maud Marques; Maika Jangal; Abbey Anderson; Christian Cox; Hiroyuki Hiraishi; Leiming Dong; Hirohide Saito; Chingakham Ranjit Singh; Michael Witcher; Ivan Topisirovic; Shu-Bing Qian; Katsura Asano
Journal:  Nucleic Acids Res       Date:  2017-11-16       Impact factor: 16.971

View more
  2 in total

Review 1.  The metaphorical swiss army knife: The multitude and diverse roles of HEAT domains in eukaryotic translation initiation.

Authors:  Daniel Friedrich; Assen Marintchev; Haribabu Arthanari
Journal:  Nucleic Acids Res       Date:  2022-06-10       Impact factor: 19.160

2.  Regulation of the interactions between human eIF5 and eIF1A by the CK2 kinase.

Authors:  Nathan Gamble; Eleanor Elise Paul; Bibin Anand; Assen Marintchev
Journal:  Curr Res Struct Biol       Date:  2022-09-13
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.