Literature DB >> 34921638

Evolving features of human cortical development and the emerging roles of non-coding RNAs in neural progenitor cell diversity and function.

Kanella Prodromidou1, Rebecca Matsas2.   

Abstract

The human cerebral cortex is a uniquely complex structure encompassing an unparalleled diversity of neuronal types and subtypes. These arise during development through a series of evolutionary conserved processes, such as progenitor cell proliferation, migration and differentiation, incorporating human-associated adaptations including a protracted neurogenesis and the emergence of novel highly heterogeneous progenitor populations. Disentangling the unique features of human cortical development involves elucidation of the intricate developmental cell transitions orchestrated by progressive molecular events. Crucially, developmental timing controls the fine balance between cell cycle progression/exit and the neurogenic competence of precursor cells, which undergo morphological transitions coupled to transcriptome-defined temporal states. Recent advances in bulk and single-cell transcriptomic technologies suggest that alongside protein-coding genes, non-coding RNAs exert important regulatory roles in these processes. Interestingly, a considerable number of novel long non-coding RNAs (lncRNAs) and microRNAs (miRNAs) have appeared in human and non-human primates suggesting an evolutionary role in shaping cortical development. Here, we present an overview of human cortical development and highlight the marked diversification and complexity of human neuronal progenitors. We further discuss how lncRNAs and miRNAs constitute critical components of the extended epigenetic regulatory network defining intermediate states of progenitors and controlling cell cycle dynamics and fate choices with spatiotemporal precision, during human neurodevelopment.
© 2021. The Author(s), under exclusive licence to Springer Nature Switzerland AG.

Entities:  

Keywords:  Epitranscriptomics; Evolution; Long non-coding RNAs; Neurogenesis; Single-cell RNA sequencing; miRNAs

Mesh:

Substances:

Year:  2021        PMID: 34921638     DOI: 10.1007/s00018-021-04063-7

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  164 in total

1.  Specific expression of long noncoding RNAs in the mouse brain.

Authors:  Tim R Mercer; Marcel E Dinger; Susan M Sunkin; Mark F Mehler; John S Mattick
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-09       Impact factor: 11.205

2.  Transcriptome sequencing during mouse brain development identifies long non-coding RNAs functionally involved in neurogenic commitment.

Authors:  Julieta Aprea; Silvia Prenninger; Martina Dori; Tanay Ghosh; Laura Sebastian Monasor; Elke Wessendorf; Sara Zocher; Simone Massalini; Dimitra Alexopoulou; Mathias Lesche; Andreas Dahl; Matthias Groszer; Michael Hiller; Federico Calegari
Journal:  EMBO J       Date:  2013-11-15       Impact factor: 11.598

Review 3.  Development and evolution of the human neocortex.

Authors:  Jan H Lui; David V Hansen; Arnold R Kriegstein
Journal:  Cell       Date:  2011-07-08       Impact factor: 41.582

Review 4.  Long non-coding RNAs in nervous system function and disease.

Authors:  Irfan A Qureshi; John S Mattick; Mark F Mehler
Journal:  Brain Res       Date:  2010-04-07       Impact factor: 3.252

Review 5.  Learning about cell lineage, cellular diversity and evolution of the human brain through stem cell models.

Authors:  Romain Le Bail; Antonela Bonafina; Ira Espuny-Camacho; Laurent Nguyen
Journal:  Curr Opin Neurobiol       Date:  2020-11-24       Impact factor: 6.627

Review 6.  Generating neuronal diversity in the mammalian cerebral cortex.

Authors:  Simona Lodato; Paola Arlotta
Journal:  Annu Rev Cell Dev Biol       Date:  2015-09-11       Impact factor: 13.827

7.  Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain.

Authors:  Blue B Lake; Rizi Ai; Gwendolyn E Kaeser; Neeraj S Salathia; Yun C Yung; Rui Liu; Andre Wildberg; Derek Gao; Ho-Lim Fung; Song Chen; Raakhee Vijayaraghavan; Julian Wong; Allison Chen; Xiaoyan Sheng; Fiona Kaper; Richard Shen; Mostafa Ronaghi; Jian-Bing Fan; Wei Wang; Jerold Chun; Kun Zhang
Journal:  Science       Date:  2016-06-24       Impact factor: 47.728

8.  The transcriptional landscape of the mammalian genome.

Authors:  P Carninci; T Kasukawa; S Katayama; J Gough; M C Frith; N Maeda; R Oyama; T Ravasi; B Lenhard; C Wells; R Kodzius; K Shimokawa; V B Bajic; S E Brenner; S Batalov; A R R Forrest; M Zavolan; M J Davis; L G Wilming; V Aidinis; J E Allen; A Ambesi-Impiombato; R Apweiler; R N Aturaliya; T L Bailey; M Bansal; L Baxter; K W Beisel; T Bersano; H Bono; A M Chalk; K P Chiu; V Choudhary; A Christoffels; D R Clutterbuck; M L Crowe; E Dalla; B P Dalrymple; B de Bono; G Della Gatta; D di Bernardo; T Down; P Engstrom; M Fagiolini; G Faulkner; C F Fletcher; T Fukushima; M Furuno; S Futaki; M Gariboldi; P Georgii-Hemming; T R Gingeras; T Gojobori; R E Green; S Gustincich; M Harbers; Y Hayashi; T K Hensch; N Hirokawa; D Hill; L Huminiecki; M Iacono; K Ikeo; A Iwama; T Ishikawa; M Jakt; A Kanapin; M Katoh; Y Kawasawa; J Kelso; H Kitamura; H Kitano; G Kollias; S P T Krishnan; A Kruger; S K Kummerfeld; I V Kurochkin; L F Lareau; D Lazarevic; L Lipovich; J Liu; S Liuni; S McWilliam; M Madan Babu; M Madera; L Marchionni; H Matsuda; S Matsuzawa; H Miki; F Mignone; S Miyake; K Morris; S Mottagui-Tabar; N Mulder; N Nakano; H Nakauchi; P Ng; R Nilsson; S Nishiguchi; S Nishikawa; F Nori; O Ohara; Y Okazaki; V Orlando; K C Pang; W J Pavan; G Pavesi; G Pesole; N Petrovsky; S Piazza; J Reed; J F Reid; B Z Ring; M Ringwald; B Rost; Y Ruan; S L Salzberg; A Sandelin; C Schneider; C Schönbach; K Sekiguchi; C A M Semple; S Seno; L Sessa; Y Sheng; Y Shibata; H Shimada; K Shimada; D Silva; B Sinclair; S Sperling; E Stupka; K Sugiura; R Sultana; Y Takenaka; K Taki; K Tammoja; S L Tan; S Tang; M S Taylor; J Tegner; S A Teichmann; H R Ueda; E van Nimwegen; R Verardo; C L Wei; K Yagi; H Yamanishi; E Zabarovsky; S Zhu; A Zimmer; W Hide; C Bult; S M Grimmond; R D Teasdale; E T Liu; V Brusic; J Quackenbush; C Wahlestedt; J S Mattick; D A Hume; C Kai; D Sasaki; Y Tomaru; S Fukuda; M Kanamori-Katayama; M Suzuki; J Aoki; T Arakawa; J Iida; K Imamura; M Itoh; T Kato; H Kawaji; N Kawagashira; T Kawashima; M Kojima; S Kondo; H Konno; K Nakano; N Ninomiya; T Nishio; M Okada; C Plessy; K Shibata; T Shiraki; S Suzuki; M Tagami; K Waki; A Watahiki; Y Okamura-Oho; H Suzuki; J Kawai; Y Hayashizaki
Journal:  Science       Date:  2005-09-02       Impact factor: 47.728

Review 9.  Cell cycle regulation of proliferation versus differentiation in the central nervous system.

Authors:  Laura J A Hardwick; Fahad R Ali; Roberta Azzarelli; Anna Philpott
Journal:  Cell Tissue Res       Date:  2014-05-25       Impact factor: 5.249

10.  Species-Specific miRNAs in Human Brain Development and Disease.

Authors:  Kanella Prodromidou; Rebecca Matsas
Journal:  Front Cell Neurosci       Date:  2019-12-18       Impact factor: 5.505

View more
  1 in total

1.  miR-409-3p represses Cited2 to refine neocortical layer V projection neuron identity.

Authors:  Nikolaus R Wagner; Ashis Sinha; Verl Siththanandan; Angelica M Kowalchuk; Jessica L MacDonald; Suzanne Tharin
Journal:  Front Neurosci       Date:  2022-09-29       Impact factor: 5.152

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.