| Literature DB >> 34919115 |
Mayla Daiane Correa Molinari1,2, Renata Fuganti-Pagliarini2, Daniel de Amorim Barbosa1,2, Silvana Regina Rockenbach Marin2, Daniel Rockenbach Marin2, Elíbio Leopoldo Rech3, Liliane Marcia Mertz-Henning2, Alexandre Lima Nepomuceno2.
Abstract
Soybean is a key crop in many countries, being used from human food to the animal industry due to its nutritional properties. Financially, the grain chain moves large sums of money into the economy of producing countries. However, like other agricultural commodities around the world, it can have its final yield seriously compromised by abiotic environmental stressors, like drought. As flowers imply in pods and in grains inside it to minimize damages caused by water restriction, researchers have focused on understanding flowering-process related genes and their interactions. Here a review dedicated to the soybean flowering process and gene network involved in it is presented, describing gene interactions and how genes act in this complex mechanism, also ruled by environmental triggers such as day-light and circadian cycle. The objective was to gather information and insights on the soybean flowering process, aiming to provide knowledge useful to assist in the development of drought-tolerant soybean lines, minimizing losses due to delays or anticipation of flowering and, consequently, restraining financial and productivity losses.Entities:
Year: 2021 PMID: 34919115 PMCID: PMC8679260 DOI: 10.1590/1678-4685-GMB-2021-0016
Source DB: PubMed Journal: Genet Mol Biol ISSN: 1415-4757 Impact factor: 1.771
Flowering genes in soybean.
| GENE ID | Genome Wm82.a1.v1 | Genome Wm82.a2.v1 | Annotation | Validation | Phenotype | Relation with | Class | Action | Citation |
|---|---|---|---|---|---|---|---|---|---|
| FDL19 | Glyma19g30230 | Glyma19G122800 | bZIP Transcription Factor FDL19 |
| Early flowering | Photoperiod | Transcription factor | PROMOTER |
|
| FT2a | Glyma16g26660 | Glyma.16G150700 | Protein flowering locus T 2a |
| Late flowering | Photoperiod | Transcription factor | PROMOTER |
|
| FT5a | Glyma16g04830 | Glyma.16G044100 | Protein flowering locus T 5a |
| Late flowering | Photoperiod | Transcription factor | PROMOTER |
|
| AP1a | Glyma16g13070 | Glyma.16G091300 | Apetala-like 1 |
| Early flowering | Photoperiod | Transcription factor | PROMOTER |
|
| SOC1 | Glyma18g45780 | Glyma.18G224500 | Suppressor of overexpression of CO 1 |
| Early flowering | Circadian clock /Photoperiod | Transcription factor | PROMOTER |
|
| SOC1-like | Glyma09g40230 | Glyma.09G266200 | Suppressor of overexpression of CO 1 |
| Early flowering | Circadian clock /Photoperiod | Transcription factor | PROMOTER |
|
| LFY2 | Glyma06g17170 | Glyma.06G163600 | Protein leafy | Up-regulation in GM soybean Overexpressing | Early flowering | Photoperiod | Transcription factor | PROMOTER |
|
| FT1a | Glyma18g53680 | Glyma.18G298900 | Protein flowering locus T 1a |
| Late flowering | Photoperiod | Transcription factor | REPRESSOR |
|
| E1b-like | Glyma18g22670 | Glyma.04G143300 | at1g16640 b3 domain | Soybean mutant | Early flowering | Photoperiod | Transcription factor | REPRESSOR |
|
| FLC | Glyma05g28130 | Glyma.05G148700 | Flowering locus C | Down-regulation in | Early flowering | Autonomous Temperature | Transcription factor | REPRESSOR |
|
| SVP1 | Glyma01g02880 | Glyma.01G023500 | Short Vegetative Phase 1 |
| Early flowering | Photoperiod | Transcription factor | REGULATOR |
|
| CRY1 | Glyma04g11010 | Glyma.04G101500 | Cryptochrome 1 |
| Early flowering | Circadian clock /Photoperiod | Blue-light photoreceptor | PROMOTER |
|
| FKF1 | Glyma05g34530 | Glyma.05G239400 | Flavin-binding kelch repeat f-box protein 1 |
| Increases flowering | Circadian clock /Photoperiod | Blue-light photoreceptor | PROMOTER |
|
| FKF2 | Glyma08g05130 | Glyma.08G046500 | Flavin-binding kelch repeat f-box protein 1 |
| Increases flowering | Circadian clock /Photoperiod | Blue-light photoreceptor | PROMOTER |
|
| ZTL3 | Glyma15g17480 | Glyma.15G162300 | Zeitelupe 3 |
| Late flowering | Photoperiod/Age | Blue-light photoreceptor | REPRESSOR |
|
| PHYB1 | Glyma09g03990 | Glyma.09G035500 | phytochrome b (phyb) |
| Early flowering | Photoperiod | Red-light photoreceptor | PROMOTER |
|
| PHYB1 | Glyma15g14980 | Glyma.15G140000 | phytochrome b (phyb) |
| Early flowering | Photoperiod | Red-light photoreceptor | PROMOTER |
|
| PHY3A3 | Glyma19g41210 | Glyma.19G224200 | phytochrome a (phya) | Soybean mutant | Early flowering | Photoperiod | Red-light photoreceptor | REPRESSOR |
|
| PHYA1 | Glyma10g28170 | Glyma.10G141400 | phytochrome a (phya) | Soybean mutant | Early flowering | Photoperiod | Red-light photoreceptor | REPRESSOR |
|
| PHYA2 | Glyma20g22160 | Glyma.20G090000 | phytochrome a (phya) | Soybean mutant | Early flowering | Photoperiod | Red-light photoreceptor | REPRESSOR |
|
| ELF4 | Glyma18g03130 | Glyma.18G027500 | Early flowering 4 |
| Late flowering | Circadian clock /Photoperiod | Gene effector | REPRESSOR |
|
| CO1a/b | Glyma08g28370 | Glyma.08G255200 | Constans-like 1 |
| Late flowering | Circadian clock /Photoperiod | Gene effector | REPRESSOR |
|
| GIa | Glyma10g36600 | Glyma.10G221500 | Gigantea Ia | Soybean mutant | Early flowering | Circadian clock /Photoperiod | Gene effector | REPRESSOR |
|
| VRN1 | Glyma11g13220 | Glyma.11G124200 | Vernalization 1 | Up-regulation in GM soybean Overexpressing | Late flowering | Photoperiod/ Temperature | Gene effector | REPRESSOR |
|
| FT4 | Glyma08g47810 | Glyma.08G363100 | Flowering locus T 4 |
| Late flowering | Photoperiod | Gene effector | REPRESSOR |
|
| FLD | Glyma02g18610 | Glyma.02G159100 | Flowering locus D |
| Early flowering | Autonomous | histone demethylase | PROMOTER |
|
| FLD | Glyma07g09990 | Glyma.07G090100 | Flowering locus D |
| Early flowering | Autonomous | histone demethylase | PROMOTER |
|
| FLD | Glyma09g31770 | Glyma.09G185800 | Flowering locus D |
| Early flowering | Autonomous | histone demethylase | PROMOTER |
|
| FLD | Glyma06g38600 | Glyma.06G250100 | Flowering locus D |
| Early flowering | Autonomous | histone demethylase | PROMOTER |
|
| PPR37 | Glyma12g07861 | Glyma.12G073900 | Pseudo-response regulator | Edited Soybean Overexpression | Late flowering | Circadian clock /Photoperiod | pseudo-response regulator protein | REPRESSOR |
|
Uppercase GM stands for genetically modified. Lowercase italic Gm stands for Glycine max. FLD stands for Flowering Locus D. bZip stands for Basic LeucineZipperDomain. FDL 19 stands for FD-like 19. DREB1A stands for Dehydration responsive element-binding protein 1A.
Figure 1 -Flowering controlling pathways in soybean. Straight end lines represent repression and arrows represent activation. Red: red-light photoreceptors. Blue: blue-light photoreceptors. Shades of green: flowering promoters. Shades of yellow: flowering repressors. Gray spaced circle represents the nucleus. Dotted small circle represents the central flowering complex. Dotted arrows represent the light spectrum absorbed by the photoreceptors.
Flowering genes in soybean and its relationship with drought-response.
| GENE ID | Validation | Specie | Action | Flowering expected | Drought mechanism | Citation |
|---|---|---|---|---|---|---|
| FDL19 | Overexpression | Soybean | PROMOTER | Early | Escape |
|
| SOC1 | Overexpression |
| PROMOTER | Early | Escape |
|
| PHYB | Overexpression |
| PROMOTER | Early | Escape |
|
| ELF4 | Mutation | Soybean/ | REPRESSOR | Early | Escape |
|
| CRY1 | Mutation |
| PROMOTER | Late | Tolerance |
|
| GIa | Overexpression |
| REPRESSOR | Late | Tolerance |
|