| Literature DB >> 34917021 |
Ana Victoria Marco Hernández1,2, Miguel Tomás Vila1, Alfonso Caro Llopis2,3, Sandra Monfort3, Francisco Martinez2,3.
Abstract
Dominant pathogenic variations in the SCN1A gene are associated with several neuro developmental disorders with or without epilepsy, including Dravet syndrome (DS). Conversely, there are few published cases with homozygous or compound heterozygous variations in the SCN1A gene. Here, we describe two siblings from a consanguineous pedigree with epilepsy phenotype compatible with genetic epilepsy with febrile seizures plus (GEFS+) associated with the homozygous likely pathogenic variant (NM_001165963.1): c.4513A > C (p.Lys1505Gln). Clinical and genetic data were compared to those of other 10 previously published patients with epilepsy and variants in compound heterozygosity or homozygosity in the SCN1A gene. Most patients (11/12) had missense variants. Patients in whom the variants were located at the cytoplasmic or the extracellular domains frequently presented a less severe phenotype than those in whom they are located at the pore-forming domains. Five of the patients (41.7%) meet clinical criteria for Dravet syndrome (DS), one of them associated acute encephalopathy. Other five patients (41.7%) had a phenotype of epilepsy with febrile seizures plus familial origin, while the two remaining (17%) presented focal epileptic seizures. SCN1A-related epilepsies present in most cases an autosomal dominant inheritance; however, there is growing evidence that some genetic variants only manifest clinical symptoms when they are present in both alleles, following an autosomal recessive inheritance.Entities:
Keywords: Dravet syndrome; GEFS+; SCN1A; autosomal recessive inheritance; homozygous
Year: 2021 PMID: 34917021 PMCID: PMC8669891 DOI: 10.3389/fneur.2021.784892
Source DB: PubMed Journal: Front Neurol ISSN: 1664-2295 Impact factor: 4.003
Clinical information on 12 patients with pathogenic or likely pathogenic SCN1A variants with autosomal recessive inheritance NM_001165963.1 (see Figure 2).
| Variant | chr2:166852591T>G | chr2:166915161C>T | c.2768T>G, p.(Ile923Ser) | c.824A >G, p.(Asn275Ser) | ||
| Medical history | None | None | None | None | None | None |
| Family background | Consanguineous ( | Consanguineous | Consanguineous | Consanguineous (first cousins) | ||
| Age al seizure onset | 4 mo | 7 mo | 3 mo | 11 mo | 19 mo | 3 mo |
| Seizure type al onset | FS (20 min) | FS (3 min) | GTCS and PS | GTCS and PS | FS | |
| Seizure types | FS, FSE, GTCS | FS, FSE (30 min) | MS, AS | FS, MS, AS | FS, HCS afebrile and febrile | FS, PS, AS, GTCS |
| Seizure triggers | Fever | Fever | Fever | Fever, LMT, CBZ | ||
| Medication trials | FB, VPA. |
| LMT, CBZ, LEV, TPM, CLB | |||
| Additional clinical features | None | Sensorineural deafness | Weight and height measurements | ADHD | ||
| Intellectual disability | No | No | Yes | Yes | No, learning difficulties, slow reasoning | Borderline, |
| Type of movement disorder/Neurologic examination | None/Normal | None/Normal | “Clumsy” | |||
| Language disturbance | No | No | ||||
| Brain MRI | Normal | Normal | Mild asymmetric widening of the posterior horn of the left ventricle, slight non-specific white matter change in T2 weighted images | Normal | Normal | Normal |
| EEG | Normal | Normal | Generalized epileptiform activity with no distinctive photosensivity | Normal, minor fronto.temporal abnormalities | Normal, diffuse spike-waves in temporal and frontal | |
| Phenotype | GEFS+ | GEFS+ | DS | DS | GEFS+ | GEFS+ |
| Reference | This work | This work | Tuncer et al. ( | Moretti et al. ( | ||
| Patient 7 | Patient 8 | Patient 9 | Patient 10 | Patient 11 | Patient 12 | |
| Variant | chr2:166903459T>C | chr2:166900370G>A | chr2:166856252G>A | chr2:166850711AT>A | ||
| Medical history | None | None | None | |||
| Family background | Parents are first-cousins | Parents are first-cousins | Non-consanguineous parents | Both parents are heterozygous for this variation | ||
| Age al seizure onset | 5 mo | 15 mo | 6 mo | 13 mo | 6 mo | 4 mo |
| Seizure type al onset | FS 10 min | FS 20 min | Febrile GTCS 5 min | FS 10 min | FS | Afebrile left FMS |
| Seizure types | FS, Hemiclonic, GTCS, FSE, AA (atypical absences) | FSE, afebrile GTCS. | FS, Short afebrile focal seizures, night-time S frontal semiology | FS, PS with ASC characterized by behavioral arrest followed by head turning and hemi-clonic jerking | FS, GTCS, afebrile HCS, febrile HCS (5–15 min), MS (“head nodding,” and “jerking of the legs”), PS, SE (>30 min), multiple types S. | FMS, AAS |
| Seizure triggers | CBZ, fever | Fever | Fever | Fever | Fever | Fever |
| Medication trials | CBZ | None | CBZ, LMT, TPM, LEV, STP, VPA, CZ | CBZ, VPA | VPA, LEV, TPM, BZD, FB, P | OXC, FTN, VPA, LEV, FB. |
| Additional clinical features | AE: SE at 2y → F0E0 no eye contact | Hepatomegaly | ||||
| Intellectual disability | Yes, profound learning disability | No | DMD | 5y No | Hyperactive behavior, DMD. | Neuromotor developmental retardation |
| Type of movement disorder/Neurologic examination | Diskinetic movement disorder characterized by mixed spasticity and dystonia | Balance and motor coordination problems | Ataxia | Ataxic walking without support. Hand stereotypic movements | ||
| Language disturbance | After AE: total loss of speech | Meaningless word repetitions | ||||
| Brain MRI | 20 mo: small corpus callosum with markedly delayed myelination and an AC | 15 mo: normal | 8 and 12 y: normal | 4 y: normal | 1 y: normal | Normal |
| EEG | 19 mo: diffusely slow | 15 mo: normal | 14 mo: normal | 1 y: normal | 4 mo: normal | |
| Phenotype | DS | FS+ | FS+ PS | FS+ PS | DS and AE | DS |
| Reference | Brunklaus et al. ( | Khanh Van et al. ( | Aslan et al. ( | |||
AAS, atypical absence seizure; AC, atrophic cerebellum; AE, Acute encephalopathy; AS, absence seizure; ASC, altered state of consciousness; CBZ, carbamazepine; CZ, clobazam; DS, Dravet syndrome; FSE, febrile status epilepticus; FB, fenobarbital; FS, febrile seizures; FTN, fenitoina; GEFS+, genetic epilepsy with febrile seizures plus; GTCS, Generalized tonic-clonic seizure; HCS, hemiclonic seizure; LEV, levetiracetam; LMT, lamotrigine; mo, months; MS, myoclonic seizures; OXC, oxcarbazepine; P, propofol; PS, partial seizure; S, seizure; STP, stiripentol; TPM, topiramato; VPA, valproate; Y, year; w, waves.
Figure 2Schematic representation of the SCN1A gene mutations detected in the 12 patients.
Figure 1Pedigree of the family in which the p.Lys1505Gln variant in the SCN1A gene segregates with GEFS+. Black symbols denote homozygous patients, and dotted symbols denote obligate or confirmed heterozygous healthy carriers. Gray symbols denote patients with FS or FS+.
Genetic information on 12 patients with pathogenic or likely pathogenic SCN1A variants with autosomal recessive inheritance NM_001165963.1.
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| Variant | chr2:166852591 | chr2:166915161 | chr2:166894464 | Chr2: 166908369 | chr2:166903459 | chr2:166900370 | chr2:166856252 | chr2:166850711 |
| Classification | Likely | Pathogenic | Uncertain | Likely | Pathogenic | Uncertain | Likely | Pathogenic |
| Inheritance | Inherited homozygous | Compound heterozygous | Homozygous | Inherited homozygous | Inherited homozygous | Homozygous | Inherited homozygous | |
| ACMG | PM1 moderate, | PM5 very strong, | PM2 moderate, | PM1 moderate, | PM1 strong, | PM2 moderate, | PM1 moderate, | PVS1 very strong, |
| CADD | 28.6 | 29.6/26.9 | 26.9 | 23.1 | 23.7 | 29.6 | 33 | 33 |
| Phenotype | GEFS+ (both) | DS (both) | GEFS+ | GEFS+ | DS (p7) FS (p8) | FS+ PS (both) | DS and AE | DS |
| Reference | This work | Tuncer et al. ( | Moretti et al. ( | Brunklaus et al. ( | Khanh et al. ( | Aslan et al. ( | ||