Literature DB >> 34903892

Discovery of a genetic module essential for assigning left-right asymmetry in humans and ancestral vertebrates.

Emmanuelle Szenker-Ravi1, Tim Ott2, Muznah Khatoo3, Anne Moreau de Bellaing4, Wei Xuan Goh3, Yan Ling Chong5,6, Anja Beckers7,8, Darshini Kannesan3, Guillaume Louvel9,10, Priyanka Anujan5,11, Vydianathan Ravi5, Carine Bonnard12, Sébastien Moutton13, Patric Schoen14, Mélanie Fradin15, Estelle Colin16, André Megarbane17,18, Linda Daou19, Ghassan Chehab19,20, Sylvie Di Filippo21, Caroline Rooryck22, Jean-François Deleuze23, Anne Boland23, Nicolas Arribard24, Rukiye Eker25, Sumanty Tohari5, Alvin Yu-Jin Ng26, Marlène Rio27,28, Chun Teck Lim29,30, Birgit Eisenhaber29,31, Frank Eisenhaber29,31,32, Byrappa Venkatesh5,33, Jeanne Amiel27,34, Hugues Roest Crollius9, Christopher T Gordon34, Achim Gossler7,8, Sudipto Roy5,33,35, Tania Attie-Bitach27,36, Martin Blum37, Patrice Bouvagnet38, Bruno Reversade39,40,41,42.   

Abstract

The vertebrate left-right axis is specified during embryogenesis by a transient organ: the left-right organizer (LRO). Species including fish, amphibians, rodents and humans deploy motile cilia in the LRO to break bilateral symmetry, while reptiles, birds, even-toed mammals and cetaceans are believed to have LROs without motile cilia. We searched for genes whose loss during vertebrate evolution follows this pattern and identified five genes encoding extracellular proteins, including a putative protease with hitherto unknown functions that we named ciliated left-right organizer metallopeptide (CIROP). Here, we show that CIROP is specifically expressed in ciliated LROs. In zebrafish and Xenopus, CIROP is required solely on the left side, downstream of the leftward flow, but upstream of DAND5, the first asymmetrically expressed gene. We further ascertained 21 human patients with loss-of-function CIROP mutations presenting with recessive situs anomalies. Our findings posit the existence of an ancestral genetic module that has twice disappeared during vertebrate evolution but remains essential for distinguishing left from right in humans.
© 2021. The Author(s), under exclusive licence to Springer Nature America, Inc.

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Year:  2021        PMID: 34903892     DOI: 10.1038/s41588-021-00970-4

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   41.307


  60 in total

Review 1.  Disorders of left-right asymmetry: heterotaxy and situs inversus.

Authors:  Mardi J Sutherland; Stephanie M Ware
Journal:  Am J Med Genet C Semin Med Genet       Date:  2009-11-15       Impact factor: 3.908

Review 2.  Making and breaking symmetry in development, growth and disease.

Authors:  Daniel T Grimes
Journal:  Development       Date:  2019-08-15       Impact factor: 6.868

Review 3.  Cilia in Left-Right Symmetry Breaking.

Authors:  Kyosuke Shinohara; Hiroshi Hamada
Journal:  Cold Spring Harb Perspect Biol       Date:  2017-10-03       Impact factor: 10.005

4.  Laterality defects in the national birth defects prevention study (1998-2007): birth prevalence and descriptive epidemiology.

Authors:  Angela E Lin; Sergey Krikov; Tiffany Riehle-Colarusso; Jaime L Frías; John Belmont; Marlene Anderka; Tal Geva; Kelly D Getz; Lorenzo D Botto
Journal:  Am J Med Genet A       Date:  2014-08-06       Impact factor: 2.802

5.  Loss-of-function mutations in the EGF-CFC gene CFC1 are associated with human left-right laterality defects.

Authors:  R N Bamford; E Roessler; R D Burdine; U Saplakoğlu; J dela Cruz; M Splitt; J A Goodship; J Towbin; P Bowers; G B Ferrero; B Marino; A F Schier; M M Shen; M Muenke; B Casey
Journal:  Nat Genet       Date:  2000-11       Impact factor: 38.330

Review 6.  Left-Right Patterning: Breaking Symmetry to Asymmetric Morphogenesis.

Authors:  Daniel T Grimes; Rebecca D Burdine
Journal:  Trends Genet       Date:  2017-07-15       Impact factor: 11.639

7.  Loss-of-function mutations in growth differentiation factor-1 (GDF1) are associated with congenital heart defects in humans.

Authors:  J D Karkera; J S Lee; E Roessler; S Banerjee-Basu; M V Ouspenskaia; J Mez; E Goldmuntz; P Bowers; J Towbin; J W Belmont; A D Baxevanis; A F Schier; M Muenke
Journal:  Am J Hum Genet       Date:  2007-09-28       Impact factor: 11.025

8.  Animal left-right asymmetry.

Authors:  Martin Blum; Tim Ott
Journal:  Curr Biol       Date:  2018-04-02       Impact factor: 10.834

9.  Identification and functional characterization of NODAL rare variants in heterotaxy and isolated cardiovascular malformations.

Authors:  Bhagyalaxmi Mohapatra; Brett Casey; Hua Li; Trang Ho-Dawson; Liana Smith; Susan D Fernbach; Laura Molinari; Stephen R Niesh; John Lynn Jefferies; William J Craigen; Jeffrey A Towbin; John W Belmont; Stephanie M Ware
Journal:  Hum Mol Genet       Date:  2008-12-08       Impact factor: 6.150

10.  Left-right axis malformations associated with mutations in ACVR2B, the gene for human activin receptor type IIB.

Authors:  R Kosaki; M Gebbia; K Kosaki; M Lewin; P Bowers; J A Towbin; B Casey
Journal:  Am J Med Genet       Date:  1999-01-01
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  3 in total

1.  Genetic assimilation and the evolution of direction of genital asymmetry in anablepid fishes.

Authors:  Julián Torres-Dowdall; Sina J Rometsch; Jacobo Reyes Velasco; Gastón Aguilera; Andreas F Kautt; Guillermo Goyenola; Ana C Petry; Gabriel C Deprá; Weferson J da Graça; Axel Meyer
Journal:  Proc Biol Sci       Date:  2022-05-11       Impact factor: 5.530

2.  Functional Modules in Gametogenesis.

Authors:  Mariko Kikuchi; Minoru Tanaka
Journal:  Front Cell Dev Biol       Date:  2022-05-26

3.  Nodal asymmetry and hedgehog signaling during vertebrate left-right symmetry breaking.

Authors:  Maria Isabella Negretti; Nina Böse; Natalia Petri; Stanislav Kremnyov; Nikoloz Tsikolia
Journal:  Front Cell Dev Biol       Date:  2022-09-12
  3 in total

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