Literature DB >> 34903857

Imitation of β-lactam binding enables broad-spectrum metallo-β-lactamase inhibitors.

Jürgen Brem1, Tharindi Panduwawala2, Jon Ulf Hansen3, Joanne Hewitt4, Edgars Liepins5, Pawel Donets5, Laura Espina6, Alistair J M Farley2, Kirill Shubin5, Gonzalo Gomez Campillos2, Paula Kiuru7, Shifali Shishodia2,8, Daniel Krahn2, Robert K Leśniak2, Juliane Schmidt Adrian2, Karina Calvopiña2, María-Carmen Turrientes9, Madeline E Kavanagh2,10, Dmitrijs Lubriks5, Philip Hinchliffe11, Gareth W Langley2,12, Ali F Aboklaish6, Anders Eneroth13, Maria Backlund13, Andrei G Baran5, Elisabet I Nielsen14, Michael Speake4,15, Janis Kuka5, John Robinson4,15, Solveiga Grinberga5, Lindsay Robinson4,15, Michael A McDonough2, Anna M Rydzik2,16, Thomas M Leissing2, Juan Carlos Jimenez-Castellanos11,17, Matthew B Avison11, Solange Da Silva Pinto2, Andrew D Pannifer4, Marina Martjuga5, Emma Widlake6, Martins Priede5, Iva Hopkins Navratilova4, Marek Gniadkowski18, Anna Karin Belfrage19, Peter Brandt19,20, Jari Yli-Kauhaluoma7, Eric Bacque21, Malcolm G P Page22, Fredrik Björkling23, Jonathan M Tyrrell6,11, James Spencer11, Pauline A Lang2, Pawel Baranczewski24, Rafael Cantón9, Stuart P McElroy4,15, Philip S Jones4,15, Fernando Baquero9, Edgars Suna5, Angus Morrison4,15, Timothy R Walsh6, Christopher J Schofield25.   

Abstract

Carbapenems are vital antibiotics, but their efficacy is increasingly compromised by metallo-β-lactamases (MBLs). Here we report the discovery and optimization of potent broad-spectrum MBL inhibitors. A high-throughput screen for NDM-1 inhibitors identified indole-2-carboxylates (InCs) as potential β-lactamase stable β-lactam mimics. Subsequent structure-activity relationship studies revealed InCs as a new class of potent MBL inhibitor, active against all MBL classes of major clinical relevance. Crystallographic studies revealed a binding mode of the InCs to MBLs that, in some regards, mimics that predicted for intact carbapenems, including with respect to maintenance of the Zn(II)-bound hydroxyl, and in other regards mimics binding observed in MBL-carbapenem product complexes. InCs restore carbapenem activity against multiple drug-resistant Gram-negative bacteria and have a low frequency of resistance. InCs also have a good in vivo safety profile, and when combined with meropenem show a strong in vivo efficacy in peritonitis and thigh mouse infection models.
© 2021. The Author(s), under exclusive licence to Springer Nature Limited.

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Year:  2021        PMID: 34903857     DOI: 10.1038/s41557-021-00831-x

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  38 in total

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Authors:  David M Livermore; Rafael Canton; Marek Gniadkowski; Patrice Nordmann; Gian Maria Rossolini; Guillaume Arlet; Juan Ayala; Teresa M Coque; Izabela Kern-Zdanowicz; Francesco Luzzaro; Laurent Poirel; Neil Woodford
Journal:  J Antimicrob Chemother       Date:  2006-12-06       Impact factor: 5.790

Review 2.  Past and Present Perspectives on β-Lactamases.

Authors:  Karen Bush
Journal:  Antimicrob Agents Chemother       Date:  2018-09-24       Impact factor: 5.191

Review 3.  The road to avibactam: the first clinically useful non-β-lactam working somewhat like a β-lactam.

Authors:  David Yuxin Wang; Martine I Abboud; Marios S Markoulides; Jürgen Brem; Christopher J Schofield
Journal:  Future Med Chem       Date:  2016-06-21       Impact factor: 3.808

Review 4.  New β-Lactam-β-Lactamase Inhibitor Combinations.

Authors:  Dafna Yahav; Christian G Giske; Alise Grāmatniece; Henrietta Abodakpi; Vincent H Tam; Leonard Leibovici
Journal:  Clin Microbiol Rev       Date:  2020-11-11       Impact factor: 26.132

5.  Avibactam is a covalent, reversible, non-β-lactam β-lactamase inhibitor.

Authors:  David E Ehmann; Haris Jahić; Philip L Ross; Rong-Fang Gu; Jun Hu; Gunther Kern; Grant K Walkup; Stewart L Fisher
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-02       Impact factor: 11.205

6.  Emergence of a new antibiotic resistance mechanism in India, Pakistan, and the UK: a molecular, biological, and epidemiological study.

Authors:  Karthikeyan K Kumarasamy; Mark A Toleman; Timothy R Walsh; Jay Bagaria; Fafhana Butt; Ravikumar Balakrishnan; Uma Chaudhary; Michel Doumith; Christian G Giske; Seema Irfan; Padma Krishnan; Anil V Kumar; Sunil Maharjan; Shazad Mushtaq; Tabassum Noorie; David L Paterson; Andrew Pearson; Claire Perry; Rachel Pike; Bhargavi Rao; Ujjwayini Ray; Jayanta B Sarma; Madhu Sharma; Elizabeth Sheridan; Mandayam A Thirunarayan; Jane Turton; Supriya Upadhyay; Marina Warner; William Welfare; David M Livermore; Neil Woodford
Journal:  Lancet Infect Dis       Date:  2010-08-10       Impact factor: 25.071

Review 7.  Carbapenemase-Producing Organisms: A Global Scourge.

Authors:  Robert A Bonomo; Eileen M Burd; John Conly; Brandi M Limbago; Laurent Poirel; Julie A Segre; Lars F Westblade
Journal:  Clin Infect Dis       Date:  2018-04-03       Impact factor: 9.079

Review 8.  Inhibitors of metallo-β-lactamases.

Authors:  Caitlyn M Rotondo; Gerard D Wright
Journal:  Curr Opin Microbiol       Date:  2017-11-16       Impact factor: 7.934

9.  Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study.

Authors:  Yi-Yun Liu; Yang Wang; Timothy R Walsh; Ling-Xian Yi; Rong Zhang; James Spencer; Yohei Doi; Guobao Tian; Baolei Dong; Xianhui Huang; Lin-Feng Yu; Danxia Gu; Hongwei Ren; Xiaojie Chen; Luchao Lv; Dandan He; Hongwei Zhou; Zisen Liang; Jian-Hua Liu; Jianzhong Shen
Journal:  Lancet Infect Dis       Date:  2015-11-19       Impact factor: 25.071

10.  Emergence of plasmid-mediated high-level tigecycline resistance genes in animals and humans.

Authors:  Tao He; Ran Wang; Dejun Liu; Timothy R Walsh; Rong Zhang; Yuan Lv; Yuebin Ke; Quanjiang Ji; Ruicheng Wei; Zhihai Liu; Yingbo Shen; Gang Wang; Lichang Sun; Lei Lei; Ziquan Lv; Yun Li; Maoda Pang; Liyuan Wang; Qiaoling Sun; Yulin Fu; Huangwei Song; Yuxin Hao; Zhangqi Shen; Shaolin Wang; Gongxiang Chen; Congming Wu; Jianzhong Shen; Yang Wang
Journal:  Nat Microbiol       Date:  2019-05-27       Impact factor: 17.745

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  4 in total

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Authors:  Fredrika Rajer; Lisa Allander; Philip A Karlsson; Linus Sandegren
Journal:  Antimicrob Agents Chemother       Date:  2022-06-02       Impact factor: 5.938

Review 3.  Recent Developments to Cope the Antibacterial Resistance via β-Lactamase Inhibition.

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4.  Studies on the Reactions of Biapenem with VIM Metallo β-Lactamases and the Serine β-Lactamase KPC-2.

Authors:  Anka Lucic; Tika R Malla; Karina Calvopiña; Catherine L Tooke; Jürgen Brem; Michael A McDonough; James Spencer; Christopher J Schofield
Journal:  Antibiotics (Basel)       Date:  2022-03-16
  4 in total

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