Literature DB >> 34903652

Screening human lung cancer with predictive models of serum magnetic resonance spectroscopy metabolomics.

Tjada A Schult1,2, Mara J Lauer1,3, Yannick Berker4,5, Marcella R Cardoso1, Lindsey A Vandergrift1, Piet Habbel2, Johannes Nowak6, Matthias Taupitz2, Martin Aryee1, Mari A Mino-Kenudson1, David C Christiani7,8, Leo L Cheng7.   

Abstract

The current high mortality of human lung cancer stems largely from the lack of feasible, early disease detection tools. An effective test with serum metabolomics predictive models able to suggest patients harboring disease could expedite triage patient to specialized imaging assessment. Here, using a training-validation-testing-cohort design, we establish our high-resolution magic angle spinning (HRMAS) magnetic resonance spectroscopy (MRS)-based metabolomics predictive models to indicate lung cancer presence and patient survival using serum samples collected prior to their disease diagnoses. Studied serum samples were collected from 79 patients before (within 5.0 y) and at lung cancer diagnosis. Disease predictive models were established by comparing serum metabolomic patterns between our training cohorts: patients with lung cancer at time of diagnosis, and matched healthy controls. These predictive models were then applied to evaluate serum samples of our validation and testing cohorts, all collected from patients before their lung cancer diagnosis. Our study found that the predictive model yielded values for prior-to-detection serum samples to be intermediate between values for patients at time of diagnosis and for healthy controls; these intermediate values significantly differed from both groups, with an F1 score = 0.628 for cancer prediction. Furthermore, values from metabolomics predictive model measured from prior-to-diagnosis sera could significantly predict 5-y survival for patients with localized disease.

Entities:  

Keywords:  blood serum; high-resolution magic angle spinning; human lung cancer; magnetic resonance spectroscopy; metabolomics

Mesh:

Year:  2021        PMID: 34903652      PMCID: PMC8713787          DOI: 10.1073/pnas.2110633118

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


  11 in total

1.  Carnosine and cancer: a perspective.

Authors:  Frank Gaunitz; Alan R Hipkiss
Journal:  Amino Acids       Date:  2012-03-28       Impact factor: 3.520

2.  Individual variability in human blood metabolites identifies age-related differences.

Authors:  Romanas Chaleckis; Itsuo Murakami; Junko Takada; Hiroshi Kondoh; Mitsuhiro Yanagida
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-28       Impact factor: 11.205

Review 3.  Risk-Based lung cancer screening: A systematic review.

Authors:  Iakovos Toumazis; Mehrad Bastani; Summer S Han; Sylvia K Plevritis
Journal:  Lung Cancer       Date:  2020-07-12       Impact factor: 5.705

4.  Cancer statistics, 2020.

Authors:  Rebecca L Siegel; Kimberly D Miller; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2020-01-08       Impact factor: 508.702

Review 5.  Lung cancer LDCT screening and mortality reduction - evidence, pitfalls and future perspectives.

Authors:  Matthijs Oudkerk; ShiYuan Liu; Marjolein A Heuvelmans; Joan E Walter; John K Field
Journal:  Nat Rev Clin Oncol       Date:  2020-10-12       Impact factor: 66.675

6.  Carnosine may reduce lung injury caused by radiation therapy.

Authors:  Yildiz Guney; Ummuhani Ozel Turkcu; Ayse Hicsonmez; Meltem Nalca Andrieu; H Zafer Guney; Ayse Bilgihan; Cengiz Kurtman
Journal:  Med Hypotheses       Date:  2006-01-10       Impact factor: 1.538

7.  Comparison of squamous cell carcinoma and adenocarcinoma of the lung by metabolomic analysis of tissue-serum pairs.

Authors:  K W Jordan; C B Adkins; L Su; E F Halpern; E J Mark; D C Christiani; L L Cheng
Journal:  Lung Cancer       Date:  2009-06-25       Impact factor: 5.705

Review 8.  The carnitine system and cancer metabolic plasticity.

Authors:  Mariarosa Anna Beatrice Melone; Anna Valentino; Sabrina Margarucci; Umberto Galderisi; Antonio Giordano; Gianfranco Peluso
Journal:  Cell Death Dis       Date:  2018-02-14       Impact factor: 8.469

9.  Magnetic Resonance Spectroscopy-based Metabolomic Biomarkers for Typing, Staging, and Survival Estimation of Early-Stage Human Lung Cancer.

Authors:  Yannick Berker; Lindsey A Vandergrift; Isabel Wagner; Li Su; Johannes Kurth; Andreas Schuler; Sarah S Dinges; Piet Habbel; Johannes Nowak; Eugene Mark; Martin J Aryee; David C Christiani; Leo L Cheng
Journal:  Sci Rep       Date:  2019-07-16       Impact factor: 4.379

10.  Metabolomic Prediction of Human Prostate Cancer Aggressiveness: Magnetic Resonance Spectroscopy of Histologically Benign Tissue.

Authors:  Lindsey A Vandergrift; Emily A Decelle; Johannes Kurth; Shulin Wu; Taylor L Fuss; Elita M DeFeo; Elkan F Halpern; Matthias Taupitz; W Scott McDougal; Aria F Olumi; Chin-Lee Wu; Leo L Cheng
Journal:  Sci Rep       Date:  2018-03-26       Impact factor: 4.379

View more
  4 in total

Review 1.  Cancer insights from magnetic resonance spectroscopy of cells and excised tumors.

Authors:  Marie-France Penet; Raj Kumar Sharma; Santosh Bharti; Noriko Mori; Dmitri Artemov; Zaver M Bhujwalla
Journal:  NMR Biomed       Date:  2022-03-09       Impact factor: 4.478

2.  The Roles of Blood Lipid-Metabolism Genes in Immune Infiltration Could Promote the Development of IDD.

Authors:  Weihang Li; Ziyi Ding; Huan Zhang; Quan Shi; Dong Wang; Shilei Zhang; Songjie Xu; Bo Gao; Ming Yan
Journal:  Front Cell Dev Biol       Date:  2022-02-09

3.  A Nuclear Magnetic Resonance Spectroscopy Method in Characterization of Blood Metabolomics for Alzheimer's Disease.

Authors:  JianXiang Weng; Isabella H Muti; Anya B Zhong; Pia Kivisäkk; Bradley T Hyman; Steven E Arnold; Leo L Cheng
Journal:  Metabolites       Date:  2022-02-15

Review 4.  NMR and Metabolomics-A Roadmap for the Future.

Authors:  David S Wishart; Leo L Cheng; Valérie Copié; Arthur S Edison; Hamid R Eghbalnia; Jeffrey C Hoch; Goncalo J Gouveia; Wimal Pathmasiri; Robert Powers; Tracey B Schock; Lloyd W Sumner; Mario Uchimiya
Journal:  Metabolites       Date:  2022-07-23
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.