| Literature DB >> 34897565 |
Cristina Grippaudo1,2, Isabella D'Apolito1, Concetta Cafiero3, Agnese Re4, Pietro Chiurazzi5,6, Sylvia A Frazier-Bowers7.
Abstract
BACKGROUND: Primary failure of eruption (PFE) is a hereditary condition, and linkage with variants in the PTH1R gene has been demonstrated in many cases. The clinical severity and expression of PFE is variable, and the genotype-phenotype correlation remains elusive. Further, the similarity between some eruption disorders that are not associated with PTH1R alterations is striking. To better understand the genotype-phenotype correlation, we examined the relationship between the eruption phenotype and PTH1R genotype in 44 patients with suspected PFE and 27 unaffected relatives. Sanger sequencing was employed to analyze carefully selected PFE patients. Potential pathogenicity of variants was evaluated against multiple genetic databases for function prediction and frequency information.Entities:
Keywords: Dental eruption; Orthodontics; PFE diagnosis; PTH1R gene; Primary failure of eruption
Mesh:
Substances:
Year: 2021 PMID: 34897565 PMCID: PMC8666410 DOI: 10.1186/s40510-021-00387-z
Source DB: PubMed Journal: Prog Orthod ISSN: 1723-7785 Impact factor: 2.750
Clinical signs in patients with PTH1R variants that are likely pathogenic (nonsense, frameshift and missense)
| Patient ID | Age and dentition | 1. | 2. | 3. | 4. | 5. | 6. | 7. asymmetry due to bilaterally unbalanced eruption of the teeth | 8. affected individual presents with a bi-lateral affection of PFE | 9. affected molars are located in the basal bone of the jaws | 10. affected molars show dilacerated roots |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 3* | 8 mix | x | x | x | x | x | x | x | x | ||
| 4* | 17 perm | x | x | x | x | x | x | x | x | x | |
| 29 | 45 perm | x | x | x | |||||||
| 5* | 22 perm | x | x | x | x | x | x | x | |||
| 16 | 45 perm | ||||||||||
| 12* | 14 perm | x | x | x | x | x | x | ||||
| 11* | 43 perm | x | x | x | x | x | x | x | |||
| 14* | 15 perm | x | x | x | x | x | x | x | |||
| 15* | 12 perm | x | x | x | x | x | x | x | |||
| 17* | 6 mix | x | x | x | x | x | x | ||||
| 19 | 7 mix | x | x deciduous only | x |
The hallmark signs (key PFE traits) are italics and listed first, from 1 to 6
Patients marked by * showed at least 5 hallmark signs
Clinical signs in patients with PTH1R variants that are likely benign (synonymous and intronic)
| Patient ID | Age and dentition | 1. | 2. | 3. | 4. | 5. | 6. | 7. asymmetry due to bilaterally unbalanced eruption of the teeth | 8. affected individual presents with a bi-lateral affection of PFE | 9. affected molars are located in the basal bone of the jaws | 10. affected molars show dilacerated roots |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 18 perm | x | x | x | x | ||||||
| 2* | 8 mix | x | x | x | x | x | x | x | |||
| 6 | 8 mix | x | x | x | x | x | x | ||||
| 7 | 8 mix | x | x | x | x | x | x | ||||
| 8* | 16 mix | x | x | x | x | x | x | x | |||
| 9 | 8 mix | x | x | x | x | x | x | ||||
| 10* | 17 perm | x | x | x | x | x | x | x | x | ||
| 13 | 12 perm | x | x | x | x | ||||||
| 18 | 6 mix | x | x | x | x | x | x | ||||
| 22 | 17 perm | x | x | x | x | ||||||
| 24 | 11 mix | x | x | x | x | x | |||||
| 30 | 14 perm | x | x | x | |||||||
| 72 | 12 perm | x | x | x | x | x | x | x | |||
| 20 | 12 mix | x | x | ||||||||
| 23 | 15 perm | x | x | x | x | ||||||
| 37 | 8 mix | x | x | x dec. only | |||||||
| 43 | 12 perm | x | |||||||||
| 47 | 7 mix | x | x dec. only | x | |||||||
| 49 | 10 mix | x | x dec. only |
The hallmark signs (key PFE traits) are italics and listed first, from 1 to 6
Patients marked by * showed at least 5 hallmark signs
Clinical signs in patients without PTH1R variants
| Patient ID | Age and dentition | 1. | 2. | 3. | 4. | 5. | 6. | 7. asymmetry due to bilaterally unbalanced eruption of the teeth | 8. affected individual presents with a bi-lateral affection of PFE | 9. affected molars are located in the basal bone of the jaws | 10. affected molars show dilacerated roots |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 39 | 5,3 mix | x | x | ||||||||
| 40 | 6,1 mix | x | x | ||||||||
| 41 | 8 mix | x | x | ||||||||
| 42 | 13 perm | x | x | ||||||||
| 62 | 13 mix | ||||||||||
| 44 | 10,5 mix | x | x | ||||||||
| 45 | 15 perm | x | x | x | x | ||||||
| 52 | 13 mix | x | x | ||||||||
| 50 | 6,3 mix | x | x | ||||||||
| 55 | 8 mix | x | x | ||||||||
| 71* | 19 perm | x | x | x | x | x | x | x | |||
| 64 | 14 mix | x | x | ||||||||
| 65 | 8,8 mix | x | x | ||||||||
| 36 | 13 perm | x | x | x | |||||||
| 31 | 14 perm | x | x | x | |||||||
| 35 | 14 perm | x | x | x | |||||||
| 51 | 13 perm | x | x | x | x |
The hallmark signs (key PFE traits) are italics and listed first, from 1 to 6
Patients marked by * showed at least 5 hallmark signs
Primers employed for sequencing PTH1R coding exons
| Primer sequence | |
|---|---|
| 3 FORWARD | 5′-AGCCTGACGCAGCTCTGCA-3′ |
| 3 REVERSE | 5′-CCCACAGTCCAGACATCCCA-3′ |
| 4 FORWARD | 5′-AGAGCAGATTCCCCACATGC-3′ |
| 4 REVERSE | 5′-TTCACCTGGCTCTGTATCCT-3′ |
| 5 FORWARD | 5′-TCCTCACCCATCGTCTCAGAT-3′ |
| 5 REVERSE | 5′-AAGAGCCAAGAAGCATGAGC-3′ |
| 6 FORWARD | 5′-AGATGTATTCATCCTTCTGGG-3′ |
| 7 REVERSE | 5′-TAAGGTTGCTGGAGGAGTCAAG-3′ |
| 8 FORWARD | 5′-AAATTCACTCCCACCCCACG-3′ |
| 8 REVERSE | 5′-TGGACAGGAAGCTGGGTTGT-3′ |
| 9 FORWARD | 5′-ACAACCCAGCTTCCTGTCCA-3′ |
| 9 REVERSE | 5′-GTTGCGAGGGACCCTATAAG-3′ |
| 10 FORWARD | 5′-AAACGAAGCCTGCCCCTTC-3′ |
| 10 REVERSE | 5′-GCCTGGAATAGGGTCAGGAT-3′ |
| 11 FORWARD | 5′-GGAATGACCTTGTGGACAGC-3′ |
| 11 REVERSE | 5′-TAGCTGTTGAGGACACAGGG-3′ |
| 12 FORWARD | 5′-AGGGTCACAGGAGGCTACTT-3′ |
| 12 REVERSE | 5′-TGTCACTGCATCTCTGGGTG-3′ |
| 13 FORWARD | 5′-CCAGCCCAGAAAGGAAAACC-3′ |
| 13 REVERSE | 5′-TAGTGCAGGGCCTGGTACAA-3′ |
| 14 FORWARD | 5′-AGGTGAACTGGGTTGTCCTC-3′ |
| 15 REVERSE | 5′-GAATGTCCTCAGGGGTGTTC-3′ |
| 16 FORWARD | 5′-CACTTGGCCTTGGAGTTTCC-3′ |
| 16 REVERSE | 5′-CCACCCATCTTTTGGTCC-3′ |
PTH1R variants found in our cohort with their cDNA and genomic location, predicted effect and classification, CADD scores for exonic variants, and frequency in gnomAD
Fig. 1Clinical features and genetic findings of patient 5 with PFE and a PTH1R nonsense variant
Fig. 2Clinical features and genetic findings of patient 8 with PFE and both a synonymous and an intronic PTH1R variant
Fig. 3Clinical features and genetic findings of patient 2 with PFE and a synonymous PTH1R variant
Fig. 4Clinical features and genetic findings of patient 10 with PFE and an intronic PTH1R variant
Fig. 5Clinical features and genetic findings of patient 71 with PFE but without PTH1R variants
Fig. 6Statistical analysis and significant association of 5 or more PFE key traits (hallmark signs) with (likely) pathogenic PTH1R variants