| Literature DB >> 34894680 |
Yuanfei Xue1, Jia-Ning Wang1, Wenxin Hu2, Jun Zheng2, Yongle Li3, Xiaoliang Pan4, Yan Mo1,5,6, Yihan Shao4, Lu Wang7, Ye Mei1,5,6.
Abstract
Path integral molecular dynamics (PIMD) is becoming a routinely applied method for incorporating the nuclear quantum effect in computer simulations. However, direct PIMD simulations at an ab initio level of theory are formidably expensive. Using the protonated 1,8-bis(dimethylamino)naphthalene molecule as an example, we show in this work that the computational expense for the intramolecular proton transfer between the two nitrogen atoms can be remarkably reduced by implementing the idea of reference-potential methods. The simulation time can be easily extended to a scale of nanoseconds while maintaining the accuracy on an ab initio level of theory for thermodynamic properties. In addition, postprocessing can be carried out in parallel on massive computer nodes. A 545-fold reduction in the total CPU time can be achieved in this way as compared to a direct PIMD simulation at the same ab initio level of theory.Entities:
Year: 2021 PMID: 34894680 PMCID: PMC9108008 DOI: 10.1021/acs.jpca.1c07727
Source DB: PubMed Journal: J Phys Chem A ISSN: 1089-5639 Impact factor: 2.944