Literature DB >> 34870720

Draft genome sequence of the cyanobacterium Sphaerospermopsis aphanizomenoides BCCUSP55 from the Brazilian semiarid region reveals potential for anti-cancer applications.

Adriana Sturion Lorenzi1,2, Maria Letícia Bonatelli3, Alessandro M Varani4, Maria Carolina Quecine3, Maria do Carmo Bittencourt-Oliveira5.   

Abstract

Sphaerospermopsis aphanizomenoides is a filamentous nitrogen-fixing and bloom-forming cyanobacterium, which biomass can fertilize natural water with nutrients, especially through nitrogen fixation. The Sphaerospermopsis aphanizomenoides strain BCCUSP55 was previously isolated from a water supply reservoir in the Brazilian semiarid region, and its draft genome assembly coupled with the gene contents are reported here. The obtained BCCUSP55 draft genome comprised 254 scaffolds with a genome size estimated of 6,096,273 bp. In addition, it has 5250 predicted coding sequences (CDS) and the G + C content is 38.5%. Further, the BCCUSP55 draft genome presented the putative nocuolin A gene complete cluster, a natural oxadiazine that triggers apoptosis in human cancer cells. Thus, our results contribute to extend the knowledge on the genus Sphaerospermopsis and reveal its biotechnological potential.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Anti-cancer drugs; Biotechnology; Nitrogen fixation; Secondary metabolites

Mesh:

Year:  2021        PMID: 34870720     DOI: 10.1007/s00203-021-02602-1

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  17 in total

1.  SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.

Authors:  Anton Bankevich; Sergey Nurk; Dmitry Antipov; Alexey A Gurevich; Mikhail Dvorkin; Alexander S Kulikov; Valery M Lesin; Sergey I Nikolenko; Son Pham; Andrey D Prjibelski; Alexey V Pyshkin; Alexander V Sirotkin; Nikolay Vyahhi; Glenn Tesler; Max A Alekseyev; Pavel A Pevzner
Journal:  J Comput Biol       Date:  2012-04-16       Impact factor: 1.479

2.  Kinetic study of esterification by immobilized lipase in n-hexane.

Authors:  W Chulalaksananukul; J S Condoret; P Delorme; R M Willemot
Journal:  FEBS Lett       Date:  1990-12-10       Impact factor: 4.124

Review 3.  Cyanobacterial bioactive metabolites-A review of their chemistry and biology.

Authors:  I-Shuo Huang; Paul V Zimba
Journal:  Harmful Algae       Date:  2019-02-22       Impact factor: 4.273

4.  Methods for detection of anatoxin-a(s) by liquid chromatography coupled to electrospray ionization-tandem mass spectrometry.

Authors:  Felipe Augusto Dörr; Vania Rodríguez; Renato Molica; Peter Henriksen; Bernd Krock; Ernani Pinto
Journal:  Toxicon       Date:  2009-07-24       Impact factor: 3.033

5.  Fatty acid activation in cyanobacteria mediated by acyl-acyl carrier protein synthetase enables fatty acid recycling.

Authors:  Danuta Kaczmarzyk; Martin Fulda
Journal:  Plant Physiol       Date:  2010-01-08       Impact factor: 8.340

6.  NrrA, a nitrogen-responsive response regulator facilitates heterocyst development in the cyanobacterium Anabaena sp. strain PCC 7120.

Authors:  Shigeki Ehira; Masayuki Ohmori
Journal:  Mol Microbiol       Date:  2006-03       Impact factor: 3.501

7.  Guanitoxin, re-naming a cyanobacterial organophosphate toxin.

Authors:  Marli Fátima Fiore; Stella Thomaz de Lima; Wayne W Carmichael; Shaun M K McKinnie; Jonathan R Chekan; Bradley S Moore
Journal:  Harmful Algae       Date:  2020-01-14       Impact factor: 4.273

8.  Nanoparticle-modified PMMA to prevent denture stomatitis: a systematic review.

Authors:  Amanda Aparecida Maia Neves Garcia; Carolina Yoshi Campos Sugio; Lucas José de Azevedo-Silva; Anna Clara Gurgel Gomes; André Ulisses Dantas Batista; Vinicius Carvalho Porto; Simone Soares; Karin Hermana Neppelenbroek
Journal:  Arch Microbiol       Date:  2021-12-24       Impact factor: 2.552

9.  antiSMASH 6.0: improving cluster detection and comparison capabilities.

Authors:  Kai Blin; Simon Shaw; Alexander M Kloosterman; Zach Charlop-Powers; Gilles P van Wezel; Marnix H Medema; Tilmann Weber
Journal:  Nucleic Acids Res       Date:  2021-07-02       Impact factor: 16.971

Review 10.  A Metagenomic Approach to Cyanobacterial Genomics.

Authors:  Danillo O Alvarenga; Marli F Fiore; Alessandro M Varani
Journal:  Front Microbiol       Date:  2017-05-09       Impact factor: 5.640

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