| Literature DB >> 34867951 |
Xi Jia1, Tianyu Zhai1,2, Jin-An Zhang1.
Abstract
Autoimmune thyroid diseases (AITDs) are chronic organ-specific autoimmune diseases, mainly including Graves' disease (GD) and Hashimoto's thyroiditis (HT). Exosomes, as extracellular vesicles, contain a variety of biologically active substances that play a role in information exchange, thereby affecting the occurrence and progression of diseases. However, it is unclear whether exosomes are involved in the pathogenesis of AITDs. In this study, the role of exosomes in AITDs was explored from a proteomics perspective. Plasma exosomes were isolated from 12 patients with GD, 10 patients with HT, and seven normal controls (NC). Protein profiles were detected using the data-independent acquisition (DIA) method and analyzed to investigate changes in plasma exosome proteins. In the setting of GD, 11 proteins were upregulated while 197 proteins were downregulated compared with healthy people. Among them, MAP1S (log2 FC = 4.669, p = 0.009) and VAMP8 (log2 FC = 3.216, p = 0.003) were the most significantly upregulated, and RSU1 (log2 FC = -6.797, p = 0.001), ACTB (log2 FC = -4.795, p < 0.001), and CXCL7 (log2 FC = -4.674, p < 0.001) were the most significantly downregulated. In the cases of HT, HGFL (log2 FC = 2.766, p = 0.001), FAK1 (log2 FC = 2.213, p < 0.001), and PTN12 (log2 FC = 1.624, p < 0.001) were significantly upregulated, while PSMF1 (log2 FC = -3.591, p < 0.001), PXL2B (log2 FC = -2.622, p = 0.001), and CYTM (log2 FC = -1.609, p < 0.001) were the most downregulated. These differential proteins were mainly enriched in the immune system and metabolic system, indicating that plasma exosomes may play an important role in systemic immune imbalance in AITDs.Entities:
Keywords: Graves’ disease; Hashimoto’s thyroiditis (HT); autoimmune thyroid diseases (AITDs); exosome; proteomics
Mesh:
Substances:
Year: 2021 PMID: 34867951 PMCID: PMC8636008 DOI: 10.3389/fimmu.2021.730089
Source DB: PubMed Journal: Front Immunol ISSN: 1664-3224 Impact factor: 7.561
Clinical characteristics of all subjects.
| HT | GD | NC | |||
|---|---|---|---|---|---|
| Total | NG | RG | |||
| Sample size (n) | 10 | 12 | 7 | 5 | 7 |
| Sample ID | 1–10 | 11–22 | 11–17 | 18–22 | 23–29 |
| Gender (n; male/female) | 5/5 | 5/7 | 3/4 | 2/3 | 3/4 |
| Age (year) | 35.8 ± 9.2 | 41.4 ± 6.3 | 37.4 ± 3.7 | 45.4 ± 5.53 | 38.4 ± 9.2 |
| Duration (year) | 4.2 ± 2.1 | 2.2 ± 2.8 | 0 | 5.2 ± 1.6 | N/A |
| Family history (n; male/female) | 3/3 | 3/5 | 1/3 | 2/2 | N/A |
| GO (n; male/female) | 0/0 | 2/2 | 1/1 | 1/1 | N/A |
| Goiter degree (n; male/female) | |||||
| ≤I | 4/5 | 2/2 | 1/1 | 1/1 | 3/4 |
| ≥II | 0/1 | 3/5 | 2/3 | 1/2 | 0/0 |
| TRAb (IU/L) | 2.4 ± 0.9 | 16.7 ± 6.6 | 17.7 ± 6.9 | 15.3 ± 5.0 | 11.32 ± 7.5 |
| TPOAb (IU/ml) | 899.6 ± 210.3 | 491.5 ± 368.9 | 414.7 ± 334.1 | 599.1 ± 358.1 | 228.3 ± 263.4 |
| TGAb (IU/ml) | 538.3 ± 245.2 | 688.1 ± 1,028.8 | 452.2 ± 220.9 | 1,018.4 ± 1,508.3 | 843.7 ± 1,182 |
| FT3 (pmol/L) | 3.7 ± 2.8 | 18.8 ± 13.8 | 22.2 ± 11.9 | 14.1 ± 15.0 | 16.67 ± 14.9 |
| FT4 (pmol/L) | 14.8 ± 5.6 | 39.0 ± 23.3 | 41.3 ± 12.0 | 35.81 ± 32.55 | 39.4 ± 30.3 |
| TSH (µIU/ml) | 3.5 ± 1.3 | 0 ± 0.01 | 0 ± 0.01 | 0.00 ± 0.00 | 0.2 ± 0.2 |
The continuous variables are shown in mean ± SD.
HT, Hashimoto’s thyroiditis; NG, newly diagnosed Grave’s disease; RG, refractory Grave’s disease; NC, normal control; GO, Grave’s ophthalmopathy; TSH, thyroid-stimulating hormone; TRAb, TSH receptor antibody; TPOAb, thyroid peroxidase antibody; TGAb, thyroglobulin antibody; FT3, free triiodothyronine; FT4, free thyroxine.
Statistics of differential proteins between total patients with GD and healthy controls.
| Protein name | Accession number | log2 FC |
|
| Class |
|---|---|---|---|---|---|
| Microtubule-associated protein 1S (MAP1S) | Q66K74 | 4.669 | 0.009 | 0.004 | Up |
| Vesicle-associated membrane proteins 8 (VAMP8) | Q9BV40 | 3.961 | 0.001 | 0.002 | Up |
| Eukaryotic translation initiation factor 5 (IF5) | P55010 | 2.590 | 0.024 | 0.033 | Up |
| Pulmonary surfactant-associated protein B (PSPB) | P07988 | 2.469 | 0.009 | 0.030 | Up |
| Fibrinogen-like protein 1 (FGL1) | Q08830 | 1.908 | 0.014 | 0.040 | Up |
| Acid ceramidase (ASAH1) | Q13510 | 1.664 | 0.007 | 0.023 | Up |
| Peroxidasin homolog (PXDN) | Q92626 | 1.648 | 0.016 | 0.035 | Up |
| Sex hormone-binding globulin (SHBG) | P04278 | 1.595 | 0.038 | 0.048 | Up |
| ATP-binding cassette sub-family F member 2 (ABCF2) | Q9UG63 | 1.247 | 0.011 | 0.036 | Up |
| Insulin-like growth factor-binding protein 2 (IBP2) | P18065 | 1.019 | 0.035 | 0.043 | Up |
| Ras suppressor protein 1 (RSU1) | Q15404 | −6.797 | <0.001 | 0.010 | Down |
| Actin, cytoplasmic 1 (ACTB) | P60709 | −4.795 | <0.001 | 0.010 | Down |
| Platelet basic protein (CXCL7) | P02775 | −4.674 | <0.001 | 0.010 | Down |
|
| P00338 | −2.904 | <0.001 | 0.010 | Down |
| Dopamine beta-hydroxylase (DOPO) | P09172 | −2.151 | <0.001 | 0.005 | Down |
| Desmocollin-3 (DSC3) | Q14574 | −1.846 | <0.001 | 0.008 | Down |
| Clusterin (CLUS) | P10909 | −1.211 | <0.001 | 0.001 | Down |
| Kallistatin (KAIN) | P29622 | −1.117 | <0.001 | <0.001 | Down |
| Cartilage acidic protein 1 (CRAC1) | Q9NQ79 | −1.084 | <0.001 | 0.010 | Down |
| C4b-binding protein beta chain (C4BPB) | P20851 | −1.065 | <0.001 | 0.010 | Down |
Q value means that the p-value is adjusted for the false discovery rate (FDR). All proteins in the table were screened based on both p-value and Q value <0.5. Only the 10 most upregulated and 10 most downregulated differential proteins are listed.
GD, Graves’ disease.
Figure 1Clustering heat map of differential proteins between AITD and NC groups (A), NG group vs. NC group (B), NG group vs. RG group (C), and HT group vs. NC group (D). NG group vs. RG group vs. HT group vs. NC group. AITD, autoimmune thyroid disease; NC, normal control; NG, newly diagnosed Grave’s disease; RG, refractory Grave’s disease; HT, Hashimoto’s thyroiditis.
Statistics of differential proteins between patients with HT and healthy controls.
| Protein name | Accession number | log2 FC |
|
| Class |
|---|---|---|---|---|---|
| Hepatocyte growth factor-like protein (HGFL) | P26927 | 2.766 | 0.001 | 0.036 | Up |
| Focal adhesion kinase 1 (FAK1) | Q05397 | 2.213 | <0.001 | 0.015 | Up |
| Fibrillin-1 (FBN1) | P35555 | 1.745 | <0.001 | 0.017 | Up |
| Tyrosine-protein phosphatase non-receptor type 12 (PTN12) | Q05209 | 1.624 | <0.001 | 0.021 | Up |
| Acidic fibroblast growth factor intracellular-binding protein (FIBP) | O43427 | 1.408 | <0.001 | 0.023 | Up |
| Complement C1q subcomponent subunit B (C1QB) | P02746 | 1.048 | <0.001 | 0.015 | Up |
| Complement C1q subcomponent subunit C (C1QC) | P02747 | 1.029 | <0.001 | 0.008 | Up |
| Proteasome inhibitor PI31 subunit (PSMF1) | Q92530 | −3.591 | <0.001 | 0.012 | Down |
| Prostamide/prostaglandin F synthase (PXL2B) | Q8TBF2 | −2.622 | 0.001 | 0.037 | Down |
| Cystatin-M (CYTM) | Q15828 | −1.609 | <0.001 | 0.021 | Down |
| Serotransferrin (TRFE) | P02787 | −1.009 | <0.001 | 0.016 | Down |
| Alpha-2-HS-glycoprotein (FETUA) | P02765 | −1.088 | <0.001 | 0.021 | Down |
| Extracellular matrix protein 1 (ECM1) | Q16610 | −1.129 | <0.001 | 0.021 | Down |
| Albumin (ALBU) | P02768 | −1.015 | <0.001 | 0.023 | Down |
| Beta-2-glycoprotein 1 (APOH) | P02749 | −1.047 | <0.001 | 0.030 | Down |
| Serum paraoxonase/arylesterase 1 (PON1) | P27169 | −1.240 | 0.001 | 0.032 | Down |
Q value means that the p-value is adjusted for the false discovery rate (FDR). All proteins in the table were screened based on both p-value and Q value <0.5.
HT, Hashimoto’s thyroiditis.
Figure 2Function analysis of differential proteins between total GD and NC groups. (A) KEGG enrichment analysis. (B) GO analysis for upregulated and downregulated proteins. GD, Graves’ disease; NC, normal control; KEGG, Kyoto Encyclopedia of Genes and Genomes; GO, Gene Ontology.
Figure 3Function analysis of differential proteins between HT and NC groups. (A) KEGG enrichment analysis. (B) GO analysis for upregulated and downregulated proteins. HT, Hashimoto’s thyroiditis; NC, normal control; KEGG, Kyoto Encyclopedia of Genes and Genomes; GO, Gene Ontology.