Literature DB >> 3486673

Transition-state stabilization by adenosine deaminase: structural studies of its inhibitory complex with deoxycoformycin.

L Frick, R Wolfenden, E Smal, D C Baker.   

Abstract

Experiments with radioactive deoxycoformycin indicate that the inhibitor is released from calf intestinal adenosine deaminase after the enzyme-inhibitor complex is disrupted by denaturation. Experiments with 2H2O and H218O indicate that the enzyme does not catalyze elimination-addition reactions that could have led to reversible covalent derivatization of the enzyme. Ultraviolet difference spectra and the influence of pH on inhibitor binding indicate that deoxycoformycin is bound intact as the neutral species, at a binding site that is less polar than solvent water. The enzyme-inhibitor complex appears to be held together by hydrogen bonds of extraordinary stability (ca. 10 kcal/mol). These results suggest that deamination proceeds by direct water attack, the enzyme acting as a general-base catalyst.

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Year:  1986        PMID: 3486673     DOI: 10.1021/bi00355a025

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  4 in total

1.  The role of divalent cations in structure and function of murine adenosine deaminase.

Authors:  B F Cooper; V Sideraki; D K Wilson; D Y Dominguez; S W Clark; F A Quiocho; F B Rudolph
Journal:  Protein Sci       Date:  1997-05       Impact factor: 6.725

2.  Mixed inhibition of adenosine deaminase activity by 1,3-dinitrobenzene: a model for understanding cell-selective neurotoxicity in chemically-induced energy deprivation syndromes in brain.

Authors:  Yipei Wang; Xin Liu; Brandon Schneider; Elaina A Zverina; Kristen Russ; Sanjeeva J Wijeyesakere; Carol A Fierke; Rudy J Richardson; Martin A Philbert
Journal:  Toxicol Sci       Date:  2011-11-21       Impact factor: 4.849

3.  Effects of substitutions at the 4' and 2 positions on the bioactivity of 4'-ethynyl-2-fluoro-2'-deoxyadenosine.

Authors:  Karen A Kirby; Eleftherios Michailidis; Tracy L Fetterly; Musetta A Steinbach; Kamalendra Singh; Bruno Marchand; Maxwell D Leslie; Ariel N Hagedorn; Eiichi N Kodama; Victor E Marquez; Stephen H Hughes; Hiroaki Mitsuya; Michael A Parniak; Stefan G Sarafianos
Journal:  Antimicrob Agents Chemother       Date:  2013-10-07       Impact factor: 5.191

4.  Reactivity of damaged pyrimidines: DNA cleavage via hemiaminal formation at the C4 positions of the saturated thymine of spore photoproduct and dihydrouridine.

Authors:  Gengjie Lin; Yajun Jian; Karl J Dria; Eric C Long; Lei Li
Journal:  J Am Chem Soc       Date:  2014-09-04       Impact factor: 15.419

  4 in total

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